| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is btuB [C]
Identifier: 162146085
GI number: 162146085
Start: 263698
End: 266286
Strand: Direct
Name: btuB [C]
Synonym: GDI_0254
Alternate gene names: 162146085
Gene position: 263698-266286 (Clockwise)
Preceding gene: 162146082
Following gene: 162146086
Centisome position: 6.69
GC content: 64.93
Gene sequence:
>2589_bases GTGGCGGTCTATTCGGACCATGCCATCACGTTGATGGCGGCCCTGCTGCTGTCCGTCGCACCGGTCAAGGGATTCGGCGC CACCACCGAAGCCGGCCCCGACGCATCCTCGAAGCCTACCTCCAAGACCCCCTCGAAATCCACGGCGGGCAAGGCGGTGC GCGGCGTGGCGGTACCGCCGGGGAAGACGGCCGGCGCCAGTTCCGGCCTCGCCCATGTCGGCGCCGGCGAGGAAATCGTC GCGACGGGTGCCGCCGACAGGATCTCGCCGGCCTTTCGCGTCGCGACGCTGACCAACAGCACGGTCCGCGTCGCCGTCGT CACGGCCGCGCAACTGCTGCAGACCGGCCAGACCAACGTGATCTCAGCCCTGCAGATGACGTCGCCCGAAATCAACGCGC CACCGGGCGGCGGCGGCGGCGCGTATTCGACAACCCCGACGCAGACCGTCATCCTTCGCAACCTCAACGCGGACGAAACC CTGGTGCTGGTCAATGGGGTACGCCGGCATATCAGTGCGCTGGGCAATTGGGGCGACGGGCCGGCCGAGGGCACGGAACC CGCCGACCTCAGCCTGATCCCGCTCAGCGCGATCGACCATGTCGAGATCATCACCGAGGGCGCCACCGCCCTGTACGGGC AGGACGCGCTGGGCGGCGCGGTCAACATCGTCCTGAAATCGGGCGCGCGCAACGGCGGCACCGCCAACCTGATGAACAGC GGCTATTATCGCGGTGACGGGCAGGCCATCGAAGGCTACGGCGACATCGAGCGGACCATCGGCCACCGGGGCGGCGGCAT CGATATCGCCTGGCAGGTCCTGAACCAGTTGCCCACCCATCGCGACGGCCTGAACACGGCCACCCTCTATGGGCCGCAGG ATGCCGCATTGCAGCAAAAGGTCGGGCAGGACGTGAACCGCGTCGAAGGGCTCAGCAAGTCCCTTGCGGAAGTCTTCAGT TTCAACGGCCATGTTCCCGTCACGGATCGCGTGGACGCCTACCTGACCGGAACGCTCGGCCACCGGACCACGGACCGGGT CGGGTTCCCACGCGGCCCGGCCAACAACAATAACGTCCGCGCGATCTACCCGAACGGCTTCGCCCCGATCGAAACGTTCG ATGAACTCGATTTCCAGGTGAATGGCGGCCTGCGGGGCGTGCTGCCGCTGGGCGTAAGCTGGAACACCTATTCCTCGTTC GGGCGCGAGCAGGTGAACGAGGACGTGGAGAATGACCTCAATCCCACCTTCGGCGCCCAGAGCCAGACGAATTTCCACCA GGGTACCATCGTCGCGTCCGAATTGATCGGCGGCGCCAAATTCTCCAAGGAATTCCGCAGCGCCGCGCTGCCGAAGCCCG CCGTCCTGGATTTCGGACTGGAATACCGGCACGATACCTATCAGCTGGGACAGGGCGATTATCAATCCTGGGCCACCGGG CCGGTCCTGATCGGCCAGACCGGCGTGCAGCCCAGTTCGGGCGCCGTCGGCTATGCCGGCTTCGAACCCGTGAACGCGGG CAACTGGTCGCGCGACATCTTCGACGGCCATGTCGGCCTGGACATTTTCGTGACGAAGAAATGGGAATGGACGATCGGCG GCCGCGCCGTCAGCTATTCGGACCTGGGCGCCGCGCCGACCGGGTCGATCGGAACGCGGTATAATTTCAGCCGTCGTTTC GCCTTGCGCGCCAACGTCAATACCGGCTATCGCGCCCCCACGCTCGGCGCCGTCCATTACAACGCGACCTCGACCGGCCC GGGCGAGGTGACCGAGAACCTGTCCGATTTCGACCCGACCGCCAGGCTGCTCGGCGCGACCGGCGTGAAGGGCGAATCCT CGCGCAGCTACAATATCGGCTTCGACTGGACGCCGCTGGATTCGCTGCACCTGTCGCTGGACGGCTACCGGATCGACATC AACGACCGGATCGAAAGCACGACCGAATTTTCCGGGCCGCTGATGAACCAGTTCCTCTACAGCCAGGGAATCACTTCCAG CCCGACCGACAAGATCTACGTCACGTACATGACCAATATCGGCAATACGACGACGAACGGCTTTACCGGCAAGATCAGCT ACCAGTTCCCGGTCGATCCGTCCTGGGGCAAGCTGGTCGGCACCGTGATGGCGAACGCCGCGGACACGGAAGTCACGCAT TACGCCAGCACGCCCGCGATCCTCGGCCAGTTGGGGCAGACCTATTTCGACAGCCTGTCGCGCAACAACCTGCTGCGCGC ATCGCCCAAGAACAAGGAATCCTTCGCGCTGGACTGGTCCAGGGGGCGCTACAGCGTATACGTGCAGGAACAGCGCTATG CCGGCGTGGAATGGATCAACTACAGCGGCGATCCGGCATCGACATGGACGCATATCCGTCCGCAGGTCCAGACCAACGTC GAATTCAGCGCCCGGGTGGGCAGGGGCTTCACCCTGACGGTCGGGGCCAACAACCTGTTCAACAAATACCCGACCCACGT CAAGCGCAGCACCGTGGCCGAGACCCAGGGAACGATCGCCTATCCCATGACCGCCCCGGGCGGCTACGAAGGCGGATATT ACTATGCCCGGGTCGGCTACGTGTTCTGA
Upstream 100 bases:
>100_bases CAACTAAAAATTATCGTTGATTTGGAATCCCGTTGATGAGGCGATCGAGATGATGCGGAGCGGTTTCTTCCCCCGGAACG CGGCAGCGGCCAGGGGGCCG
Downstream 100 bases:
>100_bases GCCACCGCTTCGAGGGTCCCGCCGCCGGCACGGGCGGATTGCGGTTGTCGCTGCAACCTCATGGCAGGCGGTCCGTTTTC GTCCGAGATTCATGACGACG
Product: tonB-dependent receptor
Products: NA
Alternate protein names: NB-Dependent Receptor Plug; NB-Dependent Outer Membrane Receptor; Ferric Enterobactin Receptor; NB-Dependent Siderophore Receptor; NB-Dependent Receptor-Like Protein; NB Dependent Receptor Protein; Outer Membrane Receptor Protein; NB-Dependent Receptor For Fe; Nb-Dependent Receptor; NB-Dependent Receptor Domain Protein; Nb-Dependent Outer Membrane Receptor Protein; Outer Membrane Protein; NB Dependent Receptor; Outer Membrane Siderophore Receptor; Vitamin; Outer Membrane Receptor Family Protein; Ferric Enterobactin Receptor Protein; Aminotransferase Class V Family; NB-Dependent Outer Membrane Siderophore Receptor; NB-Dependent Membrane Receptor Protein; Outer Membrane nB-Dependent Receptor; NB-Dependent Sideophore Receptor; Enterobactin Receptor; NB Dependent Ferric Enterobactin Receptor; Secreted nB-Dependent Receptor; Outer Membrane Receptor Proteins
Number of amino acids: Translated: 862; Mature: 861
Protein sequence:
>862_residues MAVYSDHAITLMAALLLSVAPVKGFGATTEAGPDASSKPTSKTPSKSTAGKAVRGVAVPPGKTAGASSGLAHVGAGEEIV ATGAADRISPAFRVATLTNSTVRVAVVTAAQLLQTGQTNVISALQMTSPEINAPPGGGGGAYSTTPTQTVILRNLNADET LVLVNGVRRHISALGNWGDGPAEGTEPADLSLIPLSAIDHVEIITEGATALYGQDALGGAVNIVLKSGARNGGTANLMNS GYYRGDGQAIEGYGDIERTIGHRGGGIDIAWQVLNQLPTHRDGLNTATLYGPQDAALQQKVGQDVNRVEGLSKSLAEVFS FNGHVPVTDRVDAYLTGTLGHRTTDRVGFPRGPANNNNVRAIYPNGFAPIETFDELDFQVNGGLRGVLPLGVSWNTYSSF GREQVNEDVENDLNPTFGAQSQTNFHQGTIVASELIGGAKFSKEFRSAALPKPAVLDFGLEYRHDTYQLGQGDYQSWATG PVLIGQTGVQPSSGAVGYAGFEPVNAGNWSRDIFDGHVGLDIFVTKKWEWTIGGRAVSYSDLGAAPTGSIGTRYNFSRRF ALRANVNTGYRAPTLGAVHYNATSTGPGEVTENLSDFDPTARLLGATGVKGESSRSYNIGFDWTPLDSLHLSLDGYRIDI NDRIESTTEFSGPLMNQFLYSQGITSSPTDKIYVTYMTNIGNTTTNGFTGKISYQFPVDPSWGKLVGTVMANAADTEVTH YASTPAILGQLGQTYFDSLSRNNLLRASPKNKESFALDWSRGRYSVYVQEQRYAGVEWINYSGDPASTWTHIRPQVQTNV EFSARVGRGFTLTVGANNLFNKYPTHVKRSTVAETQGTIAYPMTAPGGYEGGYYYARVGYVF
Sequences:
>Translated_862_residues MAVYSDHAITLMAALLLSVAPVKGFGATTEAGPDASSKPTSKTPSKSTAGKAVRGVAVPPGKTAGASSGLAHVGAGEEIV ATGAADRISPAFRVATLTNSTVRVAVVTAAQLLQTGQTNVISALQMTSPEINAPPGGGGGAYSTTPTQTVILRNLNADET LVLVNGVRRHISALGNWGDGPAEGTEPADLSLIPLSAIDHVEIITEGATALYGQDALGGAVNIVLKSGARNGGTANLMNS GYYRGDGQAIEGYGDIERTIGHRGGGIDIAWQVLNQLPTHRDGLNTATLYGPQDAALQQKVGQDVNRVEGLSKSLAEVFS FNGHVPVTDRVDAYLTGTLGHRTTDRVGFPRGPANNNNVRAIYPNGFAPIETFDELDFQVNGGLRGVLPLGVSWNTYSSF GREQVNEDVENDLNPTFGAQSQTNFHQGTIVASELIGGAKFSKEFRSAALPKPAVLDFGLEYRHDTYQLGQGDYQSWATG PVLIGQTGVQPSSGAVGYAGFEPVNAGNWSRDIFDGHVGLDIFVTKKWEWTIGGRAVSYSDLGAAPTGSIGTRYNFSRRF ALRANVNTGYRAPTLGAVHYNATSTGPGEVTENLSDFDPTARLLGATGVKGESSRSYNIGFDWTPLDSLHLSLDGYRIDI NDRIESTTEFSGPLMNQFLYSQGITSSPTDKIYVTYMTNIGNTTTNGFTGKISYQFPVDPSWGKLVGTVMANAADTEVTH YASTPAILGQLGQTYFDSLSRNNLLRASPKNKESFALDWSRGRYSVYVQEQRYAGVEWINYSGDPASTWTHIRPQVQTNV EFSARVGRGFTLTVGANNLFNKYPTHVKRSTVAETQGTIAYPMTAPGGYEGGYYYARVGYVF >Mature_861_residues AVYSDHAITLMAALLLSVAPVKGFGATTEAGPDASSKPTSKTPSKSTAGKAVRGVAVPPGKTAGASSGLAHVGAGEEIVA TGAADRISPAFRVATLTNSTVRVAVVTAAQLLQTGQTNVISALQMTSPEINAPPGGGGGAYSTTPTQTVILRNLNADETL VLVNGVRRHISALGNWGDGPAEGTEPADLSLIPLSAIDHVEIITEGATALYGQDALGGAVNIVLKSGARNGGTANLMNSG YYRGDGQAIEGYGDIERTIGHRGGGIDIAWQVLNQLPTHRDGLNTATLYGPQDAALQQKVGQDVNRVEGLSKSLAEVFSF NGHVPVTDRVDAYLTGTLGHRTTDRVGFPRGPANNNNVRAIYPNGFAPIETFDELDFQVNGGLRGVLPLGVSWNTYSSFG REQVNEDVENDLNPTFGAQSQTNFHQGTIVASELIGGAKFSKEFRSAALPKPAVLDFGLEYRHDTYQLGQGDYQSWATGP VLIGQTGVQPSSGAVGYAGFEPVNAGNWSRDIFDGHVGLDIFVTKKWEWTIGGRAVSYSDLGAAPTGSIGTRYNFSRRFA LRANVNTGYRAPTLGAVHYNATSTGPGEVTENLSDFDPTARLLGATGVKGESSRSYNIGFDWTPLDSLHLSLDGYRIDIN DRIESTTEFSGPLMNQFLYSQGITSSPTDKIYVTYMTNIGNTTTNGFTGKISYQFPVDPSWGKLVGTVMANAADTEVTHY ASTPAILGQLGQTYFDSLSRNNLLRASPKNKESFALDWSRGRYSVYVQEQRYAGVEWINYSGDPASTWTHIRPQVQTNVE FSARVGRGFTLTVGANNLFNKYPTHVKRSTVAETQGTIAYPMTAPGGYEGGYYYARVGYVF
Specific function: Cobalamin Receptor Protein. Also Acts As A Receptor For Bacteriophage Bf23 And Is Necessary For The Uptake Of E Colicins. [C]
COG id: COG1629
COG function: function code P; Outer membrane receptor proteins, mostly Fe transport
Gene ontology:
Cell location: Outer Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: 100 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 91769; Mature: 91638
Theoretical pI: Translated: 6.21; Mature: 6.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAVYSDHAITLMAALLLSVAPVKGFGATTEAGPDASSKPTSKTPSKSTAGKAVRGVAVPP CCEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC GKTAGASSGLAHVGAGEEIVATGAADRISPAFRVATLTNSTVRVAVVTAAQLLQTGQTNV CCCCCCCCCCEECCCCCEEEEECCCCCCCCCEEEEEECCCEEEEEEHHHHHHHHCCCCHH ISALQMTSPEINAPPGGGGGAYSTTPTQTVILRNLNADETLVLVNGVRRHISALGNWGDG HHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEHHHHHHHHHHCCCCCC PAEGTEPADLSLIPLSAIDHVEIITEGATALYGQDALGGAVNIVLKSGARNGGTANLMNS CCCCCCCCCEEEEECCCCCCEEEEECCCCEECCCCCCCCEEEEEEECCCCCCCCEECCCC GYYRGDGQAIEGYGDIERTIGHRGGGIDIAWQVLNQLPTHRDGLNTATLYGPQDAALQQK CEECCCCCEECCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHH VGQDVNRVEGLSKSLAEVFSFNGHVPVTDRVDAYLTGTLGHRTTDRVGFPRGPANNNNVR HCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEE AIYPNGFAPIETFDELDFQVNGGLRGVLPLGVSWNTYSSFGREQVNEDVENDLNPTFGAQ EECCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC SQTNFHQGTIVASELIGGAKFSKEFRSAALPKPAVLDFGLEYRHDTYQLGQGDYQSWATG CCCCCCCCEEEHHHHHCCHHHHHHHHHHCCCCCCEEECCCCCCCCEEECCCCCCCCCCCC PVLIGQTGVQPSSGAVGYAGFEPVNAGNWSRDIFDGHVGLDIFVTKKWEWTIGGRAVSYS CEEEECCCCCCCCCCEECCCCCCCCCCCCCCHHCCCCCCEEEEEEEEEEEEECCEEEEEC DLGAAPTGSIGTRYNFSRRFALRANVNTGYRAPTLGAVHYNATSTGPGEVTENLSDFDPT CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCHHHHCHHCCCHH ARLLGATGVKGESSRSYNIGFDWTPLDSLHLSLDGYRIDINDRIESTTEFSGPLMNQFLY HHHHCCCCCCCCCCCCEECCCCCCCCCCEEEEECCEEEEECCCCCCCHHCCCHHHHHHHH SQGITSSPTDKIYVTYMTNIGNTTTNGFTGKISYQFPVDPSWGKLVGTVMANAADTEVTH HCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCEEE YASTPAILGQLGQTYFDSLSRNNLLRASPKNKESFALDWSRGRYSVYVQEQRYAGVEWIN CCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEECCCEEEEEEEECCCCCEEEEE YSGDPASTWTHIRPQVQTNVEFSARVGRGFTLTVGANNLFNKYPTHVKRSTVAETQGTIA CCCCCCCCEEEECCCEECCEEEEEECCCCEEEEECCCHHHHHCCCHHHHHHHHHCCCCEE YPMTAPGGYEGGYYYARVGYVF EEECCCCCCCCCEEEEEEEECC >Mature Secondary Structure AVYSDHAITLMAALLLSVAPVKGFGATTEAGPDASSKPTSKTPSKSTAGKAVRGVAVPP CEECCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCC GKTAGASSGLAHVGAGEEIVATGAADRISPAFRVATLTNSTVRVAVVTAAQLLQTGQTNV CCCCCCCCCCEECCCCCEEEEECCCCCCCCCEEEEEECCCEEEEEEHHHHHHHHCCCCHH ISALQMTSPEINAPPGGGGGAYSTTPTQTVILRNLNADETLVLVNGVRRHISALGNWGDG HHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEHHHHHHHHHHCCCCCC PAEGTEPADLSLIPLSAIDHVEIITEGATALYGQDALGGAVNIVLKSGARNGGTANLMNS CCCCCCCCCEEEEECCCCCCEEEEECCCCEECCCCCCCCEEEEEEECCCCCCCCEECCCC GYYRGDGQAIEGYGDIERTIGHRGGGIDIAWQVLNQLPTHRDGLNTATLYGPQDAALQQK CEECCCCCEECCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHH VGQDVNRVEGLSKSLAEVFSFNGHVPVTDRVDAYLTGTLGHRTTDRVGFPRGPANNNNVR HCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCEE AIYPNGFAPIETFDELDFQVNGGLRGVLPLGVSWNTYSSFGREQVNEDVENDLNPTFGAQ EECCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCC SQTNFHQGTIVASELIGGAKFSKEFRSAALPKPAVLDFGLEYRHDTYQLGQGDYQSWATG CCCCCCCCEEEHHHHHCCHHHHHHHHHHCCCCCCEEECCCCCCCCEEECCCCCCCCCCCC PVLIGQTGVQPSSGAVGYAGFEPVNAGNWSRDIFDGHVGLDIFVTKKWEWTIGGRAVSYS CEEEECCCCCCCCCCEECCCCCCCCCCCCCCHHCCCCCCEEEEEEEEEEEEECCEEEEEC DLGAAPTGSIGTRYNFSRRFALRANVNTGYRAPTLGAVHYNATSTGPGEVTENLSDFDPT CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCHHHHCHHCCCHH ARLLGATGVKGESSRSYNIGFDWTPLDSLHLSLDGYRIDINDRIESTTEFSGPLMNQFLY HHHHCCCCCCCCCCCCEECCCCCCCCCCEEEEECCEEEEECCCCCCCHHCCCHHHHHHHH SQGITSSPTDKIYVTYMTNIGNTTTNGFTGKISYQFPVDPSWGKLVGTVMANAADTEVTH HCCCCCCCCCEEEEEEEECCCCCCCCCEEEEEEEEECCCCCHHHHHHHHHCCCCCCCEEE YASTPAILGQLGQTYFDSLSRNNLLRASPKNKESFALDWSRGRYSVYVQEQRYAGVEWIN CCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCEEEEEECCCEEEEEEEECCCCCEEEEE YSGDPASTWTHIRPQVQTNVEFSARVGRGFTLTVGANNLFNKYPTHVKRSTVAETQGTIA CCCCCCCCEEEECCCEECCEEEEEECCCCEEEEECCCHHHHHCCCHHHHHHHHHCCCCEE YPMTAPGGYEGGYYYARVGYVF EEECCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA