Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is ulaA [H]

Identifier: 161984792

GI number: 161984792

Start: 4312229

End: 4313677

Strand: Reverse

Name: ulaA [H]

Synonym: SBO_4262

Alternate gene names: 161984792

Gene position: 4313677-4312229 (Counterclockwise)

Preceding gene: 82546568

Following gene: 82546564

Centisome position: 95.44

GC content: 52.86

Gene sequence:

>1449_bases
GTGAGTGCACAACATTCCGGGTGTGCGGAATACCCGGTTACCTCTTCTTCAGGAGATCGTCTCTACAACATCTTTACCGT
GTTTTTTAACCAGGTCATGACCAATGCCCCGTTGTTGCTGGGTATTGTGACCTGTCTGGGCTACATCCTACTGCGCAAAA
GTGTCAGCGTTATTATTAAAGGCACGATTAAAACCATAATTGGTTTCATGTTGTTGCAGGCAGGGTCCGGCATCCTCACC
AGCACCTTCAAACCGGTGGTGGCGAAAATGTCCGAAGTCTACGGCATTAACGGCGCAATTTCCGATACTTACGCGTCGAT
GATGGCAACCATCGACCGCATGGGCGATGCCTATAGCTGGGTAGGTTACGCGGTGTTGTTAGCGCTGGCGCTGAACATCT
GTTACGTGCTGCTGCGTCGCATTACCGGTATTCGTACCATCATGCTGACTGGTCATATCATGTTCCAGCAGGCGGGGCTG
ATTGCCGTTACGTTGTTTATTTTCGGCTACTCCATGTGGACAACCATTATCTGCACGGCGATTCTGGTTTCGCTCTACTG
GGGCATTACCTCCAATATGATGTACAAGCCGACTCAGGAAGTGACGGACGGCTGCGGTTTCTCCATCGGTCACCAGCAAC
AGTTTGCATCATGGATTGCCTATAAAGTTGCGCCGTTCCTCGGCAAAAAAGAGGAAAGCGTTGAAGACCTCAAACTGCCA
GGCTGGCTGAATATTTTCCACGACAACATCGTCTCCACGGCGATTGTGATGACCATCTTCTTTGGTGCCATTCTACTCTC
CTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGAACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTCG
CGGTGGCGATCTTCATCATCACTCAGGGCGTGCGCATGTTTGTGGCGGAACTCTCTGAAGCATTTAACGGTATCTCCCAG
CGCCTGATCCCTGGTGCGGTTCTGGCGATTGACTGTGCGGCTATCTATAGCTTCGCGCCGAACGCCGTGGTTTGGGGCTT
TATGTGGGGCACCATCGGTCAGCTGATTGCGGTTGGCATCCTGGTCGCCTGCGGTTCCTCGATCCTGATTATTCCCGGCT
TTATCCCGATGTTCTTCTCCAACGCCACCATCGGCGTGTTCGCTAACCACTTCGGCGGCTGGCGTGCGGCGCTGAAGATA
TGTCTGGTGATGGGGATGATTGAAATCTTTGGCTGCGTCTGGGCGGTGAAACTCACCGGTATGAGCGCCTGGATGGGCAT
GGCGGACTGGTCGATTCTGGCACCGCCGATGATGCAGGGCTTCTTCTCCATCGGTATCGCCTTTATGGCCGTCATCATTG
TAATTGCACTGGCTTATATGTTCTTCGCTGGCCGCGCACTGCGCGCAGAAGAAGATGCAGAAAAACAACTGGCAGAACAG
TCTGCTTAA

Upstream 100 bases:

>100_bases
TTTCGTTGTGTGAATCCCACTCTATCCGTATGGAATTATTTGCGGGTCGCGTCACATTTAATCATAAATAATCTTGTTGT
GATTGCTTTTGAAAATTAGA

Downstream 100 bases:

>100_bases
TAAGGAGTTTTGATTATGACCGTACGTATTCTGGCTGTGTGTGGCAACGGACAAGGCAGTTCCATGATCATGAAGATGAA
AGTGGACCAGTTTTTAACCC

Product: PTS system ascorbate-specific transporter subunit IIC

Products: NA

Alternate protein names: Ascorbate-specific PTS system EIIC component [H]

Number of amino acids: Translated: 482; Mature: 481

Protein sequence:

>482_residues
MSAQHSGCAEYPVTSSSGDRLYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILT
STFKPVVAKMSEVYGINGAISDTYASMMATIDRMGDAYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGL
IAVTLFIFGYSMWTTIICTAILVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPFLGKKEESVEDLKLP
GWLNIFHDNIVSTAIVMTIFFGAILLSFGIDTVQAMAGKVNWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQ
RLIPGAVLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGILVACGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKI
CLVMGMIEIFGCVWAVKLTGMSAWMGMADWSILAPPMMQGFFSIGIAFMAVIIVIALAYMFFAGRALRAEEDAEKQLAEQ
SA

Sequences:

>Translated_482_residues
MSAQHSGCAEYPVTSSSGDRLYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILT
STFKPVVAKMSEVYGINGAISDTYASMMATIDRMGDAYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGL
IAVTLFIFGYSMWTTIICTAILVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPFLGKKEESVEDLKLP
GWLNIFHDNIVSTAIVMTIFFGAILLSFGIDTVQAMAGKVNWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQ
RLIPGAVLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGILVACGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKI
CLVMGMIEIFGCVWAVKLTGMSAWMGMADWSILAPPMMQGFFSIGIAFMAVIIVIALAYMFFAGRALRAEEDAEKQLAEQ
SA
>Mature_481_residues
SAQHSGCAEYPVTSSSGDRLYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILTS
TFKPVVAKMSEVYGINGAISDTYASMMATIDRMGDAYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGLI
AVTLFIFGYSMWTTIICTAILVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPFLGKKEESVEDLKLPG
WLNIFHDNIVSTAIVMTIFFGAILLSFGIDTVQAMAGKVNWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQR
LIPGAVLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGILVACGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKIC
LVMGMIEIFGCVWAVKLTGMSAWMGMADWSILAPPMMQGFFSIGIAFMAVIIVIALAYMFFAGRALRAEEDAEKQLAEQS
A

Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active- transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i

COG id: COG3037

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ulaA family [H]

Homologues:

Organism=Escherichia coli, GI87082388, Length=464, Percent_Identity=99.3534482758621, Blast_Score=926, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004703 [H]

Pfam domain/function: PF03611 EIIC-GAT [H]

EC number: NA

Molecular weight: Translated: 52394; Mature: 52263

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.4 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CC
>Mature Secondary Structure 
SAQHSGCAEYPVTSSSGDRLYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIK
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
GTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGINGAISDTYASMMATIDRMGDAYSW
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHH
VGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGLIAVTLFIFGYSMWTTIICTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPFLGKKEESVEDLKLP
HHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCC
GWLNIFHDNIVSTAIVMTIFFGAILLSFGIDTVQAMAGKVNWTVYILQTGFSFAVAIFII
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEEEECCHHHHHHHHHH
TQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGI
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LVACGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGMIEIFGCVWAVKLTG
HHHCCCCEEEECCHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MSAWMGMADWSILAPPMMQGFFSIGIAFMAVIIVIALAYMFFAGRALRAEEDAEKQLAEQ
HHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHC
SA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]