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The map label for this gene is udk [H]

Identifier: 161984962

GI number: 161984962

Start: 913183

End: 913824

Strand: Reverse

Name: udk [H]

Synonym: SBO_0893

Alternate gene names: 161984962

Gene position: 913824-913183 (Counterclockwise)

Preceding gene: 82543443

Following gene: 82543441

Centisome position: 20.22

GC content: 48.75

Gene sequence:

>642_bases
ATGACTGATCAGTCTCATCAGTGCGTCATTATCGGTATCGCTGGCGCATCGGCTTCCGGCAAGAGTCTTATTGCCAGTAC
CCTTTATCGTGAATTACGTGAGCAAGTCGGTGATGAACACATCGGCGTAATTCCCGAAGACTGCTATTACAAAGATCAAA
GCCATCTGTCGATGGAAGAACGCGTTAAGACCAACTACGACCATCCCAGCGCGATGGATCACAACCTGCTGCTTGAGCAT
TTACAAGCGTTGAAACGCGGCTCGGCAATTGACCTGCCGGTTTACAGCTATGTTGAACATACGCGTATGAAAGAAACGGT
GACGGTTGAGCCGAAGAAGGTCATCATTCTCGAAGGCATTTTGTTGCTGACGGATGCGCGTTTGCGTGACGAACTTAACT
TCTCCATTTTCGTTGATACCCCGCTGGATATCTGCCTGATGCGCCGCATCAAGCGTGACGTTAACGAGCGTGGGCGTTCA
ATGGATTCCGTGATGGCGCAATATCAAAAAACCGTGCGCCCGATGTTCCTGCAATTCATTGAGCCTTCTAAACAATATGC
GGACATTATCGTGCCGCGCGGCGGGAAAAACCGCATCGCGATCGATATATTGAAAGCGAAAATAAGTCAGTTCTTTGAAT
AA

Upstream 100 bases:

>100_bases
CTATTCGACTGGTATCAGGCGGATGAAATCCCTATAATTGCCGCGTTTGGCGCTTCGTCGCCCCCTTCCTAACATCCAGG
TTAATCAGGTCGCTAAATAT

Downstream 100 bases:

>100_bases
GCTTGATAAATTGTGTACCGTTCAGTGATAACCTGGTATGCCCTTGACGTAATTGGCGTTAAGGGAGTGATGCGCGAAAG
GAGAAAATGCCATGCGTCTG

Product: uridine kinase

Products: NA

Alternate protein names: Cytidine monophosphokinase; Uridine monophosphokinase [H]

Number of amino acids: Translated: 213; Mature: 212

Protein sequence:

>213_residues
MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEERVKTNYDHPSAMDHNLLLEH
LQALKRGSAIDLPVYSYVEHTRMKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRS
MDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE

Sequences:

>Translated_213_residues
MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEERVKTNYDHPSAMDHNLLLEH
LQALKRGSAIDLPVYSYVEHTRMKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRS
MDSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE
>Mature_212_residues
TDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEERVKTNYDHPSAMDHNLLLEHL
QALKRGSAIDLPVYSYVEHTRMKETVTVEPKKVIILEGILLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSM
DSVMAQYQKTVRPMFLQFIEPSKQYADIIVPRGGKNRIAIDILKAKISQFFE

Specific function: Pyrimidine salvage pathway. [C]

COG id: COG0572

COG function: function code F; Uridine kinase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the uridine kinase family [H]

Homologues:

Organism=Homo sapiens, GI18699734, Length=203, Percent_Identity=37.4384236453202, Blast_Score=160, Evalue=8e-40,
Organism=Homo sapiens, GI57863312, Length=203, Percent_Identity=39.4088669950739, Blast_Score=159, Evalue=2e-39,
Organism=Homo sapiens, GI301129207, Length=203, Percent_Identity=39.4088669950739, Blast_Score=159, Evalue=2e-39,
Organism=Homo sapiens, GI13899253, Length=211, Percent_Identity=35.5450236966825, Blast_Score=145, Evalue=2e-35,
Organism=Homo sapiens, GI209863022, Length=159, Percent_Identity=32.7044025157233, Blast_Score=94, Evalue=1e-19,
Organism=Escherichia coli, GI87082034, Length=213, Percent_Identity=99.5305164319249, Blast_Score=438, Evalue=1e-124,
Organism=Caenorhabditis elegans, GI17539894, Length=207, Percent_Identity=37.6811594202899, Blast_Score=149, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI17539892, Length=207, Percent_Identity=37.6811594202899, Blast_Score=149, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI71981181, Length=216, Percent_Identity=35.1851851851852, Blast_Score=130, Evalue=6e-31,
Organism=Saccharomyces cerevisiae, GI6324339, Length=150, Percent_Identity=34.6666666666667, Blast_Score=113, Evalue=3e-26,
Organism=Drosophila melanogaster, GI45550449, Length=203, Percent_Identity=39.4088669950739, Blast_Score=152, Evalue=2e-37,
Organism=Drosophila melanogaster, GI28573516, Length=203, Percent_Identity=39.4088669950739, Blast_Score=152, Evalue=2e-37,
Organism=Drosophila melanogaster, GI28573514, Length=203, Percent_Identity=39.4088669950739, Blast_Score=152, Evalue=2e-37,
Organism=Drosophila melanogaster, GI28573512, Length=203, Percent_Identity=39.4088669950739, Blast_Score=152, Evalue=2e-37,
Organism=Drosophila melanogaster, GI221458995, Length=219, Percent_Identity=35.1598173515982, Blast_Score=148, Evalue=2e-36,
Organism=Drosophila melanogaster, GI24649624, Length=218, Percent_Identity=34.8623853211009, Blast_Score=147, Evalue=4e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006083
- InterPro:   IPR000764 [H]

Pfam domain/function: PF00485 PRK [H]

EC number: =2.7.1.48 [H]

Molecular weight: Translated: 24381; Mature: 24249

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEE
CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHCCHHH
RVKTNYDHPSAMDHNLLLEHLQALKRGSAIDLPVYSYVEHTRMKETVTVEPKKVIILEGI
HHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEECCCEEEEEHHH
LLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFI
HHHHCHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
EPSKQYADIIVPRGGKNRIAIDILKAKISQFFE
CCCHHHHEEEECCCCCCCCHHHHHHHHHHHHCC
>Mature Secondary Structure 
TDQSHQCVIIGIAGASASGKSLIASTLYRELREQVGDEHIGVIPEDCYYKDQSHLSMEE
CCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHCCHHH
RVKTNYDHPSAMDHNLLLEHLQALKRGSAIDLPVYSYVEHTRMKETVTVEPKKVIILEGI
HHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCEEEECCCEEEEEHHH
LLLTDARLRDELNFSIFVDTPLDICLMRRIKRDVNERGRSMDSVMAQYQKTVRPMFLQFI
HHHHCHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
EPSKQYADIIVPRGGKNRIAIDILKAKISQFFE
CCCHHHHEEEECCCCCCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]