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The map label for this gene is asnC [H]

Identifier: 162146444

GI number: 162146444

Start: 630484

End: 630960

Strand: Direct

Name: asnC [H]

Synonym: GDI_0620

Alternate gene names: 162146444

Gene position: 630484-630960 (Clockwise)

Preceding gene: 162146443

Following gene: 162146446

Centisome position: 15.99

GC content: 51.99

Gene sequence:

>477_bases
ATGGCGGTATCAATCACCCCGACCCTGGACGCTATCGACAGGAACATCATCCGGATCCTGGCCGAAGATGGACGGTTGCC
CATTTCCGATCTCGCCCAGGCGGTGAATATCAGTGCGGCGACATGCTTCCGCCGAGTCCAGCGCCTGGTGGACCGCGGGG
TCATCCTGAAATTCAGCGCGATCCTCAATCAGCCCATGATCAATCGCGGCGCCCTTGTCCTCGTCGGGGTCTGCCTGGAC
GGCTTGAACAACATCAATCTTGATACGTTCGAAACCGCCGTAAAGAAAATCGGAATGGTGACGGATTGTTATCTCGTGTC
CGGAGAATTCGACTATTTTCTAAAAATAAGAGCGGAAGATATTTATCAATTTAATGCAATGCACAGTGAATATCTCATGT
CTCTTCCCGGCATACGCCGCACACGAACATTCATCTGCCTCAAGGAGGTGCTGGATAATCATAACCCCCCATTGTAG

Upstream 100 bases:

>100_bases
AATCGGTATGAAAGGTGCGTTCATTTTAAAATCGATTTTATATCGATCTTTGCAGGTGGAACCGAAAAATTGCGCTTTTC
CTCACCTTCCGAAAGATAGC

Downstream 100 bases:

>100_bases
GGGACGTATCTGGAAATGCGCACCGGCAGCGCTCCGACGCGCGTTTGCTTCGCATCGCTGCGCATGCCAATCGACGAATA
CACAACCGCGCCGCCAGATA

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 157

Protein sequence:

>158_residues
MAVSITPTLDAIDRNIIRILAEDGRLPISDLAQAVNISAATCFRRVQRLVDRGVILKFSAILNQPMINRGALVLVGVCLD
GLNNINLDTFETAVKKIGMVTDCYLVSGEFDYFLKIRAEDIYQFNAMHSEYLMSLPGIRRTRTFICLKEVLDNHNPPL

Sequences:

>Translated_158_residues
MAVSITPTLDAIDRNIIRILAEDGRLPISDLAQAVNISAATCFRRVQRLVDRGVILKFSAILNQPMINRGALVLVGVCLD
GLNNINLDTFETAVKKIGMVTDCYLVSGEFDYFLKIRAEDIYQFNAMHSEYLMSLPGIRRTRTFICLKEVLDNHNPPL
>Mature_157_residues
AVSITPTLDAIDRNIIRILAEDGRLPISDLAQAVNISAATCFRRVQRLVDRGVILKFSAILNQPMINRGALVLVGVCLDG
LNNINLDTFETAVKKIGMVTDCYLVSGEFDYFLKIRAEDIYQFNAMHSEYLMSLPGIRRTRTFICLKEVLDNHNPPL

Specific function: Mediates a global response to leucine. Exogenous leucine affects the expression of a number of different operons; lrp mediates this effect for at least some of these operons. For example it is regulator of the branched-chain amino acid transport genes [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787116, Length=142, Percent_Identity=38.7323943661972, Blast_Score=109, Evalue=1e-25,
Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=24.6666666666667, Blast_Score=74, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 17714; Mature: 17583

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVSITPTLDAIDRNIIRILAEDGRLPISDLAQAVNISAATCFRRVQRLVDRGVILKFSA
CEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCHHEEHHH
ILNQPMINRGALVLVGVCLDGLNNINLDTFETAVKKIGMVTDCYLVSGEFDYFLKIRAED
HHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHEEEECCCCEEEEEEEHHH
IYQFNAMHSEYLMSLPGIRRTRTFICLKEVLDNHNPPL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
AVSITPTLDAIDRNIIRILAEDGRLPISDLAQAVNISAATCFRRVQRLVDRGVILKFSA
EEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHCCHHEEHHH
ILNQPMINRGALVLVGVCLDGLNNINLDTFETAVKKIGMVTDCYLVSGEFDYFLKIRAED
HHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCHHHEEEECCCCEEEEEEEHHH
IYQFNAMHSEYLMSLPGIRRTRTFICLKEVLDNHNPPL
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]