Click here to switch to the map view.

The map label for this gene is 162146419

Identifier: 162146419

GI number: 162146419

Start: 600519

End: 601541

Strand: Direct

Name: 162146419

Synonym: GDI_0594

Alternate gene names: NA

Gene position: 600519-601541 (Clockwise)

Preceding gene: 162146418

Following gene: 162146427

Centisome position: 15.23

GC content: 67.35

Gene sequence:

>1023_bases
ATGTCCGAGCATACCCCCATTGGTCTCGATAACGGGACCGCACCCATTCGGGCGCTGACCCATTCGGGGAATTTCCACGC
CGACGAGACGCTGGGATATGTCATCCTCCACTACGCGCTTGCGCCGCAGGGGGACCTGCGCGCCCGCGTGCTGGAGGCAC
AGCCCGGCGATCGGCTGATCTTCGCGCGCACGCGCGCGCCCGAGCGCATTCAGGCGTCCGACATCGTGTTCGATGTCGGC
GGCCTGTACGCACCCGCCAAGGGGCGATACGACCATCACATGAAGGACAAGCCGCTGCGCGAGGACGGCACGCCTTACAG
CGCGGCCGGATTGCTGTGGAAGGATTACGGCGTCGCGGCGATTCGCAACATTCTCGAAACGCCCCTGGACGATTCCACCG
TTGCCGCCATCTGGCAGGCCATCGACAAGTCGCTGATCCTGCCGATCGACCAGGACGACAATGGGGTCGCGAAGATGGGA
AAGCTGTCCCTGGCGGATATCGTGTCGGCCTGCGGACCGGCCTGGGATACCGCCGAACTGTACGGGCCGGAGGAAGCCAG
GGCGCGAGAGGCCAGGGGCTTTGCAAACGCCGCGGTCGCCGTGGCGTCGCATCTGGTCAATGTGGTCGATCGTGCGCGGG
CCAGCCTGAAGGCCACGGACCGGGTGCTGACGGCCTATGACACGGCGGAGGACAAGCGCATCCTGGTCATGGAAACCGGA
ATGCCGACCGAAAAGGTGATTTTCGAGCACGATCTTCCGGTCGTCTACGTGGTCTCCCCGACCGGTACCGGCCAGTGGAA
CGTGAAGGCCGTCCCCCCGGTCCGGGGTGATTTCGGGCAGCGGGTGCCGCTGCCCGAAGCGTGGCGCGGCCTGGAGCGGG
AGGCGCTGGCCGGCATCTCCGGCGTTCCCGATGCCGTGTTCGCCCACCCGGCGCGCTTCATCTGTGGTGCGGGAAGCCGG
GACGGCGCGATCAGGATGGCGCGCCTGGCGCTGGAGATCGGCGCCGCCCCGCCTCCCGCGTGA

Upstream 100 bases:

>100_bases
CTGCCCGTTTTGCTGTGGCGAAGCCTATTGTCCGGCCGCCGCCCGTGCGGCATGACGGGGCCGACCAGAAATCAACCCAT
GTTTGTCAGCAGGCCCGATG

Downstream 100 bases:

>100_bases
CCGGATCGTCCGGTTACGCCCCAAACGTGTTTTCGAAAATAATCTCGTCGGCCGGCAGGATGCCGCCCGTGGGATAGGGC
TCGGACGCGGGCTTTCCCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MSEHTPIGLDNGTAPIRALTHSGNFHADETLGYVILHYALAPQGDLRARVLEAQPGDRLIFARTRAPERIQASDIVFDVG
GLYAPAKGRYDHHMKDKPLREDGTPYSAAGLLWKDYGVAAIRNILETPLDDSTVAAIWQAIDKSLILPIDQDDNGVAKMG
KLSLADIVSACGPAWDTAELYGPEEARAREARGFANAAVAVASHLVNVVDRARASLKATDRVLTAYDTAEDKRILVMETG
MPTEKVIFEHDLPVVYVVSPTGTGQWNVKAVPPVRGDFGQRVPLPEAWRGLEREALAGISGVPDAVFAHPARFICGAGSR
DGAIRMARLALEIGAAPPPA

Sequences:

>Translated_340_residues
MSEHTPIGLDNGTAPIRALTHSGNFHADETLGYVILHYALAPQGDLRARVLEAQPGDRLIFARTRAPERIQASDIVFDVG
GLYAPAKGRYDHHMKDKPLREDGTPYSAAGLLWKDYGVAAIRNILETPLDDSTVAAIWQAIDKSLILPIDQDDNGVAKMG
KLSLADIVSACGPAWDTAELYGPEEARAREARGFANAAVAVASHLVNVVDRARASLKATDRVLTAYDTAEDKRILVMETG
MPTEKVIFEHDLPVVYVVSPTGTGQWNVKAVPPVRGDFGQRVPLPEAWRGLEREALAGISGVPDAVFAHPARFICGAGSR
DGAIRMARLALEIGAAPPPA
>Mature_339_residues
SEHTPIGLDNGTAPIRALTHSGNFHADETLGYVILHYALAPQGDLRARVLEAQPGDRLIFARTRAPERIQASDIVFDVGG
LYAPAKGRYDHHMKDKPLREDGTPYSAAGLLWKDYGVAAIRNILETPLDDSTVAAIWQAIDKSLILPIDQDDNGVAKMGK
LSLADIVSACGPAWDTAELYGPEEARAREARGFANAAVAVASHLVNVVDRARASLKATDRVLTAYDTAEDKRILVMETGM
PTEKVIFEHDLPVVYVVSPTGTGQWNVKAVPPVRGDFGQRVPLPEAWRGLEREALAGISGVPDAVFAHPARFICGAGSRD
GAIRMARLALEIGAAPPPA

Specific function: Unknown

COG id: COG4286

COG function: function code S; Uncharacterized conserved protein related to MYG1 family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0160 (MYG1) family [H]

Homologues:

Organism=Homo sapiens, GI145275185, Length=346, Percent_Identity=28.6127167630058, Blast_Score=130, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI25150283, Length=345, Percent_Identity=29.8550724637681, Blast_Score=132, Evalue=2e-31,
Organism=Saccharomyces cerevisiae, GI6321004, Length=351, Percent_Identity=29.0598290598291, Blast_Score=124, Evalue=2e-29,
Organism=Drosophila melanogaster, GI45551849, Length=355, Percent_Identity=27.887323943662, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24645226, Length=355, Percent_Identity=27.887323943662, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24645224, Length=355, Percent_Identity=27.887323943662, Blast_Score=94, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003226 [H]

Pfam domain/function: PF03690 UPF0160 [H]

EC number: NA

Molecular weight: Translated: 36519; Mature: 36388

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEHTPIGLDNGTAPIRALTHSGNFHADETLGYVILHYALAPQGDLRARVLEAQPGDRLI
CCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEE
FARTRAPERIQASDIVFDVGGLYAPAKGRYDHHMKDKPLREDGTPYSAAGLLWKDYGVAA
EEECCCCCCEEHHHEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCHHHCHHHHHCCHHH
IRNILETPLDDSTVAAIWQAIDKSLILPIDQDDNGVAKMGKLSLADIVSACGPAWDTAEL
HHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHCCHHHHHHHHHCCCCCCCHHH
YGPEEARAREARGFANAAVAVASHLVNVVDRARASLKATDRVLTAYDTAEDKRILVMETG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEECC
MPTEKVIFEHDLPVVYVVSPTGTGQWNVKAVPPVRGDFGQRVPLPEAWRGLEREALAGIS
CCHHHEEEECCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCHHHHHHCCC
GVPDAVFAHPARFICGAGSRDGAIRMARLALEIGAAPPPA
CCCHHHHHCCHHHEECCCCCCCHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SEHTPIGLDNGTAPIRALTHSGNFHADETLGYVILHYALAPQGDLRARVLEAQPGDRLI
CCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCEEE
FARTRAPERIQASDIVFDVGGLYAPAKGRYDHHMKDKPLREDGTPYSAAGLLWKDYGVAA
EEECCCCCCEEHHHEEEECCCEECCCCCCCCCCCCCCCCCCCCCCCHHHCHHHHHCCHHH
IRNILETPLDDSTVAAIWQAIDKSLILPIDQDDNGVAKMGKLSLADIVSACGPAWDTAEL
HHHHHHCCCCCHHHHHHHHHHCCCEEEEECCCCCCHHHHCCHHHHHHHHHCCCCCCCHHH
YGPEEARAREARGFANAAVAVASHLVNVVDRARASLKATDRVLTAYDTAEDKRILVMETG
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEEEECC
MPTEKVIFEHDLPVVYVVSPTGTGQWNVKAVPPVRGDFGQRVPLPEAWRGLEREALAGIS
CCHHHEEEECCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCHHHHHHCCC
GVPDAVFAHPARFICGAGSRDGAIRMARLALEIGAAPPPA
CCCHHHHHCCHHHEECCCCCCCHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]