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The map label for this gene is acoR [H]

Identifier: 162146366

GI number: 162146366

Start: 536361

End: 537311

Strand: Direct

Name: acoR [H]

Synonym: GDI_0541

Alternate gene names: 162146366

Gene position: 536361-537311 (Clockwise)

Preceding gene: 162146365

Following gene: 162146367

Centisome position: 13.6

GC content: 66.67

Gene sequence:

>951_bases
ATGAGGTCGGCTTGCGGCAAGGATTCCGGTGCCCATCTGTCGTGCCGTCCCCCCGCGGGGGCCGGCACCGGCGAGGTCGC
GAAATCCTGGCAACGGTGCGCGGGATCGTATCAGCTTGACCCGGCCCAGGGATGGCGGGCGGAAATCCTCTCCGGCGCGG
AGTTCCGCCATATCAGCGGCCGTTCCGCGACCCTGCTGAAGATGGCGGTCCCCGAGATGCGCCGGCTGTTCACCCTGGTG
CAGGGGCTGAACCTGATGGTGCTCCTGGCCGATTCCGATGCCACGATCCTGGCGCGCAGCGTCGATGAAACGCACCTGCT
CACCTGCCGGCGGCTGCAGTTGCGCGAGGGCGCGATGTGGGACGAGCGCGTGGCGGGAACCAACGGCATCGGCACGTCCG
TCCGGGACGGCTGCCCCATCTTCCTGGGCGAGGGCGAGCACTGGCGTTTCTGCTTCTCGCTCCTGGCCAGCTATGCCGCG
CCGATTTTCGATTCACAGGGGCGCGTCGCGGGGGCGATCAACCTCGCGGCCCTCAGCGGAGATTCGACACGCCCCGTGGC
GTCCCTGGTGCTGGAAACGCTGCTGCAATCGGCACGCCGGATCGAGGAACGGCTGTTCCGGGAACGCTATGTGGGCCAGC
GGGTGCTGACCCTCGGTCCTGACGAAGGGTGTTCGGCGCCGCTGGTCTCCATCAATGATGACGGGCAGATCACCGGTGCG
ACCCATGCCGCGCGCAGTCTTGCGGGCTGGACCGACGACATGATCCAGAAACATCCCAACCTTCTGACCAAGCTGGAATC
CAGCAGCGAGATCAGCTTCCAGAAGGCCGAGGAGCATGTCCTCCGCTCCGCCCTGGCAATGTCGCTGGGCAATGCCAGCG
CGGCGGCGCGCAGCCTGGGAATCAGCCGCGCCACGCTGTATCGCAAATTGAAATCCCTCGGCCTGACATAG

Upstream 100 bases:

>100_bases
GCGGCAGGATTGATGCTGTATGGGTGACAGGCCTCTCCGGGCCGGCAGGGGGGCGGGGAAGCGGAACGCCGGTGAAACGA
CGCGCGAACGGTGATGGGAC

Downstream 100 bases:

>100_bases
GGGCCGCCCCGTTGAACCGGGCACCGTCCGGACCATATGCATTGCCATGTATGCAGGACCTTTCCTCGGAGATATCCTTC
CGCCCGTGACCGACGAGGTC

Product: Fis family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MRSACGKDSGAHLSCRPPAGAGTGEVAKSWQRCAGSYQLDPAQGWRAEILSGAEFRHISGRSATLLKMAVPEMRRLFTLV
QGLNLMVLLADSDATILARSVDETHLLTCRRLQLREGAMWDERVAGTNGIGTSVRDGCPIFLGEGEHWRFCFSLLASYAA
PIFDSQGRVAGAINLAALSGDSTRPVASLVLETLLQSARRIEERLFRERYVGQRVLTLGPDEGCSAPLVSINDDGQITGA
THAARSLAGWTDDMIQKHPNLLTKLESSSEISFQKAEEHVLRSALAMSLGNASAAARSLGISRATLYRKLKSLGLT

Sequences:

>Translated_316_residues
MRSACGKDSGAHLSCRPPAGAGTGEVAKSWQRCAGSYQLDPAQGWRAEILSGAEFRHISGRSATLLKMAVPEMRRLFTLV
QGLNLMVLLADSDATILARSVDETHLLTCRRLQLREGAMWDERVAGTNGIGTSVRDGCPIFLGEGEHWRFCFSLLASYAA
PIFDSQGRVAGAINLAALSGDSTRPVASLVLETLLQSARRIEERLFRERYVGQRVLTLGPDEGCSAPLVSINDDGQITGA
THAARSLAGWTDDMIQKHPNLLTKLESSSEISFQKAEEHVLRSALAMSLGNASAAARSLGISRATLYRKLKSLGLT
>Mature_316_residues
MRSACGKDSGAHLSCRPPAGAGTGEVAKSWQRCAGSYQLDPAQGWRAEILSGAEFRHISGRSATLLKMAVPEMRRLFTLV
QGLNLMVLLADSDATILARSVDETHLLTCRRLQLREGAMWDERVAGTNGIGTSVRDGCPIFLGEGEHWRFCFSLLASYAA
PIFDSQGRVAGAINLAALSGDSTRPVASLVLETLLQSARRIEERLFRERYVGQRVLTLGPDEGCSAPLVSINDDGQITGA
THAARSLAGWTDDMIQKHPNLLTKLESSSEISFQKAEEHVLRSALAMSLGNASAAARSLGISRATLYRKLKSLGLT

Specific function: Acts as a transcriptional activator of the acoABCL operon encoding the acetoin dehydrogenase complex [H]

COG id: COG3284

COG function: function code QK; Transcriptional activator of acetoin/glycerol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 sigma-54 factor interaction domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR020441
- InterPro:   IPR009057
- InterPro:   IPR002197
- InterPro:   IPR002078 [H]

Pfam domain/function: PF02954 HTH_8; PF00158 Sigma54_activat [H]

EC number: NA

Molecular weight: Translated: 34051; Mature: 34051

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSACGKDSGAHLSCRPPAGAGTGEVAKSWQRCAGSYQLDPAQGWRAEILSGAEFRHISG
CCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEECCC
RSATLLKMAVPEMRRLFTLVQGLNLMVLLADSDATILARSVDETHLLTCRRLQLREGAMW
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCC
DERVAGTNGIGTSVRDGCPIFLGEGEHWRFCFSLLASYAAPIFDSQGRVAGAINLAALSG
HHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECC
DSTRPVASLVLETLLQSARRIEERLFRERYVGQRVLTLGPDEGCSAPLVSINDDGQITGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEECCCCCCCCH
THAARSLAGWTDDMIQKHPNLLTKLESSSEISFQKAEEHVLRSALAMSLGNASAAARSLG
HHHHHHHHCCCHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
ISRATLYRKLKSLGLT
CHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRSACGKDSGAHLSCRPPAGAGTGEVAKSWQRCAGSYQLDPAQGWRAEILSGAEFRHISG
CCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCEEECCC
RSATLLKMAVPEMRRLFTLVQGLNLMVLLADSDATILARSVDETHLLTCRRLQLREGAMW
CCHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEECCCHHHHHHHHHHHHHCCCCC
DERVAGTNGIGTSVRDGCPIFLGEGEHWRFCFSLLASYAAPIFDSQGRVAGAINLAALSG
HHHHCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECC
DSTRPVASLVLETLLQSARRIEERLFRERYVGQRVLTLGPDEGCSAPLVSINDDGQITGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEECCCCCCCCH
THAARSLAGWTDDMIQKHPNLLTKLESSSEISFQKAEEHVLRSALAMSLGNASAAARSLG
HHHHHHHHCCCHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHC
ISRATLYRKLKSLGLT
CHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969503; 9384377; 10368162 [H]