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The map label for this gene is 162146423

Identifier: 162146423

GI number: 162146423

Start: 604148

End: 605380

Strand: Reverse

Name: 162146423

Synonym: GDI_0598

Alternate gene names: NA

Gene position: 605380-604148 (Counterclockwise)

Preceding gene: 162146424

Following gene: 162146422

Centisome position: 15.35

GC content: 67.15

Gene sequence:

>1233_bases
ATGGGGGAGATCATGATCCCGTCCGTCTATCTTCTGGGAACGGCGGATACCAAGTTCGCGGAACTGGACTATCTGCGATC
GGTCCTGACCGGACGGGGCGTCGGCAGCCATATCGTGGATGTCGGCACCCGCGAGGACCCGTGCGCCGCCGACATCACCG
CGCGACAGGTGGCGGCCTGCCACCCCGATGGCGCTGCCGCGGTCTTCTGCGGCGAGCGCGGGCGCGCCATCGCGGCGATG
TCCGAGGCGCTGCGGCGTTTCCTGCCGGGCCGCGCCGACCTGGCCGGCGTGATCGCGATCGGCGGCTCCGGCGGCACGGC
CCTTGTCGCGCCGGCCCTGCAGGACCTGCCGATCGGCCTGCCCAAGATCCTGGTTTCCACCGTCGCATCGGGAAACGTGG
CGCCCTATGTGGGCGAATCCGATCTGTCCATGGTCTATTCGGTCGTCGACCTTCAGGGGCTGAACCGTATTTCGCGCACC
ATCCTGGCCAACGCCGCCAACGCCATGGCGGGCATGGTGCTGCACCCCGCGCCGCATGATGCCGGCACGCGTCCGGCGGT
GGGCATCACCATGTTCGGCGTCACCACACCCTGCGTTACGGAGGCGATGCATATCCTGACAGGGGATTTCGAATGTCTTG
TCTTCCACGCCACCGGAACCGGCGGGCGGTCGATGGAACGGCTTGTGCGCCAGGGCATGATCGGCGGCGTGCTCGACATC
ACCACCACCGAGTTCTGCGATTTCGTCGCGGGCGGCATCTTCCCCTGCGAGGCCGGGCGCCTGGATGCCGTCGCCGCGAC
CGGTGTGCCCTATGTCGGAAGCTGCGGCGGGCTGGACATGGTCAATTTCGGCGCCCGGGAGACGGTGCCGCAGCGGTATC
GCGACCGGGTTTTCGTGCAGCATAATCCGTTCATCACGCTGATGCGCACGACGGCCGAGGAATGCGGACAGATGGGACGC
CTGATCGGCGCGCGCCTCAACCGCTGCCACGGGCCCGTGCGCTTCTATTATCCGGAAAAGGGATTTTCCCAGCTCGATCG
TCCCGGTCAGCCCTTTCACGACCCGGCGGCGAACGCGGCCTTCCGCGACGCGCTGGCGTCCACGCTGGAACAGACCGATC
GGCGGCGTTTCATCAGCCTGCCGCTTGCCCTGAACGACCCGGCCTTCGCCCAGGCCATGGTCACGGAATTCCGCACCCTT
TTCAAGGAGAGTCACCCCCATGCCCCGCATTGA

Upstream 100 bases:

>100_bases
GGCAGCCCCATTTCCTGGCGATGAAGGCGATGTTCGACCAGGGCAAGGCCGGCCCGCTGAGCGTCACCCTGCTGCAGGAC
GTGCCGGCCCTGGCCTGAGA

Downstream 100 bases:

>100_bases
ACGCAGCACCATCCTTGCCCGCCTGCACAGGATGATCGACGACCGCAAGCCGATCATCGGCGGCGGCGCGGGGACCGGCC
TGTCCGCCAAGTGCGAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MGEIMIPSVYLLGTADTKFAELDYLRSVLTGRGVGSHIVDVGTREDPCAADITARQVAACHPDGAAAVFCGERGRAIAAM
SEALRRFLPGRADLAGVIAIGGSGGTALVAPALQDLPIGLPKILVSTVASGNVAPYVGESDLSMVYSVVDLQGLNRISRT
ILANAANAMAGMVLHPAPHDAGTRPAVGITMFGVTTPCVTEAMHILTGDFECLVFHATGTGGRSMERLVRQGMIGGVLDI
TTTEFCDFVAGGIFPCEAGRLDAVAATGVPYVGSCGGLDMVNFGARETVPQRYRDRVFVQHNPFITLMRTTAEECGQMGR
LIGARLNRCHGPVRFYYPEKGFSQLDRPGQPFHDPAANAAFRDALASTLEQTDRRRFISLPLALNDPAFAQAMVTEFRTL
FKESHPHAPH

Sequences:

>Translated_410_residues
MGEIMIPSVYLLGTADTKFAELDYLRSVLTGRGVGSHIVDVGTREDPCAADITARQVAACHPDGAAAVFCGERGRAIAAM
SEALRRFLPGRADLAGVIAIGGSGGTALVAPALQDLPIGLPKILVSTVASGNVAPYVGESDLSMVYSVVDLQGLNRISRT
ILANAANAMAGMVLHPAPHDAGTRPAVGITMFGVTTPCVTEAMHILTGDFECLVFHATGTGGRSMERLVRQGMIGGVLDI
TTTEFCDFVAGGIFPCEAGRLDAVAATGVPYVGSCGGLDMVNFGARETVPQRYRDRVFVQHNPFITLMRTTAEECGQMGR
LIGARLNRCHGPVRFYYPEKGFSQLDRPGQPFHDPAANAAFRDALASTLEQTDRRRFISLPLALNDPAFAQAMVTEFRTL
FKESHPHAPH
>Mature_409_residues
GEIMIPSVYLLGTADTKFAELDYLRSVLTGRGVGSHIVDVGTREDPCAADITARQVAACHPDGAAAVFCGERGRAIAAMS
EALRRFLPGRADLAGVIAIGGSGGTALVAPALQDLPIGLPKILVSTVASGNVAPYVGESDLSMVYSVVDLQGLNRISRTI
LANAANAMAGMVLHPAPHDAGTRPAVGITMFGVTTPCVTEAMHILTGDFECLVFHATGTGGRSMERLVRQGMIGGVLDIT
TTEFCDFVAGGIFPCEAGRLDAVAATGVPYVGSCGGLDMVNFGARETVPQRYRDRVFVQHNPFITLMRTTAEECGQMGRL
IGARLNRCHGPVRFYYPEKGFSQLDRPGQPFHDPAANAAFRDALASTLEQTDRRRFISLPLALNDPAFAQAMVTEFRTLF
KESHPHAPH

Specific function: Unknown

COG id: COG5441

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0261 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008322 [H]

Pfam domain/function: PF06792 UPF0261 [H]

EC number: NA

Molecular weight: Translated: 43572; Mature: 43440

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGEIMIPSVYLLGTADTKFAELDYLRSVLTGRGVGSHIVDVGTREDPCAADITARQVAAC
CCCEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHC
HPDGAAAVFCGERGRAIAAMSEALRRFLPGRADLAGVIAIGGSGGTALVAPALQDLPIGL
CCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCCHHHCCCCH
PKILVSTVASGNVAPYVGESDLSMVYSVVDLQGLNRISRTILANAANAMAGMVLHPAPHD
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCC
AGTRPAVGITMFGVTTPCVTEAMHILTGDFECLVFHATGTGGRSMERLVRQGMIGGVLDI
CCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHCCCCCCEEHH
TTTEFCDFVAGGIFPCEAGRLDAVAATGVPYVGSCGGLDMVNFGARETVPQRYRDRVFVQ
HHHHHHHHHHCCCCCCCCCCCCEEHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEE
HNPFITLMRTTAEECGQMGRLIGARLNRCHGPVRFYYPEKGFSQLDRPGQPFHDPAANAA
CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHCCCCCCCCCCCHHHHH
FRDALASTLEQTDRRRFISLPLALNDPAFAQAMVTEFRTLFKESHPHAPH
HHHHHHHHHHHHHCCEEEECCEEECCHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GEIMIPSVYLLGTADTKFAELDYLRSVLTGRGVGSHIVDVGTREDPCAADITARQVAAC
CCEECCCEEEEECCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHC
HPDGAAAVFCGERGRAIAAMSEALRRFLPGRADLAGVIAIGGSGGTALVAPALQDLPIGL
CCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCEEECCCHHHCCCCH
PKILVSTVASGNVAPYVGESDLSMVYSVVDLQGLNRISRTILANAANAMAGMVLHPAPHD
HHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCCCC
AGTRPAVGITMFGVTTPCVTEAMHILTGDFECLVFHATGTGGRSMERLVRQGMIGGVLDI
CCCCCCCEEEEECCCCHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHCCCCCCEEHH
TTTEFCDFVAGGIFPCEAGRLDAVAATGVPYVGSCGGLDMVNFGARETVPQRYRDRVFVQ
HHHHHHHHHHCCCCCCCCCCCCEEHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEE
HNPFITLMRTTAEECGQMGRLIGARLNRCHGPVRFYYPEKGFSQLDRPGQPFHDPAANAA
CCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHCCCCCCCCCCCHHHHH
FRDALASTLEQTDRRRFISLPLALNDPAFAQAMVTEFRTLFKESHPHAPH
HHHHHHHHHHHHHCCEEEECCEEECCHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA