Definition Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession NC_010125
Length 3,944,163

Click here to switch to the map view.

The map label for this gene is modB [H]

Identifier: 162146251

GI number: 162146251

Start: 425041

End: 425727

Strand: Reverse

Name: modB [H]

Synonym: GDI_0426

Alternate gene names: 162146251

Gene position: 425727-425041 (Counterclockwise)

Preceding gene: 162146252

Following gene: 162146250

Centisome position: 10.79

GC content: 67.25

Gene sequence:

>687_bases
ATGAGCGCAATGGCGCCCGATGTGCAGCAGGCGGCATGGCTGACCATTCGCCTGGCACTGACGACAACGCTGTTCCTGAT
GATCGTCAGCCTGCCGCTGGCGTGGTGGCTGGCACGGCCGGGTCCCTGGTGGAAACCGGTCCTGGGGGCGATCATCTCGC
TGCCGCTGGTCCTGCCGCCCAGCGTGCTGGGATATTATTTCCTGATCGCCTTCGGCCCGTCCGGTCCCGGCGGATGGGTG
GCGCGCCTGTGGGGCGGCCGCACGCTGGCCTTCAGCTTTCCGGGGCTGGTCGTCGGCTCGCTGCTCTATGTCCTGCCCTT
CGCGGTGCAGCCCATCCAGAACGCATTCCGTGCCATCGGCCGCCGCCCGATCGAGGTCGCGGCCACGCTGGGGGCCTCGC
CCTGGCGGACATTCTGGACGGTCGCCGTGCCCCTGGCATGGCCGGGTATCGTGACGGCCGCCGTCCTCGGCTTCGCCCAT
TCGGTGGGGGAATTCGGCATCGTGCTCATGATCGGCGGCGATATTCCGGGGCGTACGCGGGTCCTGTCGGTCGCGCTGTA
CGACTATGTCGAAAACGCGCGCTGGCATGACGCCAACATGATCGCCTGCGGCATGGTGCTGTTCTCGTTCATCGTGATCG
TGCTTCTGTCGGCCCTGCGCGGCGAAATCAGGAGGACTGACGCGTGA

Upstream 100 bases:

>100_bases
GGGAAGCCCACGCCTTCATGACGTTCCTGCAGGGTCCCCAGGCCAGGAAGCTGATCGAAGCGGCCGGATACGTGGTGCCC
GCGACGGCCGGTACCGCACC

Downstream 100 bases:

>100_bases
CCGATTCCTCCCTTCTGCGGGTCGCCTTTCAGGGACGGGCCGGAACGTTCGGGTACGATTTCGCGCTGGACGCACCGGCA
CAGGGCGTTACCGCGCTGTT

Product: molybdenum ABC transporter permease modB

Products: ADP; phosphate; MoO42- [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MSAMAPDVQQAAWLTIRLALTTTLFLMIVSLPLAWWLARPGPWWKPVLGAIISLPLVLPPSVLGYYFLIAFGPSGPGGWV
ARLWGGRTLAFSFPGLVVGSLLYVLPFAVQPIQNAFRAIGRRPIEVAATLGASPWRTFWTVAVPLAWPGIVTAAVLGFAH
SVGEFGIVLMIGGDIPGRTRVLSVALYDYVENARWHDANMIACGMVLFSFIVIVLLSALRGEIRRTDA

Sequences:

>Translated_228_residues
MSAMAPDVQQAAWLTIRLALTTTLFLMIVSLPLAWWLARPGPWWKPVLGAIISLPLVLPPSVLGYYFLIAFGPSGPGGWV
ARLWGGRTLAFSFPGLVVGSLLYVLPFAVQPIQNAFRAIGRRPIEVAATLGASPWRTFWTVAVPLAWPGIVTAAVLGFAH
SVGEFGIVLMIGGDIPGRTRVLSVALYDYVENARWHDANMIACGMVLFSFIVIVLLSALRGEIRRTDA
>Mature_227_residues
SAMAPDVQQAAWLTIRLALTTTLFLMIVSLPLAWWLARPGPWWKPVLGAIISLPLVLPPSVLGYYFLIAFGPSGPGGWVA
RLWGGRTLAFSFPGLVVGSLLYVLPFAVQPIQNAFRAIGRRPIEVAATLGASPWRTFWTVAVPLAWPGIVTAAVLGFAHS
VGEFGIVLMIGGDIPGRTRVLSVALYDYVENARWHDANMIACGMVLFSFIVIVLLSALRGEIRRTDA

Specific function: Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4149

COG function: function code P; ABC-type molybdate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786980, Length=219, Percent_Identity=33.3333333333333, Blast_Score=94, Evalue=7e-21,
Organism=Escherichia coli, GI1788764, Length=202, Percent_Identity=30.6930693069307, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI87082099, Length=224, Percent_Identity=27.6785714285714, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1787080, Length=204, Percent_Identity=27.4509803921569, Blast_Score=64, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515
- InterPro:   IPR011867 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24711; Mature: 24579

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAMAPDVQQAAWLTIRLALTTTLFLMIVSLPLAWWLARPGPWWKPVLGAIISLPLVLPP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCH
SVLGYYFLIAFGPSGPGGWVARLWGGRTLAFSFPGLVVGSLLYVLPFAVQPIQNAFRAIG
HHHHHHHHEEECCCCCCHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHC
RRPIEVAATLGASPWRTFWTVAVPLAWPGIVTAAVLGFAHSVGEFGIVLMIGGDIPGRTR
CCCHHHHHHCCCCCCHHHHHEEHHHHCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHH
VLSVALYDYVENARWHDANMIACGMVLFSFIVIVLLSALRGEIRRTDA
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SAMAPDVQQAAWLTIRLALTTTLFLMIVSLPLAWWLARPGPWWKPVLGAIISLPLVLPP
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCH
SVLGYYFLIAFGPSGPGGWVARLWGGRTLAFSFPGLVVGSLLYVLPFAVQPIQNAFRAIG
HHHHHHHHEEECCCCCCHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHC
RRPIEVAATLGASPWRTFWTVAVPLAWPGIVTAAVLGFAHSVGEFGIVLMIGGDIPGRTR
CCCHHHHHHCCCCCCHHHHHEEHHHHCHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHH
VLSVALYDYVENARWHDANMIACGMVLFSFIVIVLLSALRGEIRRTDA
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; MoO42- [Periplasm]; H2O [C]

Specific reaction: ATP + MoO42- [Periplasm] + H2O = ADP + phosphate + MoO42- [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8384683; 7665518 [H]