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The map label for this gene is arnF

Identifier: 161984904

GI number: 161984904

Start: 2285062

End: 2285448

Strand: Direct

Name: arnF

Synonym: SBO_2295

Alternate gene names: 161984904

Gene position: 2285062-2285448 (Clockwise)

Preceding gene: 82544739

Following gene: 161984902

Centisome position: 50.56

GC content: 48.06

Gene sequence:

>387_bases
ATGGGCCTGATATGGGGATTATTCAGCGTCATTATTGCCTCAGTTGCGCAATTAAGCCTGGGTTTTGCGGCAAGTCATCT
GCCGCCGATGACGCACTTATGGGATTTTATCGCGGCTCTGTTAGCTTTTGGCCTGGATGCCCGGATACTGTTACTCGGGC
TGCTGGGTTATCTGCTTTCCGTTTTTTGTTGGTATAAAACGCTACATAAACTTGCGCTAAGCAAAGCCTATGCCTTGCTC
AGTATGAGTTATGTGCTGGTATGGATTGCTTCAATGGTACTTCCCGGCTGGGAAGGGACTTTTTCGCTGAAAGCACTACT
GGGAGTAGCCTGTATTATGAGCGGGTTGATGCTGATTTTCCTGCCCACGACAAAACAACGTTACTGA

Upstream 100 bases:

>100_bases
TGGCTGCAGTAAAACTGTGGCACGAACCGGTATCGCCGCGTCACTGGTGTGGGGTGGCGTTCATTATTGGTGGCATTGTG
ATCCTCGGGAGTACGGTGTA

Downstream 100 bases:

>100_bases
GTTTTCCCTGCCGCTGTACACTGCCGTTCCCACTCATCGGGGCTATAACTGCTTGCCGAGAGGACTTTCACCGTATGCAG
CTTTTCACGATTAATACAAT

Product: hypothetical protein

Products: NA

Alternate protein names: L-Ara4N-phosphoundecaprenol flippase subunit ArnF; Undecaprenyl phosphate-aminoarabinose flippase subunit ArnF

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MGLIWGLFSVIIASVAQLSLGFAASHLPPMTHLWDFIAALLAFGLDARILLLGLLGYLLSVFCWYKTLHKLALSKAYALL
SMSYVLVWIASMVLPGWEGTFSLKALLGVACIMSGLMLIFLPTTKQRY

Sequences:

>Translated_128_residues
MGLIWGLFSVIIASVAQLSLGFAASHLPPMTHLWDFIAALLAFGLDARILLLGLLGYLLSVFCWYKTLHKLALSKAYALL
SMSYVLVWIASMVLPGWEGTFSLKALLGVACIMSGLMLIFLPTTKQRY
>Mature_127_residues
GLIWGLFSVIIASVAQLSLGFAASHLPPMTHLWDFIAALLAFGLDARILLLGLLGYLLSVFCWYKTLHKLALSKAYALLS
MSYVLVWIASMVLPGWEGTFSLKALLGVACIMSGLMLIFLPTTKQRY

Specific function: Translocates 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ArnF family

Homologues:

Organism=Escherichia coli, GI87082075, Length=128, Percent_Identity=99.21875, Blast_Score=247, Evalue=2e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ARNF_ECO24 (A7ZP77)

Other databases:

- EMBL:   CP000800
- RefSeq:   YP_001463606.1
- STRING:   A7ZP77
- EnsemblBacteria:   EBESCT00000022256
- GeneID:   5589357
- GenomeReviews:   CP000800_GR
- KEGG:   ecw:EcE24377A_2555
- eggNOG:   COG0697
- GeneTree:   EBGT00050000010552
- HOGENOM:   HBG682839
- OMA:   CWLAALR
- ProtClustDB:   PRK02971
- BioCyc:   ECOL331111:ECE24377A_2555-MONOMER
- GO:   GO:0006810
- HAMAP:   MF_00538
- InterPro:   IPR022832

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14067; Mature: 13936

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x19a98f1c)-; HASH(0x1aab6740)-; HASH(0x1a603a04)-; HASH(0x192cf46c)-;

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLIWGLFSVIIASVAQLSLGFAASHLPPMTHLWDFIAALLAFGLDARILLLGLLGYLLS
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
VFCWYKTLHKLALSKAYALLSMSYVLVWIASMVLPGWEGTFSLKALLGVACIMSGLMLIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LPTTKQRY
CCCCCCCH
>Mature Secondary Structure 
GLIWGLFSVIIASVAQLSLGFAASHLPPMTHLWDFIAALLAFGLDARILLLGLLGYLLS
CHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
VFCWYKTLHKLALSKAYALLSMSYVLVWIASMVLPGWEGTFSLKALLGVACIMSGLMLIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHH
LPTTKQRY
CCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA