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The map label for this gene is 162146135

Identifier: 162146135

GI number: 162146135

Start: 316427

End: 316822

Strand: Reverse

Name: 162146135

Synonym: GDI_0307

Alternate gene names: NA

Gene position: 316822-316427 (Counterclockwise)

Preceding gene: 162146136

Following gene: 162146134

Centisome position: 8.03

GC content: 59.09

Gene sequence:

>396_bases
ATGACCCGGATGCTCGACACCAATACGGTCAGTCACATTCTCAAGGGGCATCCGCGTGCGCTGGAGCGCCTGTCTCAGAT
CCCCATGGCGAGCGTCTGCATCTCCGTCATCACGGAAGCCGAACTGCGTTTCGGTATCGCCAAACGTCCGGAGGCGACCC
GGCTCCATCGGGTCGTGAACGAATTCCTTCAGCGCGTGGATGTCCAGCCATGGGAATCATCGACGGCCGATTCATATGGC
AACCTGCGGGCCGCGCTGGAGGCATCCGGAAAGATCGTGGGAAGTCTTGACCTCCTGATCGCCGCGCATGCCCTGGATCT
GAATTCGATCCTCGTTACGAACGACGCGGGATTCAGCAAAATCGCCCAATTGGAAACCGAGGACTGGACAGCATGA

Upstream 100 bases:

>100_bases
GCGGCGTGCCGGACGATTTCCTCAGCGACTCCGAACGCGATCAGGCACAGGACCATCGCGATCCGTTCGCCGAGGGACCG
AAGTGAGCGCCGGCTTAACA

Downstream 100 bases:

>100_bases
CCGCCCACGACCTCACCGACCCGGCATCCGACCCGTGGGGCCCCCTGCGCCGCCTGACCAGTGCCCGGATCGGCCAGGCG
CGGACCGGCGACACCGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 131; Mature: 130

Protein sequence:

>131_residues
MTRMLDTNTVSHILKGHPRALERLSQIPMASVCISVITEAELRFGIAKRPEATRLHRVVNEFLQRVDVQPWESSTADSYG
NLRAALEASGKIVGSLDLLIAAHALDLNSILVTNDAGFSKIAQLETEDWTA

Sequences:

>Translated_131_residues
MTRMLDTNTVSHILKGHPRALERLSQIPMASVCISVITEAELRFGIAKRPEATRLHRVVNEFLQRVDVQPWESSTADSYG
NLRAALEASGKIVGSLDLLIAAHALDLNSILVTNDAGFSKIAQLETEDWTA
>Mature_130_residues
TRMLDTNTVSHILKGHPRALERLSQIPMASVCISVITEAELRFGIAKRPEATRLHRVVNEFLQRVDVQPWESSTADSYGN
LRAALEASGKIVGSLDLLIAAHALDLNSILVTNDAGFSKIAQLETEDWTA

Specific function: Unknown

COG id: COG1487

COG function: function code R; Predicted nucleic acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.nodosus virulence-associated protein C (vapC) [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002716
- InterPro:   IPR006596 [H]

Pfam domain/function: PF01850 PIN [H]

EC number: NA

Molecular weight: Translated: 14396; Mature: 14264

Theoretical pI: Translated: 6.10; Mature: 6.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRMLDTNTVSHILKGHPRALERLSQIPMASVCISVITEAELRFGIAKRPEATRLHRVVN
CCCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
EFLQRVDVQPWESSTADSYGNLRAALEASGKIVGSLDLLIAAHALDLNSILVTNDAGFSK
HHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHH
IAQLETEDWTA
HHHCCCCCCCC
>Mature Secondary Structure 
TRMLDTNTVSHILKGHPRALERLSQIPMASVCISVITEAELRFGIAKRPEATRLHRVVN
CCCCCHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
EFLQRVDVQPWESSTADSYGNLRAALEASGKIVGSLDLLIAAHALDLNSILVTNDAGFSK
HHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEEECCCCHHH
IAQLETEDWTA
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]