Click here to switch to the map view.

The map label for this gene is 162146126

Identifier: 162146126

GI number: 162146126

Start: 308125

End: 308511

Strand: Reverse

Name: 162146126

Synonym: GDI_0297

Alternate gene names: NA

Gene position: 308511-308125 (Counterclockwise)

Preceding gene: 162146130

Following gene: 162146125

Centisome position: 7.82

GC content: 62.79

Gene sequence:

>387_bases
ATGGCGCGTCCTTATTCGATGGATCTTCGCGACCGGGTTGTGGCAGCCGTGGAGACAGACGGCCTCTCCTGCCACGAGGC
CGCGAAGCGCTACGGTGTAGCACCCAGCACCGCGATCCGGTGGATGCAGAGCTTTCGGCGGACCGGCAGCGTTTCCCCTG
GCCAGATGGGCGGCCACAAGCCGAAACGGCTGACGGGTGCGCATCGGGAATGGCTGATCGAGCGTTGCAAGGCGGGGGGC
TTTACCCTGCGGGGCTTGGTCGCAGAACTTGCCGGGCGCGGGCTCAGGGTCGATTATCGCTCTGTGTGGGTCTTCGTCCA
CGACGAGATCCATATGACTAGTAGCTTCAAAAAAAACACTCGTCGCAGCCGAACAGGACCGTCCTGA

Upstream 100 bases:

>100_bases
TTCTTTTAGAGCGTGATGATTTCGGTCTGAATCGGAATATGGGTACCCAGATTGCCGAAAATCTGATTCAACATGCTGTC
TGGATTGGAGGCCAGCATGG

Downstream 100 bases:

>100_bases
TGTCGCCCGACACCGGGCGCGATGGCAAAAATACCAACACCTCATAGATCCCGCCCGCCTGGTGTTCATCGATGAAACCT
GGACCAAAACCAATATGGCG

Product: transposase

Products: NA

Alternate protein names: ISSpo6 Transposase Orf A; Insertion Sequence Transposase Protein; Transposase Of Insertion Sequence; Transposase IS

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MARPYSMDLRDRVVAAVETDGLSCHEAAKRYGVAPSTAIRWMQSFRRTGSVSPGQMGGHKPKRLTGAHREWLIERCKAGG
FTLRGLVAELAGRGLRVDYRSVWVFVHDEIHMTSSFKKNTRRSRTGPS

Sequences:

>Translated_128_residues
MARPYSMDLRDRVVAAVETDGLSCHEAAKRYGVAPSTAIRWMQSFRRTGSVSPGQMGGHKPKRLTGAHREWLIERCKAGG
FTLRGLVAELAGRGLRVDYRSVWVFVHDEIHMTSSFKKNTRRSRTGPS
>Mature_127_residues
ARPYSMDLRDRVVAAVETDGLSCHEAAKRYGVAPSTAIRWMQSFRRTGSVSPGQMGGHKPKRLTGAHREWLIERCKAGGF
TLRGLVAELAGRGLRVDYRSVWVFVHDEIHMTSSFKKNTRRSRTGPS

Specific function: Unknown

COG id: COG3415

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14360; Mature: 14228

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARPYSMDLRDRVVAAVETDGLSCHEAAKRYGVAPSTAIRWMQSFRRTGSVSPGQMGGHK
CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
PKRLTGAHREWLIERCKAGGFTLRGLVAELAGRGLRVDYRSVWVFVHDEIHMTSSFKKNT
CCHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEHEEEEEEEECCCHHHHHHHHHH
RRSRTGPS
HCCCCCCC
>Mature Secondary Structure 
ARPYSMDLRDRVVAAVETDGLSCHEAAKRYGVAPSTAIRWMQSFRRTGSVSPGQMGGHK
CCCCCCCHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCC
PKRLTGAHREWLIERCKAGGFTLRGLVAELAGRGLRVDYRSVWVFVHDEIHMTSSFKKNT
CCHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEHEEEEEEEECCCHHHHHHHHHH
RRSRTGPS
HCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA