Definition Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession NC_010125
Length 3,944,163

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The map label for this gene is gsiD [H]

Identifier: 162146290

GI number: 162146290

Start: 463501

End: 464373

Strand: Direct

Name: gsiD [H]

Synonym: GDI_0465

Alternate gene names: 162146290

Gene position: 463501-464373 (Clockwise)

Preceding gene: 162146289

Following gene: 162146291

Centisome position: 11.75

GC content: 69.3

Gene sequence:

>873_bases
TTGACCGAGCCGGTTCTGAATGACGAGGCGGGCATGGTCGCCGCGACGATCGCGGGCCCGGCGCGGCCATGGCGCCGGGC
GGTGACCGGGCGGCAGGGGGTCGCGCTGGGGGCGTGCGTTCTTTTCGGGATCGTCCTGCTGCTGCCGTATCTTGCGCCCT
TCGATGGCGGGGCGGTGGTCAGCGACGCGGTCTTCGCGCCGCCCAGCCGGCATTTTCTTCTCGGCACCGATTATCTGGGC
CGCGACGTCTTCAGCCGCATCCTGGTGGGCGTGCGCGACACGGTCTTCATCGCGCTGGCCGCGACCCTGCTGGCCTGCGC
GGTGGGCGCCACGCTGGGCATCGGGTCGGCCCTGGTCGGCGGATGGGCGGAAATCCTGCTCAGCCGCCTGTGCGATGCGC
TGATTTCCATTCCCAGCGTCCTGTTCGGGCTGATCCTCGTCGCGGCGTTCGGTTCGTCCTGGCCGGTGCTGATCGGCGCG
ATGGCGGTGATCTACATGCCCGGATGCTATCGCGTGTCCTATGCGCTGGCGCTTCAGCTCCACCAGCTCGATTTCGTGCT
GGTGGCGCGGGGCCGGGGCGAGGGCCTGCCTTACCTGATCCGCCACGAAATCCTGCCGAACATGATCGGGCCGGTGCTGA
CGGACATGGGCCTGCGCTTCGTCTATGTCGTGCTGCTGCTGAGCAATCTCAGCTTCCTCGGGCTGGGGGTGCAGCCGCCC
GACGCGGACCTCGGCTCGCTGGTGCGCGAGAACATTCTCGGCATCGTCTTCGCGGCGCCCGCCGTCCTGGCGCCCGCCTT
GGCGATCGCGGTGCTGACCGTCGGCGTCAACCTGTCGATCGACCGGATGTCCGCCAAGGGGGGCCGCCGGTGA

Upstream 100 bases:

>100_bases
TCATCCAGGCCTGCGCCCTGATTTTCTGCGGGACCTACCTGGTGCTGATCACGCTGGCCGATGTCGCATCCATACTCGGC
AACCCGCGCAGGAGGCGTTC

Downstream 100 bases:

>100_bases
AGTCGCTTGCCGAACTGCCCATCATCTCCCTCTCCGGCCTGAAGATCACCGGCCGGCGTCCCGGCGAGCCCGAGACGGTG
ATCGTCGACGGCATCGACCT

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MTEPVLNDEAGMVAATIAGPARPWRRAVTGRQGVALGACVLFGIVLLLPYLAPFDGGAVVSDAVFAPPSRHFLLGTDYLG
RDVFSRILVGVRDTVFIALAATLLACAVGATLGIGSALVGGWAEILLSRLCDALISIPSVLFGLILVAAFGSSWPVLIGA
MAVIYMPGCYRVSYALALQLHQLDFVLVARGRGEGLPYLIRHEILPNMIGPVLTDMGLRFVYVVLLLSNLSFLGLGVQPP
DADLGSLVRENILGIVFAAPAVLAPALAIAVLTVGVNLSIDRMSAKGGRR

Sequences:

>Translated_290_residues
MTEPVLNDEAGMVAATIAGPARPWRRAVTGRQGVALGACVLFGIVLLLPYLAPFDGGAVVSDAVFAPPSRHFLLGTDYLG
RDVFSRILVGVRDTVFIALAATLLACAVGATLGIGSALVGGWAEILLSRLCDALISIPSVLFGLILVAAFGSSWPVLIGA
MAVIYMPGCYRVSYALALQLHQLDFVLVARGRGEGLPYLIRHEILPNMIGPVLTDMGLRFVYVVLLLSNLSFLGLGVQPP
DADLGSLVRENILGIVFAAPAVLAPALAIAVLTVGVNLSIDRMSAKGGRR
>Mature_289_residues
TEPVLNDEAGMVAATIAGPARPWRRAVTGRQGVALGACVLFGIVLLLPYLAPFDGGAVVSDAVFAPPSRHFLLGTDYLGR
DVFSRILVGVRDTVFIALAATLLACAVGATLGIGSALVGGWAEILLSRLCDALISIPSVLFGLILVAAFGSSWPVLIGAM
AVIYMPGCYRVSYALALQLHQLDFVLVARGRGEGLPYLIRHEILPNMIGPVLTDMGLRFVYVVLLLSNLSFLGLGVQPPD
ADLGSLVRENILGIVFAAPAVLAPALAIAVLTVGVNLSIDRMSAKGGRR

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=262, Percent_Identity=33.206106870229, Blast_Score=120, Evalue=8e-29,
Organism=Escherichia coli, GI1787760, Length=235, Percent_Identity=32.3404255319149, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1787549, Length=218, Percent_Identity=31.1926605504587, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1789964, Length=244, Percent_Identity=30.7377049180328, Blast_Score=86, Evalue=3e-18,
Organism=Escherichia coli, GI1789889, Length=234, Percent_Identity=27.3504273504274, Blast_Score=84, Evalue=9e-18,
Organism=Escherichia coli, GI1788505, Length=274, Percent_Identity=27.007299270073, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30356; Mature: 30224

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEPVLNDEAGMVAATIAGPARPWRRAVTGRQGVALGACVLFGIVLLLPYLAPFDGGAVV
CCCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
SDAVFAPPSRHFLLGTDYLGRDVFSRILVGVRDTVFIALAATLLACAVGATLGIGSALVG
HCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWAEILLSRLCDALISIPSVLFGLILVAAFGSSWPVLIGAMAVIYMPGCYRVSYALALQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
HQLDFVLVARGRGEGLPYLIRHEILPNMIGPVLTDMGLRFVYVVLLLSNLSFLGLGVQPP
HHHCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCC
DADLGSLVRENILGIVFAAPAVLAPALAIAVLTVGVNLSIDRMSAKGGRR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCCCC
>Mature Secondary Structure 
TEPVLNDEAGMVAATIAGPARPWRRAVTGRQGVALGACVLFGIVLLLPYLAPFDGGAVV
CCCCCCCCCCEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHH
SDAVFAPPSRHFLLGTDYLGRDVFSRILVGVRDTVFIALAATLLACAVGATLGIGSALVG
HCCCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GWAEILLSRLCDALISIPSVLFGLILVAAFGSSWPVLIGAMAVIYMPGCYRVSYALALQL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHH
HQLDFVLVARGRGEGLPYLIRHEILPNMIGPVLTDMGLRFVYVVLLLSNLSFLGLGVQPP
HHHCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCCCC
DADLGSLVRENILGIVFAAPAVLAPALAIAVLTVGVNLSIDRMSAKGGRR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA