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The map label for this gene is yfjD [H]

Identifier: 161984876

GI number: 161984876

Start: 2757634

End: 2758830

Strand: Direct

Name: yfjD [H]

Synonym: SBO_2748

Alternate gene names: 161984876

Gene position: 2757634-2758830 (Clockwise)

Preceding gene: 82545155

Following gene: 82545158

Centisome position: 61.01

GC content: 51.38

Gene sequence:

>1197_bases
ATGACCCTCAACCGCTATCGTCTGCGACATATGGCGAAACAGGGTAATCGCTCGGCCAAACGCGTCGAAAAATTGCTGCG
TAAGCCAGACCGCCTGATAAGCCTGGTGTTAATCGGCAATAACCTGGTCAATATTCTTGCCTCCGCGCTCGGCACTATTG
TCGGGATGCGTTTGTACGGCGATGCGGGCGTGGCAATTGCGACTGGTGTGCTGACTTTTGTCGTACTGGTTTTTGCTGAG
GTATTGCCGAAAACCATTGCCGCGCTGTACCCGGAAAAAGTCGCTTATCCGAGTAGTTTTCTGCTGGCTCCGCTGCAAAT
TTTGATGATGCCGCTGGTCTGGTTGCTGAATGCTATCACCCGTATGCTGATGCGCATGATGGGTATCAAAACCGATATCG
TGGTTAGCGGCTCTTTGAGCAAAGAAGAGTTGCGCACTATCGTGCATGAATCGCGCTCACAAATTTCCCGTCGCAATCAG
GATATGCTGCTGTCGGTGCTCGATCTGGAAAAAATGACCGTTGATGACATCATGGTACCGCGCAGTGAAATTATCGGTAT
TGATATCAACGATGACTGGAAATCTATTCTGCGCCAACTCTCCCACTCACCTCACGGGCGCATCGTGCTTTACCGTGATT
CGCTGGACGACGCCATCAGTATGCTGCGAGTACGTGAAGCCTGGCGGTTGATGTCGGAGAAAAAAGAGTTCACCAAAGAA
ACCATGCTGCGCGCCGCGGACGAGATCTATTTTGTGCCTGAAGGTACGCCGCTCAGCACGCAGTTGGTAAAGTTTCAGCG
CAACAAAAAGAAAGTCGGCCTGGTCGTCAACGAGTATGGAGACATTCAGGGGCTGGTGACGGTTGAAGATATTCTGGAAG
AGATTGTTGGCGATTTCACTACGTCGATGTCGCCAACACTTGCCGAAGAGGTCACGCCGCAAAACGACGGTTCGGTGATT
ATCGATGGCACCGCCAACGTGCGGGAAATCAACAAAGCCTTTAACTGGCATCTACCGGAAGATGATGCCCGCACGGTTAA
TGGCGTCATTCTTGAGGCACTGGAAGAGATCCCTGTCGCAGGCACCCGCGTGCGTATTGGCAAGTACGATATCGATATTC
TCGACGTACAGGACAATATGATTAAGCAGGTAAAAGTTTTTCCTGTGAAACCGCTGCGCGAGAGTGTGGCGGAGTAA

Upstream 100 bases:

>100_bases
GGAGTTTCCCCTGGAACACATTTCTACTACTACGTTGATCATTATTCTGATCATCATGGTGGTCATTTCAGCCTATTTTT
CCGGGTCCGAAACCGGAATG

Downstream 100 bases:

>100_bases
CGAAAACGGCCCTGCATTCGCATGCAGGGCCGTGAATTATTACGAAAACAGAAATTACGCTTTTGCTTTCGCTACAGTTA
CCATCGCCGCACGAATCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAE
VLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQ
DMLLSVLDLEKMTVDDIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKE
TMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVI
IDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGTRVRIGKYDIDILDVQDNMIKQVKVFPVKPLRESVAE

Sequences:

>Translated_398_residues
MTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAE
VLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQ
DMLLSVLDLEKMTVDDIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKE
TMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVI
IDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGTRVRIGKYDIDILDVQDNMIKQVKVFPVKPLRESVAE
>Mature_397_residues
TLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYGDAGVAIATGVLTFVVLVFAEV
LPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAITRMLMRMMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQD
MLLSVLDLEKMTVDDIMVPRSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKET
MLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFTTSMSPTLAEEVTPQNDGSVII
DGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVAGTRVRIGKYDIDILDVQDNMIKQVKVFPVKPLRESVAE

Specific function: Unknown

COG id: COG4536

COG function: function code P; Putative Mg2+ and Co2+ transporter CorB

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

Organism=Homo sapiens, GI310128564, Length=360, Percent_Identity=26.1111111111111, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI94681046, Length=315, Percent_Identity=26.031746031746, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI40068053, Length=315, Percent_Identity=23.8095238095238, Blast_Score=66, Evalue=4e-11,
Organism=Homo sapiens, GI40068055, Length=315, Percent_Identity=23.8095238095238, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI145693175, Length=398, Percent_Identity=99.748743718593, Blast_Score=804, Evalue=0.0,
Organism=Escherichia coli, GI1790664, Length=407, Percent_Identity=22.1130221130221, Blast_Score=122, Evalue=4e-29,
Organism=Escherichia coli, GI1786879, Length=250, Percent_Identity=26.4, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI87082033, Length=277, Percent_Identity=27.4368231046931, Blast_Score=92, Evalue=8e-20,
Organism=Escherichia coli, GI1788119, Length=235, Percent_Identity=29.7872340425532, Blast_Score=86, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016169
- InterPro:   IPR000644
- InterPro:   IPR002550
- InterPro:   IPR005170 [H]

Pfam domain/function: PF00571 CBS; PF03471 CorC_HlyC; PF01595 DUF21 [H]

EC number: NA

Molecular weight: Translated: 44790; Mature: 44659

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYG
CCCHHHHHHHHHHHCCCHHHHHHHHHHCHHHHEEEHEECCHHHHHHHHHHHHHHHHHHCC
DAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAIT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
RMLMRMMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKMTVDDIMVP
HHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
RSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKE
HHHEEEEECCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
TMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFT
HHHHHHHCEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHH
TSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVA
CCCCCHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
GTRVRIGKYDIDILDVQDNMIKQVKVFPVKPLRESVAE
CCEEEECEECEEEEECCHHHHHHHHCCCCCHHHHHHCC
>Mature Secondary Structure 
TLNRYRLRHMAKQGNRSAKRVEKLLRKPDRLISLVLIGNNLVNILASALGTIVGMRLYG
CCHHHHHHHHHHHCCCHHHHHHHHHHCHHHHEEEHEECCHHHHHHHHHHHHHHHHHHCC
DAGVAIATGVLTFVVLVFAEVLPKTIAALYPEKVAYPSSFLLAPLQILMMPLVWLLNAIT
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
RMLMRMMGIKTDIVVSGSLSKEELRTIVHESRSQISRRNQDMLLSVLDLEKMTVDDIMVP
HHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
RSEIIGIDINDDWKSILRQLSHSPHGRIVLYRDSLDDAISMLRVREAWRLMSEKKEFTKE
HHHEEEEECCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHH
TMLRAADEIYFVPEGTPLSTQLVKFQRNKKKVGLVVNEYGDIQGLVTVEDILEEIVGDFT
HHHHHHHCEEECCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHHH
TSMSPTLAEEVTPQNDGSVIIDGTANVREINKAFNWHLPEDDARTVNGVILEALEEIPVA
CCCCCHHHHHCCCCCCCCEEEECCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCC
GTRVRIGKYDIDILDVQDNMIKQVKVFPVKPLRESVAE
CCEEEECEECEEEEECCHHHHHHHHCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503; 3045760 [H]