| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is gsiD [H]
Identifier: 162146290
GI number: 162146290
Start: 463501
End: 464373
Strand: Direct
Name: gsiD [H]
Synonym: GDI_0465
Alternate gene names: 162146290
Gene position: 463501-464373 (Clockwise)
Preceding gene: 162146289
Following gene: 162146291
Centisome position: 11.75
GC content: 69.3
Gene sequence:
>873_bases TTGACCGAGCCGGTTCTGAATGACGAGGCGGGCATGGTCGCCGCGACGATCGCGGGCCCGGCGCGGCCATGGCGCCGGGC GGTGACCGGGCGGCAGGGGGTCGCGCTGGGGGCGTGCGTTCTTTTCGGGATCGTCCTGCTGCTGCCGTATCTTGCGCCCT TCGATGGCGGGGCGGTGGTCAGCGACGCGGTCTTCGCGCCGCCCAGCCGGCATTTTCTTCTCGGCACCGATTATCTGGGC CGCGACGTCTTCAGCCGCATCCTGGTGGGCGTGCGCGACACGGTCTTCATCGCGCTGGCCGCGACCCTGCTGGCCTGCGC GGTGGGCGCCACGCTGGGCATCGGGTCGGCCCTGGTCGGCGGATGGGCGGAAATCCTGCTCAGCCGCCTGTGCGATGCGC TGATTTCCATTCCCAGCGTCCTGTTCGGGCTGATCCTCGTCGCGGCGTTCGGTTCGTCCTGGCCGGTGCTGATCGGCGCG ATGGCGGTGATCTACATGCCCGGATGCTATCGCGTGTCCTATGCGCTGGCGCTTCAGCTCCACCAGCTCGATTTCGTGCT GGTGGCGCGGGGCCGGGGCGAGGGCCTGCCTTACCTGATCCGCCACGAAATCCTGCCGAACATGATCGGGCCGGTGCTGA CGGACATGGGCCTGCGCTTCGTCTATGTCGTGCTGCTGCTGAGCAATCTCAGCTTCCTCGGGCTGGGGGTGCAGCCGCCC GACGCGGACCTCGGCTCGCTGGTGCGCGAGAACATTCTCGGCATCGTCTTCGCGGCGCCCGCCGTCCTGGCGCCCGCCTT GGCGATCGCGGTGCTGACCGTCGGCGTCAACCTGTCGATCGACCGGATGTCCGCCAAGGGGGGCCGCCGGTGA
Upstream 100 bases:
>100_bases TCATCCAGGCCTGCGCCCTGATTTTCTGCGGGACCTACCTGGTGCTGATCACGCTGGCCGATGTCGCATCCATACTCGGC AACCCGCGCAGGAGGCGTTC
Downstream 100 bases:
>100_bases AGTCGCTTGCCGAACTGCCCATCATCTCCCTCTCCGGCCTGAAGATCACCGGCCGGCGTCCCGGCGAGCCCGAGACGGTG ATCGTCGACGGCATCGACCT
Product: ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MTEPVLNDEAGMVAATIAGPARPWRRAVTGRQGVALGACVLFGIVLLLPYLAPFDGGAVVSDAVFAPPSRHFLLGTDYLG RDVFSRILVGVRDTVFIALAATLLACAVGATLGIGSALVGGWAEILLSRLCDALISIPSVLFGLILVAAFGSSWPVLIGA MAVIYMPGCYRVSYALALQLHQLDFVLVARGRGEGLPYLIRHEILPNMIGPVLTDMGLRFVYVVLLLSNLSFLGLGVQPP DADLGSLVRENILGIVFAAPAVLAPALAIAVLTVGVNLSIDRMSAKGGRR
Sequences:
>Translated_290_residues MTEPVLNDEAGMVAATIAGPARPWRRAVTGRQGVALGACVLFGIVLLLPYLAPFDGGAVVSDAVFAPPSRHFLLGTDYLG RDVFSRILVGVRDTVFIALAATLLACAVGATLGIGSALVGGWAEILLSRLCDALISIPSVLFGLILVAAFGSSWPVLIGA MAVIYMPGCYRVSYALALQLHQLDFVLVARGRGEGLPYLIRHEILPNMIGPVLTDMGLRFVYVVLLLSNLSFLGLGVQPP DADLGSLVRENILGIVFAAPAVLAPALAIAVLTVGVNLSIDRMSAKGGRR >Mature_289_residues TEPVLNDEAGMVAATIAGPARPWRRAVTGRQGVALGACVLFGIVLLLPYLAPFDGGAVVSDAVFAPPSRHFLLGTDYLGR DVFSRILVGVRDTVFIALAATLLACAVGATLGIGSALVGGWAEILLSRLCDALISIPSVLFGLILVAAFGSSWPVLIGAM AVIYMPGCYRVSYALALQLHQLDFVLVARGRGEGLPYLIRHEILPNMIGPVLTDMGLRFVYVVLLLSNLSFLGLGVQPPD ADLGSLVRENILGIVFAAPAVLAPALAIAVLTVGVNLSIDRMSAKGGRR
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1173
COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787054, Length=262, Percent_Identity=33.206106870229, Blast_Score=120, Evalue=8e-29, Organism=Escherichia coli, GI1787760, Length=235, Percent_Identity=32.3404255319149, Blast_Score=115, Evalue=3e-27, Organism=Escherichia coli, GI1787549, Length=218, Percent_Identity=31.1926605504587, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI1789964, Length=244, Percent_Identity=30.7377049180328, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1789889, Length=234, Percent_Identity=27.3504273504274, Blast_Score=84, Evalue=9e-18, Organism=Escherichia coli, GI1788505, Length=274, Percent_Identity=27.007299270073, Blast_Score=65, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 30356; Mature: 30224
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPVLNDEAGMVAATIAGPARPWRRAVTGRQGVALGACVLFGIVLLLPYLAPFDGGAVV CCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH SDAVFAPPSRHFLLGTDYLGRDVFSRILVGVRDTVFIALAATLLACAVGATLGIGSALVG HCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWAEILLSRLCDALISIPSVLFGLILVAAFGSSWPVLIGAMAVIYMPGCYRVSYALALQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH HQLDFVLVARGRGEGLPYLIRHEILPNMIGPVLTDMGLRFVYVVLLLSNLSFLGLGVQPP HHHCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCC DADLGSLVRENILGIVFAAPAVLAPALAIAVLTVGVNLSIDRMSAKGGRR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCCCC >Mature Secondary Structure TEPVLNDEAGMVAATIAGPARPWRRAVTGRQGVALGACVLFGIVLLLPYLAPFDGGAVV CCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH SDAVFAPPSRHFLLGTDYLGRDVFSRILVGVRDTVFIALAATLLACAVGATLGIGSALVG HCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWAEILLSRLCDALISIPSVLFGLILVAAFGSSWPVLIGAMAVIYMPGCYRVSYALALQL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH HQLDFVLVARGRGEGLPYLIRHEILPNMIGPVLTDMGLRFVYVVLLLSNLSFLGLGVQPP HHHCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCC DADLGSLVRENILGIVFAAPAVLAPALAIAVLTVGVNLSIDRMSAKGGRR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA