| Definition | Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genome. |
|---|---|
| Accession | NC_010125 |
| Length | 3,944,163 |
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The map label for this gene is katA [H]
Identifier: 162145915
GI number: 162145915
Start: 90932
End: 92401
Strand: Reverse
Name: katA [H]
Synonym: GDI_0079
Alternate gene names: 162145915
Gene position: 92401-90932 (Counterclockwise)
Preceding gene: 162145916
Following gene: 162145914
Centisome position: 2.34
GC content: 60.07
Gene sequence:
>1470_bases ATGACGACTGAGCAGACAACAGCATATCATACGACGGAGTCCGGCATTCCCGTCTCCAGCGACGAGCATTCGCTGACTGT CGGTGCCGATGGCCCGATCCTGCTGCACGATCACTACCTGATCGAGCAGATAGCGGCATTCAATCGTGAGATGATCCCCG ACCGTCAGCCCCATGCCAAAGGCAGCGGCGCGTTCGGTCGGTTCGAAGTCACCCACGATGTCAGCCGGTATACCTGCGCC AAATTCCTGCAACCGGGCGCGAGGACGGAGGTCGTCGCGCGCTTCTCGACCGTGGCGGGAGAGGCCGGAAGCCCGGATAC GTGGCGCGATCCGCGTGGATTTGCCCTGAAATTCTATACGGAGGACGGCAATTTCGACATGGTCGGCAATAACACGCCGG TCTTCTTCGTGCGCGATCCGCTGAAATTCCAGCATTTCATCCATTCGCAGAAGCGCCGTGTGGATAACGGCCTGCGCGAC AACGACATGCAGTGGGATTTCTGGACATTGAGCCCGGAGACCGCGCATCAGGTGACATGGCTGATGGGCGACCGTGGCAT CCCGGCAAGCTGGCGCCACATGGATGGGTTTTCCAGCCACACCTATCTATGGGTGAATGCGGCTGGCGAGCGGTTCTGGG TGAAGTATCACTTCAAGACCGATCAGGGCATCAAGTGCCTGACGCAGGAGCAGGCAGGTCAGCTTGCGGGCGCGGATGCC GATTATCACCGGCGCGATCTCTATACGGCGATCAAACGTGGCGAGCATCCGAGCTGGACGCTCAAGATGCAGATCATGCC GTATGAGGACGCGAAGACCTATCGCATCAACCCGTTCGACCTGACCAAGGTCTGGCCGCAGGGCGAATATCCGCTGATTG AGGTCGGCAAGCTGACGCTCGACCGGAACCCGACGGATTTCCACTCCCAGATCGAGCAGGTCGCATTCGAGCCGAACAAT TTCGTGCCGGGAACCGGACTGTCACCCGACAAGATGCTGCTGGGGCGTTCGTTCGCCTATGCGGATGCACATCGGGCGCG GTTGGGCGTGAACTATAAGCAGATTCCGGTCAACGCGCCGAAATGTCCGGTCCATGGCTACACCAAGGGGGGCGCCATGC GGATGCGTGACGCGCATGACCCGGCCTATGTGCCAAACTCCAAAGGTGGTCCCGCGGCTGACAGGCAGCGTTTCCCCGAG AATGCGGTCTGGGCAGCGGACGGCGAATTCGTACGTGCGGCGTATACGCTTCGGCCGGACGATGACGATTTCAGCCAGGC CCATGCGCTGGTCAACCGCGTGATGGACGATGCGGCGCGTGACCGTCTGGTGAGCAATATCGTCGGGCATGTGTTGCAGG GCGTTGAGGAACCTGTTTTGTCGAGGGTGTTCGAATACTGGTCGAAGATCGACGAGACGATCGGAGCACGGGTAAAGGAA GGTGTGCTCGCCGAACGAGCAGGAGATTAA
Upstream 100 bases:
>100_bases ATTGCCCTGCGCGCGACGCTTGGAAAATCGCGCCGACACGTTTAGAAACAGAATGTCAGCGCGGATTCACATTCAGAATA ACCGTTCGAAGGAAACTGTC
Downstream 100 bases:
>100_bases GATTGTTTGGCGTTCATCCCTACGTCATAAATTCGGCCTGAGGAAACAACCCCGCAGATATCCGCGCTACGGTCATCTGC TTGGGAGACTCCACGTCGGG
Product: catalase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 489; Mature: 488
Protein sequence:
>489_residues MTTEQTTAYHTTESGIPVSSDEHSLTVGADGPILLHDHYLIEQIAAFNREMIPDRQPHAKGSGAFGRFEVTHDVSRYTCA KFLQPGARTEVVARFSTVAGEAGSPDTWRDPRGFALKFYTEDGNFDMVGNNTPVFFVRDPLKFQHFIHSQKRRVDNGLRD NDMQWDFWTLSPETAHQVTWLMGDRGIPASWRHMDGFSSHTYLWVNAAGERFWVKYHFKTDQGIKCLTQEQAGQLAGADA DYHRRDLYTAIKRGEHPSWTLKMQIMPYEDAKTYRINPFDLTKVWPQGEYPLIEVGKLTLDRNPTDFHSQIEQVAFEPNN FVPGTGLSPDKMLLGRSFAYADAHRARLGVNYKQIPVNAPKCPVHGYTKGGAMRMRDAHDPAYVPNSKGGPAADRQRFPE NAVWAADGEFVRAAYTLRPDDDDFSQAHALVNRVMDDAARDRLVSNIVGHVLQGVEEPVLSRVFEYWSKIDETIGARVKE GVLAERAGD
Sequences:
>Translated_489_residues MTTEQTTAYHTTESGIPVSSDEHSLTVGADGPILLHDHYLIEQIAAFNREMIPDRQPHAKGSGAFGRFEVTHDVSRYTCA KFLQPGARTEVVARFSTVAGEAGSPDTWRDPRGFALKFYTEDGNFDMVGNNTPVFFVRDPLKFQHFIHSQKRRVDNGLRD NDMQWDFWTLSPETAHQVTWLMGDRGIPASWRHMDGFSSHTYLWVNAAGERFWVKYHFKTDQGIKCLTQEQAGQLAGADA DYHRRDLYTAIKRGEHPSWTLKMQIMPYEDAKTYRINPFDLTKVWPQGEYPLIEVGKLTLDRNPTDFHSQIEQVAFEPNN FVPGTGLSPDKMLLGRSFAYADAHRARLGVNYKQIPVNAPKCPVHGYTKGGAMRMRDAHDPAYVPNSKGGPAADRQRFPE NAVWAADGEFVRAAYTLRPDDDDFSQAHALVNRVMDDAARDRLVSNIVGHVLQGVEEPVLSRVFEYWSKIDETIGARVKE GVLAERAGD >Mature_488_residues TTEQTTAYHTTESGIPVSSDEHSLTVGADGPILLHDHYLIEQIAAFNREMIPDRQPHAKGSGAFGRFEVTHDVSRYTCAK FLQPGARTEVVARFSTVAGEAGSPDTWRDPRGFALKFYTEDGNFDMVGNNTPVFFVRDPLKFQHFIHSQKRRVDNGLRDN DMQWDFWTLSPETAHQVTWLMGDRGIPASWRHMDGFSSHTYLWVNAAGERFWVKYHFKTDQGIKCLTQEQAGQLAGADAD YHRRDLYTAIKRGEHPSWTLKMQIMPYEDAKTYRINPFDLTKVWPQGEYPLIEVGKLTLDRNPTDFHSQIEQVAFEPNNF VPGTGLSPDKMLLGRSFAYADAHRARLGVNYKQIPVNAPKCPVHGYTKGGAMRMRDAHDPAYVPNSKGGPAADRQRFPEN AVWAADGEFVRAAYTLRPDDDDFSQAHALVNRVMDDAARDRLVSNIVGHVLQGVEEPVLSRVFEYWSKIDETIGARVKEG VLAERAGD
Specific function: Decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide [H]
COG id: COG0753
COG function: function code P; Catalase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the catalase family [H]
Homologues:
Organism=Homo sapiens, GI4557014, Length=473, Percent_Identity=48.6257928118393, Blast_Score=462, Evalue=1e-130, Organism=Escherichia coli, GI48994891, Length=384, Percent_Identity=44.7916666666667, Blast_Score=328, Evalue=5e-91, Organism=Caenorhabditis elegans, GI71998444, Length=476, Percent_Identity=47.2689075630252, Blast_Score=440, Evalue=1e-123, Organism=Caenorhabditis elegans, GI25147792, Length=480, Percent_Identity=43.75, Blast_Score=402, Evalue=1e-112, Organism=Caenorhabditis elegans, GI25151141, Length=480, Percent_Identity=43.75, Blast_Score=401, Evalue=1e-112, Organism=Saccharomyces cerevisiae, GI6320462, Length=487, Percent_Identity=44.1478439425051, Blast_Score=402, Evalue=1e-113, Organism=Saccharomyces cerevisiae, GI6321525, Length=535, Percent_Identity=35.8878504672897, Blast_Score=336, Evalue=6e-93, Organism=Drosophila melanogaster, GI17981717, Length=474, Percent_Identity=49.789029535865, Blast_Score=462, Evalue=1e-130, Organism=Drosophila melanogaster, GI19920968, Length=480, Percent_Identity=44.375, Blast_Score=417, Evalue=1e-116,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002226 - InterPro: IPR020835 - InterPro: IPR010582 - InterPro: IPR018028 - InterPro: IPR011614 [H]
Pfam domain/function: PF00199 Catalase; PF06628 Catalase-rel [H]
EC number: =1.11.1.6 [H]
Molecular weight: Translated: 55232; Mature: 55101
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00437 CATALASE_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTEQTTAYHTTESGIPVSSDEHSLTVGADGPILLHDHYLIEQIAAFNREMIPDRQPHAK CCCCCCEEEEECCCCCCCCCCCCEEEECCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCC GSGAFGRFEVTHDVSRYTCAKFLQPGARTEVVARFSTVAGEAGSPDTWRDPRGFALKFYT CCCCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE EDGNFDMVGNNTPVFFVRDPLKFQHFIHSQKRRVDNGLRDNDMQWDFWTLSPETAHQVTW CCCCEEEECCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEE LMGDRGIPASWRHMDGFSSHTYLWVNAAGERFWVKYHFKTDQGIKCLTQEQAGQLAGADA EECCCCCCCCCHHCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCHHHHHHCCCCCCCCC DYHRRDLYTAIKRGEHPSWTLKMQIMPYEDAKTYRINPFDLTKVWPQGEYPLIEVGKLTL CHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEECCEEEEEECCCCCCCEEEECEEEE DRNPTDFHSQIEQVAFEPNNFVPGTGLSPDKMLLGRSFAYADAHRARLGVNYKQIPVNAP CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCEEECCCCCC KCPVHGYTKGGAMRMRDAHDPAYVPNSKGGPAADRQRFPENAVWAADGEFVRAAYTLRPD CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHCCCCCEEECCCCEEEEEEEECCC DDDFSQAHALVNRVMDDAARDRLVSNIVGHVLQGVEEPVLSRVFEYWSKIDETIGARVKE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVLAERAGD CHHHHCCCC >Mature Secondary Structure TTEQTTAYHTTESGIPVSSDEHSLTVGADGPILLHDHYLIEQIAAFNREMIPDRQPHAK CCCCCEEEEECCCCCCCCCCCCEEEECCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCC GSGAFGRFEVTHDVSRYTCAKFLQPGARTEVVARFSTVAGEAGSPDTWRDPRGFALKFYT CCCCCEEEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEE EDGNFDMVGNNTPVFFVRDPLKFQHFIHSQKRRVDNGLRDNDMQWDFWTLSPETAHQVTW CCCCEEEECCCCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCEEEE LMGDRGIPASWRHMDGFSSHTYLWVNAAGERFWVKYHFKTDQGIKCLTQEQAGQLAGADA EECCCCCCCCCHHCCCCCCCEEEEEEECCCEEEEEEEEECCCCCCHHHHHHCCCCCCCCC DYHRRDLYTAIKRGEHPSWTLKMQIMPYEDAKTYRINPFDLTKVWPQGEYPLIEVGKLTL CHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCEEEECCEEEEEECCCCCCCEEEECEEEE DRNPTDFHSQIEQVAFEPNNFVPGTGLSPDKMLLGRSFAYADAHRARLGVNYKQIPVNAP CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCEEECCCCCC KCPVHGYTKGGAMRMRDAHDPAYVPNSKGGPAADRQRFPENAVWAADGEFVRAAYTLRPD CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHHCCCCCEEECCCCEEEEEEEECCC DDDFSQAHALVNRVMDDAARDRLVSNIVGHVLQGVEEPVLSRVFEYWSKIDETIGARVKE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVLAERAGD CHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1426241; 12454454 [H]