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The map label for this gene is rfaB [C]

Identifier: 162146320

GI number: 162146320

Start: 491851

End: 493083

Strand: Reverse

Name: rfaB [C]

Synonym: GDI_0495

Alternate gene names: 162146320

Gene position: 493083-491851 (Counterclockwise)

Preceding gene: 162146321

Following gene: 162146318

Centisome position: 12.5

GC content: 68.13

Gene sequence:

>1233_bases
GTGACTGACGCCGAAGCCCCGGACCGTCGATCAGACGGTCCAGGCAAGGTGAAGGCGTTACGGTGCTGCTTCCTGATCGA
GCATATTGGCGCGCTGGGCGGGACGGAGCGCGCCGCCTGTCAGGTCATGACGGGACTGGCCGAACGGGGCGGCTTCGAGG
CCATCCATCTACTGGAAGTCTTTCCCGTCGGGCCGGCGCCGTTCCCGTTTGATCCCTCGATTCGACGCGCGGCGCTGAGC
GCGCGCAAGATCTCGGTCCTCGGCGCATGGCCGCGTCTCGTGCACCGGTTGCGCGCCTATGTCCGCATGCATGCGATCGA
CGTGCTGATCGTCGTGGAATCCACCCATGCGCTCTATGCGATCCCTGCCCTGGCGGGCACTGGCGTACGGTGCGTGGTGT
GGGAGCATTTCAATTTCGGCGTCGATCTCGGACGACGCCCACGGCGCTGGGGACGCCGCGTCGCGGGGCGCTGGGCGGAT
GACGTGGTGACGCTGACCCAACGCGACATAACCATGTGGCGTATGGGAATCGGGACGGGGATGCGCGCGCATCTCACCGC
GATTTCCAATGCGGCGCCGCCTGTGTGGCGCACGGCCTATCCGGTCGAATCGCGCGTGGTCCTCGCGGTCGGCCGTCTTG
TGCCGCAAAAGGGATACGACCGGCTGATCGAGGCATGGCGGCTTCTCGCGCGCGATCCCGCGCTGGCGGCCTGGCGGCTG
GCCATCGTCGGCGACGGGCCGCTGCGCGGGGTCCTCGAACGCCAGATCGCGGACGCGGAATTGGGAGAGCGCATCGAACT
GGCCCCCGCCACCGTGGCGATCGAGACGTATTATGCCAGGGCCGCCCTCTATTGCTGCGCATCGCGGTTCGAAGGATTTC
CCATGGTGCTGCTGGAAGCCGCGGCCGCCGGCGTCCCCGCTGTCGCTTTCAACTGCGAGACCGGGCCGTCCGAGATCATC
ATCGACGGTGAAAGCGGGGTGCTCGTGCCGCAGGGCGATGTCGCCGGACTGGCCGGAGCATTGCGCGCACTGATGACGGA
CCCCGTTCGGCGCGCACGTCTCTCGGTCGGCGCGCGGAAGCGGGCGGAGGTGTTCGCTCTGCCAATCGTTCTGGCGCGAT
GGTACGCGCTGCTGGGCGTCGACGCGCCCGCGACGCGAAGCGACGTGGAATGGAGCGTCGGTCAGGACAGGACGCCGCGC
GTGCGCTCCGTGATCATGTCGGCCAGCGTGTAG

Upstream 100 bases:

>100_bases
CAGAATTACACGAGCCGTTCGACGCATTGGGGGGCGGTTTCCGGACGGCCCGGAGACGCCGCCCCGGCACCGTCGGTCTT
GCCCAGAGCCGGATCGGGGA

Downstream 100 bases:

>100_bases
CGGTCCAGCACCGCGGTGAAGGCGCCCAGGGCCTCGCCCAGCACGCCCTTCAGGCGGCAGGCATCGGCCAGGACGCAGGG
GCGTGCATCGGGGGCCGACG

Product: glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MTDAEAPDRRSDGPGKVKALRCCFLIEHIGALGGTERAACQVMTGLAERGGFEAIHLLEVFPVGPAPFPFDPSIRRAALS
ARKISVLGAWPRLVHRLRAYVRMHAIDVLIVVESTHALYAIPALAGTGVRCVVWEHFNFGVDLGRRPRRWGRRVAGRWAD
DVVTLTQRDITMWRMGIGTGMRAHLTAISNAAPPVWRTAYPVESRVVLAVGRLVPQKGYDRLIEAWRLLARDPALAAWRL
AIVGDGPLRGVLERQIADAELGERIELAPATVAIETYYARAALYCCASRFEGFPMVLLEAAAAGVPAVAFNCETGPSEII
IDGESGVLVPQGDVAGLAGALRALMTDPVRRARLSVGARKRAEVFALPIVLARWYALLGVDAPATRSDVEWSVGQDRTPR
VRSVIMSASV

Sequences:

>Translated_410_residues
MTDAEAPDRRSDGPGKVKALRCCFLIEHIGALGGTERAACQVMTGLAERGGFEAIHLLEVFPVGPAPFPFDPSIRRAALS
ARKISVLGAWPRLVHRLRAYVRMHAIDVLIVVESTHALYAIPALAGTGVRCVVWEHFNFGVDLGRRPRRWGRRVAGRWAD
DVVTLTQRDITMWRMGIGTGMRAHLTAISNAAPPVWRTAYPVESRVVLAVGRLVPQKGYDRLIEAWRLLARDPALAAWRL
AIVGDGPLRGVLERQIADAELGERIELAPATVAIETYYARAALYCCASRFEGFPMVLLEAAAAGVPAVAFNCETGPSEII
IDGESGVLVPQGDVAGLAGALRALMTDPVRRARLSVGARKRAEVFALPIVLARWYALLGVDAPATRSDVEWSVGQDRTPR
VRSVIMSASV
>Mature_409_residues
TDAEAPDRRSDGPGKVKALRCCFLIEHIGALGGTERAACQVMTGLAERGGFEAIHLLEVFPVGPAPFPFDPSIRRAALSA
RKISVLGAWPRLVHRLRAYVRMHAIDVLIVVESTHALYAIPALAGTGVRCVVWEHFNFGVDLGRRPRRWGRRVAGRWADD
VVTLTQRDITMWRMGIGTGMRAHLTAISNAAPPVWRTAYPVESRVVLAVGRLVPQKGYDRLIEAWRLLARDPALAAWRLA
IVGDGPLRGVLERQIADAELGERIELAPATVAIETYYARAALYCCASRFEGFPMVLLEAAAAGVPAVAFNCETGPSEIII
DGESGVLVPQGDVAGLAGALRALMTDPVRRARLSVGARKRAEVFALPIVLARWYALLGVDAPATRSDVEWSVGQDRTPRV
RSVIMSASV

Specific function: Adds A Galactose Goup To A Glucose Group Of Lps. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: 2.4.1.- [C]

Molecular weight: Translated: 44514; Mature: 44383

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDAEAPDRRSDGPGKVKALRCCFLIEHIGALGGTERAACQVMTGLAERGGFEAIHLLEV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEE
FPVGPAPFPFDPSIRRAALSARKISVLGAWPRLVHRLRAYVRMHAIDVLIVVESTHALYA
EECCCCCCCCCHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEE
IPALAGTGVRCVVWEHFNFGVDLGRRPRRWGRRVAGRWADDVVTLTQRDITMWRMGIGTG
EHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHEEHHHCCCEEEEECCCCC
MRAHLTAISNAAPPVWRTAYPVESRVVLAVGRLVPQKGYDRLIEAWRLLARDPALAAWRL
CHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEE
AIVGDGPLRGVLERQIADAELGERIELAPATVAIETYYARAALYCCASRFEGFPMVLLEA
EEECCCHHHHHHHHHHHHHHHCCEEEECCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHH
AAAGVPAVAFNCETGPSEIIIDGESGVLVPQGDVAGLAGALRALMTDPVRRARLSVGARK
HHCCCCEEEEECCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHCHHHHHHHHCCCCC
RAEVFALPIVLARWYALLGVDAPATRSDVEWSVGQDRTPRVRSVIMSASV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure 
TDAEAPDRRSDGPGKVKALRCCFLIEHIGALGGTERAACQVMTGLAERGGFEAIHLLEV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEE
FPVGPAPFPFDPSIRRAALSARKISVLGAWPRLVHRLRAYVRMHAIDVLIVVESTHALYA
EECCCCCCCCCHHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHEEEEEEEECCCCEEE
IPALAGTGVRCVVWEHFNFGVDLGRRPRRWGRRVAGRWADDVVTLTQRDITMWRMGIGTG
EHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHCCCHHHHEEHHHCCCEEEEECCCCC
MRAHLTAISNAAPPVWRTAYPVESRVVLAVGRLVPQKGYDRLIEAWRLLARDPALAAWRL
CHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEEE
AIVGDGPLRGVLERQIADAELGERIELAPATVAIETYYARAALYCCASRFEGFPMVLLEA
EEECCCHHHHHHHHHHHHHHHCCEEEECCCEEEHHHHHHHHHHHHHHHHCCCCHHHHHHH
AAAGVPAVAFNCETGPSEIIIDGESGVLVPQGDVAGLAGALRALMTDPVRRARLSVGARK
HHCCCCEEEEECCCCCCEEEEECCCCEEEECCCHHHHHHHHHHHHHCHHHHHHHHCCCCC
RAEVFALPIVLARWYALLGVDAPATRSDVEWSVGQDRTPRVRSVIMSASV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Glycosyltransferases; Hexosyltransferases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]