Click here to switch to the map view.

The map label for this gene is 162145942

Identifier: 162145942

GI number: 162145942

Start: 113890

End: 114954

Strand: Direct

Name: 162145942

Synonym: GDI_0106

Alternate gene names: NA

Gene position: 113890-114954 (Clockwise)

Preceding gene: 162145941

Following gene: 162145943

Centisome position: 2.89

GC content: 61.5

Gene sequence:

>1065_bases
ATGCGTACGCCCGATCGGAACCAGTCCGAGCGCGCGAAGCTCGCGGTGTTCCGCGCCATCCCCGGCACACTCGCCCCGCG
CGACGCGCAGGATCTGATGGCATTTCCGTTCTTCAGCCTGTCCAAGACAGTGCGGACCGTGCCGATCGATTTCCGGACCC
CGGACGTCACCATCCGCGTGGAAGCGACCGGCGAACATGGCATGGCCACGATCTGGGATGCCGACGTGCTGATCTGGGCG
GCGAGCCAGATCGTGGAAGCACGGGACGCGGGTCGTTGCACCTCGCGTCTGATGGTGGCGACGCCGCATGAAATCCTGGC
CTTCATCGGCCGGGGCGACAGCGCGCGGGATTACCAACGGCTGGAAGCGGCTTTCGACCGGCTGCAATCCACCACGATCA
AGACCTCGCTGCGCCACGCCGGTGCGGGACAATTGCACCGGTTTTCCTGGATCAACGAATGGAAGCGGCATACCACGCAG
GAGGGCCGCGCCCGCGTGGTCGAGCTGATCCTGCCGGACTGGTTTTACCAGGCCGTGCTCGATGACGCGTTGGTGCTGAC
CATCGACCCGGCCTATTTCCGACTGACCGGCGGAATGGAGCGCTGGCTCTATCGGCTGGTCCGCAAGCATGGCGGCCGCC
AGCGCTCAGGCTGGAAATTCGATTTCCATGTCCTGCATCTCAAATCGGCCAGCCTGTCGCCATACCGTCGCTTCGCGTTC
GAACTCCGCGGCATCGTCCGGCGGCAGCCATTGCCCGGCTATCGCTTGGCGGTCGAGCGGACCGCTGACGGGTGTGAAAT
CCTGACCTTTTCTCGCGACAGGTTATCCACATCCTCATGTGGACAAACTGTGAGTCCGTCCGTGCTATCGGGAACGCCCG
AACCGGCGAAAGCCGTGACTTCGGGAACAGCGAAACCGTGCTTATGTGAACAGAAATCGCCGAATCGCGACATTGAATCA
GAGGGTTATGACGCCCTTAACTTAGAATCTAACTTAAAAGAATCTAACTTTAAGGATGTTGGCACCCCACATGATCTGTG
GAAAACCCCCGGAGAGGGGCGGTGA

Upstream 100 bases:

>100_bases
CCCATACCTCGGATACCACCGCCGGCACCGTGTCGGCCGCCGCGCGGCAAAGTCCGCTGATCCCGCCGACACCGGCGACC
TCACGCGGGAACAGACGCTG

Downstream 100 bases:

>100_bases
TCGTGGCCTTCCTCAACCAGAAGGGCGGCGTCGGCAAGACGACGCTGGCGCTGCATCTCGCGGGCCAATGGGCTCGGGAA
GGCCGGCGCGTGACGGTCAT

Product: replication protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 354; Mature: 354

Protein sequence:

>354_residues
MRTPDRNQSERAKLAVFRAIPGTLAPRDAQDLMAFPFFSLSKTVRTVPIDFRTPDVTIRVEATGEHGMATIWDADVLIWA
ASQIVEARDAGRCTSRLMVATPHEILAFIGRGDSARDYQRLEAAFDRLQSTTIKTSLRHAGAGQLHRFSWINEWKRHTTQ
EGRARVVELILPDWFYQAVLDDALVLTIDPAYFRLTGGMERWLYRLVRKHGGRQRSGWKFDFHVLHLKSASLSPYRRFAF
ELRGIVRRQPLPGYRLAVERTADGCEILTFSRDRLSTSSCGQTVSPSVLSGTPEPAKAVTSGTAKPCLCEQKSPNRDIES
EGYDALNLESNLKESNFKDVGTPHDLWKTPGEGR

Sequences:

>Translated_354_residues
MRTPDRNQSERAKLAVFRAIPGTLAPRDAQDLMAFPFFSLSKTVRTVPIDFRTPDVTIRVEATGEHGMATIWDADVLIWA
ASQIVEARDAGRCTSRLMVATPHEILAFIGRGDSARDYQRLEAAFDRLQSTTIKTSLRHAGAGQLHRFSWINEWKRHTTQ
EGRARVVELILPDWFYQAVLDDALVLTIDPAYFRLTGGMERWLYRLVRKHGGRQRSGWKFDFHVLHLKSASLSPYRRFAF
ELRGIVRRQPLPGYRLAVERTADGCEILTFSRDRLSTSSCGQTVSPSVLSGTPEPAKAVTSGTAKPCLCEQKSPNRDIES
EGYDALNLESNLKESNFKDVGTPHDLWKTPGEGR
>Mature_354_residues
MRTPDRNQSERAKLAVFRAIPGTLAPRDAQDLMAFPFFSLSKTVRTVPIDFRTPDVTIRVEATGEHGMATIWDADVLIWA
ASQIVEARDAGRCTSRLMVATPHEILAFIGRGDSARDYQRLEAAFDRLQSTTIKTSLRHAGAGQLHRFSWINEWKRHTTQ
EGRARVVELILPDWFYQAVLDDALVLTIDPAYFRLTGGMERWLYRLVRKHGGRQRSGWKFDFHVLHLKSASLSPYRRFAF
ELRGIVRRQPLPGYRLAVERTADGCEILTFSRDRLSTSSCGQTVSPSVLSGTPEPAKAVTSGTAKPCLCEQKSPNRDIES
EGYDALNLESNLKESNFKDVGTPHDLWKTPGEGR

Specific function: Unknown

COG id: COG5534

COG function: function code L; Plasmid replication initiator protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 BRCT domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001357
- InterPro:   IPR018777 [H]

Pfam domain/function: PF10134 RPA [H]

EC number: NA

Molecular weight: Translated: 39902; Mature: 39902

Theoretical pI: Translated: 9.59; Mature: 9.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTPDRNQSERAKLAVFRAIPGTLAPRDAQDLMAFPFFSLSKTVRTVPIDFRTPDVTIRV
CCCCCCCCHHHHHHHHEECCCCCCCCCCHHHHHHCCHHHHHHHHEEEEEEECCCCEEEEE
EATGEHGMATIWDADVLIWAASQIVEARDAGRCTSRLMVATPHEILAFIGRGDSARDYQR
EECCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHCEEEECHHHHHHHHCCCCCHHHHHH
LEAAFDRLQSTTIKTSLRHAGAGQLHRFSWINEWKRHTTQEGRARVVELILPDWFYQAVL
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
DDALVLTIDPAYFRLTGGMERWLYRLVRKHGGRQRSGWKFDFHVLHLKSASLSPYRRFAF
CCCEEEEECCHHEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCHHHHHHH
ELRGIVRRQPLPGYRLAVERTADGCEILTFSRDRLSTSSCGQTVSPSVLSGTPEPAKAVT
HHHHHHHCCCCCCEEEEEEECCCCCEEEEECHHHCCHHHCCCCCCCHHHCCCCCHHHHHH
SGTAKPCLCEQKSPNRDIESEGYDALNLESNLKESNFKDVGTPHDLWKTPGEGR
CCCCCCCCCCCCCCCCCCCCCCCCEECCHHCCCCCCCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MRTPDRNQSERAKLAVFRAIPGTLAPRDAQDLMAFPFFSLSKTVRTVPIDFRTPDVTIRV
CCCCCCCCHHHHHHHHEECCCCCCCCCCHHHHHHCCHHHHHHHHEEEEEEECCCCEEEEE
EATGEHGMATIWDADVLIWAASQIVEARDAGRCTSRLMVATPHEILAFIGRGDSARDYQR
EECCCCCEEEEECCHHHHHHHHHHHHHHHCCHHHHCEEEECHHHHHHHHCCCCCHHHHHH
LEAAFDRLQSTTIKTSLRHAGAGQLHRFSWINEWKRHTTQEGRARVVELILPDWFYQAVL
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
DDALVLTIDPAYFRLTGGMERWLYRLVRKHGGRQRSGWKFDFHVLHLKSASLSPYRRFAF
CCCEEEEECCHHEEECCCHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCCHHHHHHH
ELRGIVRRQPLPGYRLAVERTADGCEILTFSRDRLSTSSCGQTVSPSVLSGTPEPAKAVT
HHHHHHHCCCCCCEEEEEEECCCCCEEEEECHHHCCHHHCCCCCCCHHHCCCCCHHHHHH
SGTAKPCLCEQKSPNRDIESEGYDALNLESNLKESNFKDVGTPHDLWKTPGEGR
CCCCCCCCCCCCCCCCCCCCCCCCEECCHHCCCCCCCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12219091 [H]