Definition Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome.
Accession NC_010125
Length 3,944,163

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The map label for this gene is yahD [C]

Identifier: 162146114

GI number: 162146114

Start: 292597

End: 293121

Strand: Reverse

Name: yahD [C]

Synonym: GDI_0283

Alternate gene names: 162146114

Gene position: 293121-292597 (Counterclockwise)

Preceding gene: 162146125

Following gene: 162146113

Centisome position: 7.43

GC content: 71.81

Gene sequence:

>525_bases
ATGATGAACCAGACGCCGTCCCCCGCCCCGGACCAATTCAGCGCCGACGACATCGCGGGCCTGTTCCTGGACGCGGCGCG
GGACGGGCAGACCGACCTGGTCGCCGCCTTCCTGGAGGCCGGGATCAACCCCGACACCTGCAACGATCGCGGGCATTCCG
CCCTGATCCTGGCGGCGTACAACAGCCATGCCGAAACCGTCGCCTGCCTGATCAAGGGGGGTGCCACGGTCGACCTGCGC
GACGGCAAGGGGGCGACGGCGCTGGCCGGCGTGGCCTTCAAGGGCGACGTGGAGGTGGCGCGGCAACTGGTGGCGGCCGG
CGCCGCGATCGACGCGCCGAACCATGTGGGGCGGACGCCGCTGATGTTCGCCACCATGTTCAACCGCGCGCCGATGGCCG
CCTTCCTGCTGGAATGCGGGGCCGATCCCGACTACCGGGACGGCGAGGGCGACAGCCCCCGGCTGCTGGCCGCGCGGAAC
GGATTGGCCGCGCTGACGACGCTGATGCCGGCGGCGCGTTCCTGA

Upstream 100 bases:

>100_bases
GGGAATGCCGGGCCTTCGCCGCCGCGGCGCAGCCCCTACTCGCACAGCAGGCGGCCCGCTGATAGGATCGGGGCCCCGAT
TCACCCGACTCCCCGAGGCC

Downstream 100 bases:

>100_bases
CCGCGTTCCGTTCCCGAGGATGATCCTCTAGAAGGGCACGTCCTTTCCTTCCCGCCAGCGGAACCTGTCATGAGCCGTTT
CTGGAGCCCCGTCGTCCACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 174

Protein sequence:

>174_residues
MMNQTPSPAPDQFSADDIAGLFLDAARDGQTDLVAAFLEAGINPDTCNDRGHSALILAAYNSHAETVACLIKGGATVDLR
DGKGATALAGVAFKGDVEVARQLVAAGAAIDAPNHVGRTPLMFATMFNRAPMAAFLLECGADPDYRDGEGDSPRLLAARN
GLAALTTLMPAARS

Sequences:

>Translated_174_residues
MMNQTPSPAPDQFSADDIAGLFLDAARDGQTDLVAAFLEAGINPDTCNDRGHSALILAAYNSHAETVACLIKGGATVDLR
DGKGATALAGVAFKGDVEVARQLVAAGAAIDAPNHVGRTPLMFATMFNRAPMAAFLLECGADPDYRDGEGDSPRLLAARN
GLAALTTLMPAARS
>Mature_174_residues
MMNQTPSPAPDQFSADDIAGLFLDAARDGQTDLVAAFLEAGINPDTCNDRGHSALILAAYNSHAETVACLIKGGATVDLR
DGKGATALAGVAFKGDVEVARQLVAAGAAIDAPNHVGRTPLMFATMFNRAPMAAFLLECGADPDYRDGEGDSPRLLAARN
GLAALTTLMPAARS

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 ANK repeats [H]

Homologues:

Organism=Homo sapiens, GI224465233, Length=150, Percent_Identity=34.6666666666667, Blast_Score=87, Evalue=7e-18,
Organism=Homo sapiens, GI52426737, Length=140, Percent_Identity=39.2857142857143, Blast_Score=87, Evalue=8e-18,
Organism=Homo sapiens, GI188595682, Length=140, Percent_Identity=39.2857142857143, Blast_Score=87, Evalue=8e-18,
Organism=Homo sapiens, GI52426735, Length=140, Percent_Identity=39.2857142857143, Blast_Score=86, Evalue=1e-17,
Organism=Homo sapiens, GI70780355, Length=149, Percent_Identity=35.5704697986577, Blast_Score=83, Evalue=1e-16,
Organism=Homo sapiens, GI70780353, Length=149, Percent_Identity=35.5704697986577, Blast_Score=83, Evalue=1e-16,
Organism=Homo sapiens, GI70780359, Length=149, Percent_Identity=35.5704697986577, Blast_Score=83, Evalue=1e-16,
Organism=Homo sapiens, GI70780357, Length=149, Percent_Identity=35.5704697986577, Blast_Score=83, Evalue=1e-16,
Organism=Homo sapiens, GI215598574, Length=145, Percent_Identity=35.8620689655172, Blast_Score=82, Evalue=3e-16,
Organism=Homo sapiens, GI62988328, Length=151, Percent_Identity=33.7748344370861, Blast_Score=80, Evalue=6e-16,
Organism=Homo sapiens, GI268607595, Length=151, Percent_Identity=33.7748344370861, Blast_Score=80, Evalue=8e-16,
Organism=Homo sapiens, GI157739945, Length=154, Percent_Identity=33.1168831168831, Blast_Score=80, Evalue=1e-15,
Organism=Homo sapiens, GI32967601, Length=148, Percent_Identity=33.1081081081081, Blast_Score=79, Evalue=2e-15,
Organism=Homo sapiens, GI225543463, Length=151, Percent_Identity=33.7748344370861, Blast_Score=78, Evalue=4e-15,
Organism=Homo sapiens, GI225543461, Length=151, Percent_Identity=33.7748344370861, Blast_Score=77, Evalue=8e-15,
Organism=Homo sapiens, GI41327752, Length=141, Percent_Identity=32.6241134751773, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI38683807, Length=150, Percent_Identity=34, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI46519151, Length=152, Percent_Identity=33.5526315789474, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI38327522, Length=149, Percent_Identity=30.2013422818792, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI46519154, Length=152, Percent_Identity=33.5526315789474, Blast_Score=73, Evalue=1e-13,
Organism=Homo sapiens, GI38683816, Length=150, Percent_Identity=34, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI46519147, Length=150, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI37620163, Length=150, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=2e-13,
Organism=Homo sapiens, GI39812133, Length=131, Percent_Identity=32.0610687022901, Blast_Score=69, Evalue=2e-12,
Organism=Homo sapiens, GI18252778, Length=150, Percent_Identity=30, Blast_Score=67, Evalue=6e-12,
Organism=Homo sapiens, GI68131557, Length=141, Percent_Identity=31.2056737588652, Blast_Score=67, Evalue=6e-12,
Organism=Homo sapiens, GI34304379, Length=160, Percent_Identity=32.5, Blast_Score=67, Evalue=7e-12,
Organism=Homo sapiens, GI194018403, Length=132, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=8e-12,
Organism=Homo sapiens, GI55741641, Length=149, Percent_Identity=29.5302013422819, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI34304381, Length=160, Percent_Identity=32.5, Blast_Score=66, Evalue=1e-11,
Organism=Homo sapiens, GI24233530, Length=141, Percent_Identity=32.6241134751773, Blast_Score=66, Evalue=1e-11,
Organism=Homo sapiens, GI18079216, Length=162, Percent_Identity=29.0123456790123, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI55742857, Length=148, Percent_Identity=33.1081081081081, Blast_Score=65, Evalue=2e-11,
Organism=Homo sapiens, GI148596917, Length=150, Percent_Identity=30, Blast_Score=65, Evalue=3e-11,
Organism=Homo sapiens, GI13376842, Length=173, Percent_Identity=32.3699421965318, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI89363047, Length=138, Percent_Identity=30.4347826086957, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI224809478, Length=137, Percent_Identity=29.9270072992701, Blast_Score=64, Evalue=5e-11,
Organism=Homo sapiens, GI224809476, Length=137, Percent_Identity=29.9270072992701, Blast_Score=64, Evalue=5e-11,
Organism=Homo sapiens, GI224809474, Length=137, Percent_Identity=29.9270072992701, Blast_Score=64, Evalue=5e-11,
Organism=Homo sapiens, GI224809472, Length=137, Percent_Identity=29.9270072992701, Blast_Score=64, Evalue=5e-11,
Organism=Homo sapiens, GI224809470, Length=137, Percent_Identity=29.9270072992701, Blast_Score=64, Evalue=5e-11,
Organism=Homo sapiens, GI224809468, Length=137, Percent_Identity=29.9270072992701, Blast_Score=64, Evalue=5e-11,
Organism=Homo sapiens, GI157743284, Length=147, Percent_Identity=30.6122448979592, Blast_Score=64, Evalue=7e-11,
Organism=Homo sapiens, GI304361760, Length=133, Percent_Identity=30.8270676691729, Blast_Score=64, Evalue=9e-11,
Organism=Homo sapiens, GI304361757, Length=133, Percent_Identity=30.8270676691729, Blast_Score=64, Evalue=9e-11,
Organism=Homo sapiens, GI223634006, Length=131, Percent_Identity=35.8778625954198, Blast_Score=64, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI71981411, Length=158, Percent_Identity=34.8101265822785, Blast_Score=71, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI71981414, Length=140, Percent_Identity=35, Blast_Score=70, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI71981389, Length=140, Percent_Identity=35, Blast_Score=70, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI25145251, Length=140, Percent_Identity=35, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17542700, Length=140, Percent_Identity=35, Blast_Score=70, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI212645194, Length=154, Percent_Identity=31.8181818181818, Blast_Score=67, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI212646033, Length=156, Percent_Identity=32.6923076923077, Blast_Score=63, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI212646031, Length=156, Percent_Identity=32.6923076923077, Blast_Score=63, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI212646035, Length=156, Percent_Identity=32.6923076923077, Blast_Score=63, Evalue=7e-11,
Organism=Drosophila melanogaster, GI161082099, Length=146, Percent_Identity=36.3013698630137, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI161082085, Length=146, Percent_Identity=36.3013698630137, Blast_Score=76, Evalue=1e-14,
Organism=Drosophila melanogaster, GI28571867, Length=150, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI28571865, Length=150, Percent_Identity=33.3333333333333, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI161082110, Length=146, Percent_Identity=36.3013698630137, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI161082096, Length=146, Percent_Identity=36.3013698630137, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI161082081, Length=146, Percent_Identity=36.3013698630137, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI161082106, Length=146, Percent_Identity=36.3013698630137, Blast_Score=75, Evalue=2e-14,
Organism=Drosophila melanogaster, GI161082089, Length=146, Percent_Identity=36.3013698630137, Blast_Score=75, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24650843, Length=148, Percent_Identity=31.0810810810811, Blast_Score=70, Evalue=6e-13,
Organism=Drosophila melanogaster, GI161082092, Length=148, Percent_Identity=33.7837837837838, Blast_Score=70, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24663091, Length=146, Percent_Identity=34.2465753424658, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24663102, Length=146, Percent_Identity=34.2465753424658, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24663106, Length=146, Percent_Identity=34.2465753424658, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24663095, Length=146, Percent_Identity=34.2465753424658, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21357681, Length=146, Percent_Identity=34.2465753424658, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281359521, Length=142, Percent_Identity=33.0985915492958, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI281359519, Length=142, Percent_Identity=33.0985915492958, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28558752, Length=142, Percent_Identity=33.0985915492958, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28558750, Length=142, Percent_Identity=33.0985915492958, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28558756, Length=142, Percent_Identity=33.0985915492958, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI28558754, Length=142, Percent_Identity=33.0985915492958, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24581260, Length=137, Percent_Identity=30.6569343065693, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24581258, Length=137, Percent_Identity=30.6569343065693, Blast_Score=64, Evalue=7e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683 [H]

Pfam domain/function: PF00023 Ank [H]

EC number: NA

Molecular weight: Translated: 17928; Mature: 17928

Theoretical pI: Translated: 4.47; Mature: 4.47

Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure: 

>Translated Secondary Structure
MMNQTPSPAPDQFSADDIAGLFLDAARDGQTDLVAAFLEAGINPDTCNDRGHSALILAAY
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEE
NSHAETVACLIKGGATVDLRDGKGATALAGVAFKGDVEVARQLVAAGAAIDAPNHVGRTP
CCCCCEEEEEECCCCEEEEECCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCH
LMFATMFNRAPMAAFLLECGADPDYRDGEGDSPRLLAARNGLAALTTLMPAARS
HHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCC
>Mature Secondary Structure
MMNQTPSPAPDQFSADDIAGLFLDAARDGQTDLVAAFLEAGINPDTCNDRGHSALILAAY
CCCCCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEEEE
NSHAETVACLIKGGATVDLRDGKGATALAGVAFKGDVEVARQLVAAGAAIDAPNHVGRTP
CCCCCEEEEEECCCCEEEEECCCCCEEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCH
LMFATMFNRAPMAAFLLECGADPDYRDGEGDSPRLLAARNGLAALTTLMPAARS
HHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]