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The map label for this gene is tetR

Identifier: 162146238

GI number: 162146238

Start: 410569

End: 411072

Strand: Direct

Name: tetR

Synonym: GDI_0413

Alternate gene names: NA

Gene position: 410569-411072 (Clockwise)

Preceding gene: 162146237

Following gene: 162146239

Centisome position: 10.41

GC content: 63.89

Gene sequence:

>504_bases
ATGGAGCGCGGTTATGAGGGACTGACGATGGAGAACGTCGCCCGCCGTGCGGAAACCAGCCGTCCGGTACTGCACCGGCG
TTGGCCGAGCCGCACGGCGCTCGCGACGGCCGCACTCGCACAGCAATTCGCGCGAGCGAATATCGTCATTCCGGATATGG
GCAGTCTGCGCGACGAACTCCGTCTGCTTCTCCGGTGCATGTCGGATCGCGCCGGGTCCCGAGACCTGCAACTGTTCTTC
GACATGCAGAAGGATCTTGTCGCCGAGCGGTCGAGCTTCGCCGACATACGGGCGCGCATCGTAGATGGCAGCCAATTTCA
TGCCGTCATCGGCCGGGCCATCGAACGGGGCGAGATCGATCCCGCCCGTCTTACACCCCGGATCGCGTCGCTTCCGCTCG
ACCTCGCCCGCCACGAGATGATGATGACCTTTCAGCCCCTGTCGGAGGATGCGATCCGCGAAATCGTCGACGACATCTTC
CTGCCGCTGGTGCGTCGGATGTGA

Upstream 100 bases:

>100_bases
CAATGTATCTTAATGGAGTGCCATGAGAGTTCGAGGGCGGACACGTCGACGCGGTGCGGCGCTGGAAGAGGCGATCCTTG
AGGCCGCCTGGGCTGAAGTA

Downstream 100 bases:

>100_bases
CGGGGAAGGCACTGCGGGACCGGCATGACGCGCGGCATCCTCGTTATGCTCGCGAGAGAAAGTAATGGCGCAAGTTCGGG
GGCGGGGCGGCCGGTTGCGG

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Regulatory Protein TetR; Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR-Family Transcriptional Regulator

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MERGYEGLTMENVARRAETSRPVLHRRWPSRTALATAALAQQFARANIVIPDMGSLRDELRLLLRCMSDRAGSRDLQLFF
DMQKDLVAERSSFADIRARIVDGSQFHAVIGRAIERGEIDPARLTPRIASLPLDLARHEMMMTFQPLSEDAIREIVDDIF
LPLVRRM

Sequences:

>Translated_167_residues
MERGYEGLTMENVARRAETSRPVLHRRWPSRTALATAALAQQFARANIVIPDMGSLRDELRLLLRCMSDRAGSRDLQLFF
DMQKDLVAERSSFADIRARIVDGSQFHAVIGRAIERGEIDPARLTPRIASLPLDLARHEMMMTFQPLSEDAIREIVDDIF
LPLVRRM
>Mature_167_residues
MERGYEGLTMENVARRAETSRPVLHRRWPSRTALATAALAQQFARANIVIPDMGSLRDELRLLLRCMSDRAGSRDLQLFF
DMQKDLVAERSSFADIRARIVDGSQFHAVIGRAIERGEIDPARLTPRIASLPLDLARHEMMMTFQPLSEDAIREIVDDIF
LPLVRRM

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19075; Mature: 19075

Theoretical pI: Translated: 8.54; Mature: 8.54

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
5.4 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERGYEGLTMENVARRAETSRPVLHRRWPSRTALATAALAQQFARANIVIPDMGSLRDEL
CCCCCCCCCHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
RLLLRCMSDRAGSRDLQLFFDMQKDLVAERSSFADIRARIVDGSQFHAVIGRAIERGEID
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
PARLTPRIASLPLDLARHEMMMTFQPLSEDAIREIVDDIFLPLVRRM
HHHHCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MERGYEGLTMENVARRAETSRPVLHRRWPSRTALATAALAQQFARANIVIPDMGSLRDEL
CCCCCCCCCHHHHHHHHHHCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
RLLLRCMSDRAGSRDLQLFFDMQKDLVAERSSFADIRARIVDGSQFHAVIGRAIERGEID
HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCC
PARLTPRIASLPLDLARHEMMMTFQPLSEDAIREIVDDIFLPLVRRM
HHHHCHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA