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The map label for this gene is fixX [H]

Identifier: 162146279

GI number: 162146279

Start: 450285

End: 450569

Strand: Direct

Name: fixX [H]

Synonym: GDI_0454

Alternate gene names: 162146279

Gene position: 450285-450569 (Clockwise)

Preceding gene: 162146278

Following gene: 162146280

Centisome position: 11.42

GC content: 59.65

Gene sequence:

>285_bases
ATGAGCGATCGGGTCGAAGACCGTCTGTTCCAGAACAGGTATGTCGTGGATGTCGGGCGGCCGCATATTACCGTCCGTCC
GCATGAAACCCCGTCGCAGGCGCTCCTGGTCATGACGCGCATCTGTCCCGCCGGCTGTTACAGCCAGAATGAACAGGGAC
AGGTGGAAGTCGCCGCCGACGGGTGCATGGAATGCGGGACGTGTCGCGTCGTGTGCTCCAAGACGGGCGATATCGAATGG
CAGTATCCGCGTGGTGGATACGGTGTCCTTTTCAAGTTCGGTTAA

Upstream 100 bases:

>100_bases
AAGAAGGCCAAGGAATCTGAAATTCTGAAGAATGCATGGCGCGCGCACAGGTGTCGCGGGCCTGCTGGGTGACGCAATTC
AAACTGGCGAGGGCATGGCG

Downstream 100 bases:

>100_bases
CGGGCTGCCGCCTCTGCCGGCGACGCTGATCGATGCGTTGCTGGCCGAGGACGTGCCCTTTGGCGACCTGACGACACGGG
CGCTGGGCATCGGCGGGCAG

Product: ferredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 94; Mature: 93

Protein sequence:

>94_residues
MSDRVEDRLFQNRYVVDVGRPHITVRPHETPSQALLVMTRICPAGCYSQNEQGQVEVAADGCMECGTCRVVCSKTGDIEW
QYPRGGYGVLFKFG

Sequences:

>Translated_94_residues
MSDRVEDRLFQNRYVVDVGRPHITVRPHETPSQALLVMTRICPAGCYSQNEQGQVEVAADGCMECGTCRVVCSKTGDIEW
QYPRGGYGVLFKFG
>Mature_93_residues
SDRVEDRLFQNRYVVDVGRPHITVRPHETPSQALLVMTRICPAGCYSQNEQGQVEVAADGCMECGTCRVVCSKTGDIEWQ
YPRGGYGVLFKFG

Specific function: Could be a 3Fe-4S cluster-containing protein [H]

COG id: COG2440

COG function: function code C; Ferredoxin-like protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To ferredoxins from P.putida and C.tartarivorum, ferredoxin I from A.vinelandii, ferredoxin II from D.desulfuricans [H]

Homologues:

Organism=Escherichia coli, GI1787992, Length=91, Percent_Identity=39.5604395604396, Blast_Score=81, Evalue=1e-17,
Organism=Escherichia coli, GI1786228, Length=91, Percent_Identity=39.5604395604396, Blast_Score=80, Evalue=3e-17,
Organism=Escherichia coli, GI87082156, Length=74, Percent_Identity=35.1351351351351, Blast_Score=62, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR012206 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10515; Mature: 10384

Theoretical pI: Translated: 6.48; Mature: 6.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
9.6 %Cys+Met (Translated Protein)
6.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
8.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDRVEDRLFQNRYVVDVGRPHITVRPHETPSQALLVMTRICPAGCYSQNEQGQVEVAAD
CCCCHHHHHHCCCEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECC
GCMECGTCRVVCSKTGDIEWQYPRGGYGVLFKFG
CCCCCCCEEEEECCCCCEEEECCCCCEEEEEEEC
>Mature Secondary Structure 
SDRVEDRLFQNRYVVDVGRPHITVRPHETPSQALLVMTRICPAGCYSQNEQGQVEVAAD
CCCHHHHHHCCCEEEECCCCEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECC
GCMECGTCRVVCSKTGDIEWQYPRGGYGVLFKFG
CCCCCCCEEEEECCCCCEEEECCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3029021; 3031010; 11481432 [H]