| Definition | Erythrobacter litoralis HTCC2594 chromosome, complete genome. |
|---|---|
| Accession | NC_007722 |
| Length | 3,052,398 |
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The map label for this gene is yhbJ [C]
Identifier: 162007987
GI number: 162007987
Start: 465514
End: 466419
Strand: Reverse
Name: yhbJ [C]
Synonym: ELI_02120
Alternate gene names: 162007987
Gene position: 466419-465514 (Counterclockwise)
Preceding gene: 85373252
Following gene: 85373250
Centisome position: 15.28
GC content: 65.23
Gene sequence:
>906_bases ATGTCCGGTCGCCTCGATGTCTTGCTAGTCACTGGAATGTCGGGTGCCGGCAAGTCCACCAGCCTGCGCGTGCTGGAGGA CCTGGGTTGGGAAACGCTCGACAATTTCCCGATCCGGCTGCTCGAACCGATGATCGGCGAAGTTCTGTCGAGCGACAATC CCGCACCGCTCGCTGTCGGCTTCGACTCGCGCACCCGTGGCTTCGTCCCCAACGAGATCATCGAATTGTGCAAGCGGCTG GTCCAGCGCGACGACCTGACGCTGACGACGCTCTTCCTCGACTGCACCAGCGAGGAGCTCGAGCGGCGTTTCAACGAGAC CCGGCGGCACCACCCGATGGCGCGCGGACGCACTGCGCTCGAAGGTATTCGTGCCGAACGCGAAGTTATGGAGCCGTTGC GGCGCTGGGCGGAGGCCGTAATCGACACCAGCGAACTGGCCGCCAACGAATTGCAGCAGCTGATCCGCGAGCAGTTCCAC CACGACGATCCGGCATCGCAATCGGTCACGGTCAGCAGCTTCGGCTTCGCGCGCGGGATGCCGCCGCTGGCGGACCTCGT TTTCGACATGCGCTTCCTCGACAACCCGCACTGGGTCGCGAACCTGCGCGAGCAGACCGGGCTCGACCCCGCCGTGGGCG AATATATCACCGCGCGGGGCGACTTCGACGAAATCTTCCAGCGCATGCGCGACCTGATCCTGGCGCTGCTCCCGCGTTAC CGCGCCCAGGGAAAGGCGTATGTCCATGTCGCCTTCGGTTGTACCGGCGGGAGACACCGCTCGGTGTTCACTGCCGAGAC CATGGCGCAGGCCTTGCGCGAGGCGGGATTTTCGCCCACTGTCGTGCATCGCAACCTGGCGTCGCGGGCTGCCGATCAGT TCGAAGGGCCGCAGGGCCGCAACTGA
Upstream 100 bases:
>100_bases ATGGCATCGACGTTGCCGGCTGACCCGGCACAAAGTCCCTATGCGCCTGGCGGCAAAAGCGCCTAGATGCAGCTGCCTCA ACACGAGTCGGAAGAAGAAC
Downstream 100 bases:
>100_bases CGCGCAGGAGGGCCGCAACGCCATGCAGGGCAACACGAGCGAGCGCATAGTTCACCCATGATTGGACTCATTCTGGTGAC CCACGGCCAGCTGGCCGAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 301; Mature: 300
Protein sequence:
>301_residues MSGRLDVLLVTGMSGAGKSTSLRVLEDLGWETLDNFPIRLLEPMIGEVLSSDNPAPLAVGFDSRTRGFVPNEIIELCKRL VQRDDLTLTTLFLDCTSEELERRFNETRRHHPMARGRTALEGIRAEREVMEPLRRWAEAVIDTSELAANELQQLIREQFH HDDPASQSVTVSSFGFARGMPPLADLVFDMRFLDNPHWVANLREQTGLDPAVGEYITARGDFDEIFQRMRDLILALLPRY RAQGKAYVHVAFGCTGGRHRSVFTAETMAQALREAGFSPTVVHRNLASRAADQFEGPQGRN
Sequences:
>Translated_301_residues MSGRLDVLLVTGMSGAGKSTSLRVLEDLGWETLDNFPIRLLEPMIGEVLSSDNPAPLAVGFDSRTRGFVPNEIIELCKRL VQRDDLTLTTLFLDCTSEELERRFNETRRHHPMARGRTALEGIRAEREVMEPLRRWAEAVIDTSELAANELQQLIREQFH HDDPASQSVTVSSFGFARGMPPLADLVFDMRFLDNPHWVANLREQTGLDPAVGEYITARGDFDEIFQRMRDLILALLPRY RAQGKAYVHVAFGCTGGRHRSVFTAETMAQALREAGFSPTVVHRNLASRAADQFEGPQGRN >Mature_300_residues SGRLDVLLVTGMSGAGKSTSLRVLEDLGWETLDNFPIRLLEPMIGEVLSSDNPAPLAVGFDSRTRGFVPNEIIELCKRLV QRDDLTLTTLFLDCTSEELERRFNETRRHHPMARGRTALEGIRAEREVMEPLRRWAEAVIDTSELAANELQQLIREQFHH DDPASQSVTVSSFGFARGMPPLADLVFDMRFLDNPHWVANLREQTGLDPAVGEYITARGDFDEIFQRMRDLILALLPRYR AQGKAYVHVAFGCTGGRHRSVFTAETMAQALREAGFSPTVVHRNLASRAADQFEGPQGRN
Specific function: Displays ATPase and GTPase activities
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family
Homologues:
Organism=Escherichia coli, GI1789598, Length=284, Percent_Identity=37.6760563380282, Blast_Score=183, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y2120_ERYLH (Q2NCS5)
Other databases:
- EMBL: CP000157 - RefSeq: YP_457313.2 - STRING: Q2NCS5 - GeneID: 3869782 - GenomeReviews: CP000157_GR - KEGG: eli:ELI_02120 - NMPDR: fig|314225.3.peg.2663 - eggNOG: COG1660 - HOGENOM: HBG289732 - PhylomeDB: Q2NCS5 - ProtClustDB: PRK05416 - BioCyc: ELIT314225:ELI_02120-MONOMER - HAMAP: MF_00636 - InterPro: IPR005337 - PIRSF: PIRSF005052
Pfam domain/function: PF03668 ATP_bind_2
EC number: NA
Molecular weight: Translated: 33820; Mature: 33689
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRLDVLLVTGMSGAGKSTSLRVLEDLGWETLDNFPIRLLEPMIGEVLSSDNPAPLAVG CCCCEEEEEEECCCCCCCCHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEE FDSRTRGFVPNEIIELCKRLVQRDDLTLTTLFLDCTSEELERRFNETRRHHPMARGRTAL CCCCCCCCCCHHHHHHHHHHHCCCCCEEEEHEECCCHHHHHHHHHHHHHHCCHHHHHHHH EGIRAEREVMEPLRRWAEAVIDTSELAANELQQLIREQFHHDDPASQSVTVSSFGFARGM HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHCCHHCCC PPLADLVFDMRFLDNPHWVANLREQTGLDPAVGEYITARGDFDEIFQRMRDLILALLPRY CHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RAQGKAYVHVAFGCTGGRHRSVFTAETMAQALREAGFSPTVVHRNLASRAADQFEGPQGR HCCCCEEEEEEEECCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC N C >Mature Secondary Structure SGRLDVLLVTGMSGAGKSTSLRVLEDLGWETLDNFPIRLLEPMIGEVLSSDNPAPLAVG CCCEEEEEEECCCCCCCCHHHHHHHHCCHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEE FDSRTRGFVPNEIIELCKRLVQRDDLTLTTLFLDCTSEELERRFNETRRHHPMARGRTAL CCCCCCCCCCHHHHHHHHHHHCCCCCEEEEHEECCCHHHHHHHHHHHHHHCCHHHHHHHH EGIRAEREVMEPLRRWAEAVIDTSELAANELQQLIREQFHHDDPASQSVTVSSFGFARGM HHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHCCHHCCC PPLADLVFDMRFLDNPHWVANLREQTGLDPAVGEYITARGDFDEIFQRMRDLILALLPRY CHHHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH RAQGKAYVHVAFGCTGGRHRSVFTAETMAQALREAGFSPTVVHRNLASRAADQFEGPQGR HCCCCEEEEEEEECCCCCCCCEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA