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The map label for this gene is iolB [H]

Identifier: 162146192

GI number: 162146192

Start: 376938

End: 377738

Strand: Direct

Name: iolB [H]

Synonym: GDI_0364

Alternate gene names: 162146192

Gene position: 376938-377738 (Clockwise)

Preceding gene: 162146191

Following gene: 162146193

Centisome position: 9.56

GC content: 68.41

Gene sequence:

>801_bases
ATGCCGTCACGCCTCCTGATCCATCCCCACGCGCCGGACGATGCCGGGCGCGTGGTCTCGGTCACGCCCCAGAGCGCCGG
CTGGCGCTTCGTGGGGTTCGAGGCACGGACCCTGCGCGACGGCGCCGTGGCCGTCGGGCAGACCGACGATACCGAAATCT
GCCTGGTGCTGATCTCGGGCCGGGCGCGCGTCACGGGGGCCGATATCGATTTCGGCGTGATCGGGGAACGGACGAATCCG
TTCGACGGCCTGCCGTGGTCGGTCTACCTGCCGCCCCGTTCGGCCTGGCGGGTCCAGGCGCAGGGGCCGGTCGAACTGGC
CATCTGCGCCTCGCCCGCGCGGGGGCTCTACCCGCCGCGCCTGATCGGGCCGGACCAGGTCGGGCAACTGACCCGGGGTA
CGGGCACCAACCAGCGCCTGGTGCGCAACATCCTGCCCGACACGGCGGATGCGGAAACGCTGCTGGTGGTCGAGGTCATC
ACCCCCGGTGGCCACTGGTCCAGCTACCCGCCCCACAAGCACGACACCGACGATTTCCCGAACGAGACCTATCTGGAGGA
AACCTATTACCACCGCCTGAAGCGCGGCAGCGGCTTCGCCCTGCAACGGGTCTATACCAAGGATGGATCGCTGGACGAAG
CGATGGCGATCGCCGACGGCGACGTCGTGCTGGTGCCGAAGGGCTACCACCCGGTCGGCGCGCCGCACGGATTCGACCTG
TATTACCTGAACGTCATGGCCGGACCGGTGCGGCAATGGAAATTCACCATGGACCCCGACCAGGCCCATCTTCCCTACTG
A

Upstream 100 bases:

>100_bases
TCGAGGCCGAACAGGACCCGGCCCGCGCCAATCCGCTGACCTATGCGCGCATGGGCCGGAACTACCTTGCCAGAACACTG
CACGATGCGGGGCTGCTGTC

Downstream 100 bases:

>100_bases
TGCAGACCTGCCCAGCAGGTTACGGAGTTCCGACATGAGCCTCATCTGCCACTTCATCGGCGGCAAGCGGACCGAGGGCC
AAGGCACGCGGCGCGCGGAT

Product: myo-inositol catabolism protein

Products: NA

Alternate protein names: 5DG isomerase [H]

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MPSRLLIHPHAPDDAGRVVSVTPQSAGWRFVGFEARTLRDGAVAVGQTDDTEICLVLISGRARVTGADIDFGVIGERTNP
FDGLPWSVYLPPRSAWRVQAQGPVELAICASPARGLYPPRLIGPDQVGQLTRGTGTNQRLVRNILPDTADAETLLVVEVI
TPGGHWSSYPPHKHDTDDFPNETYLEETYYHRLKRGSGFALQRVYTKDGSLDEAMAIADGDVVLVPKGYHPVGAPHGFDL
YYLNVMAGPVRQWKFTMDPDQAHLPY

Sequences:

>Translated_266_residues
MPSRLLIHPHAPDDAGRVVSVTPQSAGWRFVGFEARTLRDGAVAVGQTDDTEICLVLISGRARVTGADIDFGVIGERTNP
FDGLPWSVYLPPRSAWRVQAQGPVELAICASPARGLYPPRLIGPDQVGQLTRGTGTNQRLVRNILPDTADAETLLVVEVI
TPGGHWSSYPPHKHDTDDFPNETYLEETYYHRLKRGSGFALQRVYTKDGSLDEAMAIADGDVVLVPKGYHPVGAPHGFDL
YYLNVMAGPVRQWKFTMDPDQAHLPY
>Mature_265_residues
PSRLLIHPHAPDDAGRVVSVTPQSAGWRFVGFEARTLRDGAVAVGQTDDTEICLVLISGRARVTGADIDFGVIGERTNPF
DGLPWSVYLPPRSAWRVQAQGPVELAICASPARGLYPPRLIGPDQVGQLTRGTGTNQRLVRNILPDTADAETLLVVEVIT
PGGHWSSYPPHKHDTDDFPNETYLEETYYHRLKRGSGFALQRVYTKDGSLDEAMAIADGDVVLVPKGYHPVGAPHGFDLY
YLNVMAGPVRQWKFTMDPDQAHLPY

Specific function: Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate) [H]

COG id: COG3718

COG function: function code G; Uncharacterized enzyme involved in inositol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isomerase iolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR021120
- InterPro:   IPR014710 [H]

Pfam domain/function: PF04962 KduI [H]

EC number: NA

Molecular weight: Translated: 29223; Mature: 29092

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSRLLIHPHAPDDAGRVVSVTPQSAGWRFVGFEARTLRDGAVAVGQTDDTEICLVLISG
CCCCEEEECCCCCCCCCEEEECCCCCCEEEEEEEEEEECCCEEEECCCCCCEEEEEEECC
RARVTGADIDFGVIGERTNPFDGLPWSVYLPPRSAWRVQAQGPVELAICASPARGLYPPR
CCEEEECCCCEEEECCCCCCCCCCCEEEEECCCCCEEEECCCCEEEEEECCCCCCCCCCC
LIGPDQVGQLTRGTGTNQRLVRNILPDTADAETLLVVEVITPGGHWSSYPPHKHDTDDFP
CCCCHHHCHHHCCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC
NETYLEETYYHRLKRGSGFALQRVYTKDGSLDEAMAIADGDVVLVPKGYHPVGAPHGFDL
CCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEECCCEEEEECCCCCCCCCCCCEE
YYLNVMAGPVRQWKFTMDPDQAHLPY
EEEEEECCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure 
PSRLLIHPHAPDDAGRVVSVTPQSAGWRFVGFEARTLRDGAVAVGQTDDTEICLVLISG
CCCEEEECCCCCCCCCEEEECCCCCCEEEEEEEEEEECCCEEEECCCCCCEEEEEEECC
RARVTGADIDFGVIGERTNPFDGLPWSVYLPPRSAWRVQAQGPVELAICASPARGLYPPR
CCEEEECCCCEEEECCCCCCCCCCCEEEEECCCCCEEEECCCCEEEEEECCCCCCCCCCC
LIGPDQVGQLTRGTGTNQRLVRNILPDTADAETLLVVEVITPGGHWSSYPPHKHDTDDFP
CCCCHHHCHHHCCCCCHHHHHHHHCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCC
NETYLEETYYHRLKRGSGFALQRVYTKDGSLDEAMAIADGDVVLVPKGYHPVGAPHGFDL
CCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCEEEEECCCEEEEECCCCCCCCCCCCEE
YYLNVMAGPVRQWKFTMDPDQAHLPY
EEEEEECCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA