| Definition | Shigella boydii Sb227, complete genome. |
|---|---|
| Accession | NC_007613 |
| Length | 4,519,823 |
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The map label for this gene is ulaA [H]
Identifier: 161984792
GI number: 161984792
Start: 4312229
End: 4313677
Strand: Reverse
Name: ulaA [H]
Synonym: SBO_4262
Alternate gene names: 161984792
Gene position: 4313677-4312229 (Counterclockwise)
Preceding gene: 82546568
Following gene: 82546564
Centisome position: 95.44
GC content: 52.86
Gene sequence:
>1449_bases GTGAGTGCACAACATTCCGGGTGTGCGGAATACCCGGTTACCTCTTCTTCAGGAGATCGTCTCTACAACATCTTTACCGT GTTTTTTAACCAGGTCATGACCAATGCCCCGTTGTTGCTGGGTATTGTGACCTGTCTGGGCTACATCCTACTGCGCAAAA GTGTCAGCGTTATTATTAAAGGCACGATTAAAACCATAATTGGTTTCATGTTGTTGCAGGCAGGGTCCGGCATCCTCACC AGCACCTTCAAACCGGTGGTGGCGAAAATGTCCGAAGTCTACGGCATTAACGGCGCAATTTCCGATACTTACGCGTCGAT GATGGCAACCATCGACCGCATGGGCGATGCCTATAGCTGGGTAGGTTACGCGGTGTTGTTAGCGCTGGCGCTGAACATCT GTTACGTGCTGCTGCGTCGCATTACCGGTATTCGTACCATCATGCTGACTGGTCATATCATGTTCCAGCAGGCGGGGCTG ATTGCCGTTACGTTGTTTATTTTCGGCTACTCCATGTGGACAACCATTATCTGCACGGCGATTCTGGTTTCGCTCTACTG GGGCATTACCTCCAATATGATGTACAAGCCGACTCAGGAAGTGACGGACGGCTGCGGTTTCTCCATCGGTCACCAGCAAC AGTTTGCATCATGGATTGCCTATAAAGTTGCGCCGTTCCTCGGCAAAAAAGAGGAAAGCGTTGAAGACCTCAAACTGCCA GGCTGGCTGAATATTTTCCACGACAACATCGTCTCCACGGCGATTGTGATGACCATCTTCTTTGGTGCCATTCTACTCTC CTTCGGTATCGACACCGTGCAGGCGATGGCAGGCAAAGTGAACTGGACGGTGTACATCCTGCAAACTGGTTTCTCCTTCG CGGTGGCGATCTTCATCATCACTCAGGGCGTGCGCATGTTTGTGGCGGAACTCTCTGAAGCATTTAACGGTATCTCCCAG CGCCTGATCCCTGGTGCGGTTCTGGCGATTGACTGTGCGGCTATCTATAGCTTCGCGCCGAACGCCGTGGTTTGGGGCTT TATGTGGGGCACCATCGGTCAGCTGATTGCGGTTGGCATCCTGGTCGCCTGCGGTTCCTCGATCCTGATTATTCCCGGCT TTATCCCGATGTTCTTCTCCAACGCCACCATCGGCGTGTTCGCTAACCACTTCGGCGGCTGGCGTGCGGCGCTGAAGATA TGTCTGGTGATGGGGATGATTGAAATCTTTGGCTGCGTCTGGGCGGTGAAACTCACCGGTATGAGCGCCTGGATGGGCAT GGCGGACTGGTCGATTCTGGCACCGCCGATGATGCAGGGCTTCTTCTCCATCGGTATCGCCTTTATGGCCGTCATCATTG TAATTGCACTGGCTTATATGTTCTTCGCTGGCCGCGCACTGCGCGCAGAAGAAGATGCAGAAAAACAACTGGCAGAACAG TCTGCTTAA
Upstream 100 bases:
>100_bases TTTCGTTGTGTGAATCCCACTCTATCCGTATGGAATTATTTGCGGGTCGCGTCACATTTAATCATAAATAATCTTGTTGT GATTGCTTTTGAAAATTAGA
Downstream 100 bases:
>100_bases TAAGGAGTTTTGATTATGACCGTACGTATTCTGGCTGTGTGTGGCAACGGACAAGGCAGTTCCATGATCATGAAGATGAA AGTGGACCAGTTTTTAACCC
Product: PTS system ascorbate-specific transporter subunit IIC
Products: NA
Alternate protein names: Ascorbate-specific PTS system EIIC component [H]
Number of amino acids: Translated: 482; Mature: 481
Protein sequence:
>482_residues MSAQHSGCAEYPVTSSSGDRLYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILT STFKPVVAKMSEVYGINGAISDTYASMMATIDRMGDAYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGL IAVTLFIFGYSMWTTIICTAILVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPFLGKKEESVEDLKLP GWLNIFHDNIVSTAIVMTIFFGAILLSFGIDTVQAMAGKVNWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQ RLIPGAVLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGILVACGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKI CLVMGMIEIFGCVWAVKLTGMSAWMGMADWSILAPPMMQGFFSIGIAFMAVIIVIALAYMFFAGRALRAEEDAEKQLAEQ SA
Sequences:
>Translated_482_residues MSAQHSGCAEYPVTSSSGDRLYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILT STFKPVVAKMSEVYGINGAISDTYASMMATIDRMGDAYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGL IAVTLFIFGYSMWTTIICTAILVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPFLGKKEESVEDLKLP GWLNIFHDNIVSTAIVMTIFFGAILLSFGIDTVQAMAGKVNWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQ RLIPGAVLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGILVACGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKI CLVMGMIEIFGCVWAVKLTGMSAWMGMADWSILAPPMMQGFFSIGIAFMAVIIVIALAYMFFAGRALRAEEDAEKQLAEQ SA >Mature_481_residues SAQHSGCAEYPVTSSSGDRLYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIKGTIKTIIGFMLLQAGSGILTS TFKPVVAKMSEVYGINGAISDTYASMMATIDRMGDAYSWVGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGLI AVTLFIFGYSMWTTIICTAILVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPFLGKKEESVEDLKLPG WLNIFHDNIVSTAIVMTIFFGAILLSFGIDTVQAMAGKVNWTVYILQTGFSFAVAIFIITQGVRMFVAELSEAFNGISQR LIPGAVLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGILVACGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKIC LVMGMIEIFGCVWAVKLTGMSAWMGMADWSILAPPMMQGFFSIGIAFMAVIIVIALAYMFFAGRALRAEEDAEKQLAEQS A
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active- transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i
COG id: COG3037
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ulaA family [H]
Homologues:
Organism=Escherichia coli, GI87082388, Length=464, Percent_Identity=99.3534482758621, Blast_Score=926, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004703 [H]
Pfam domain/function: PF03611 EIIC-GAT [H]
EC number: NA
Molecular weight: Translated: 52394; Mature: 52263
Theoretical pI: Translated: 7.67; Mature: 7.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 7.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQHSGCAEYPVTSSSGDRLYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIK CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH GTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGINGAISDTYASMMATIDRMGDAYSW HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHH VGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGLIAVTLFIFGYSMWTTIICTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPFLGKKEESVEDLKLP HHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCC GWLNIFHDNIVSTAIVMTIFFGAILLSFGIDTVQAMAGKVNWTVYILQTGFSFAVAIFII CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEEEECCHHHHHHHHHH TQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGI HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LVACGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGMIEIFGCVWAVKLTG HHHCCCCEEEECCHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MSAWMGMADWSILAPPMMQGFFSIGIAFMAVIIVIALAYMFFAGRALRAEEDAEKQLAEQ HHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHC SA CC >Mature Secondary Structure SAQHSGCAEYPVTSSSGDRLYNIFTVFFNQVMTNAPLLLGIVTCLGYILLRKSVSVIIK CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH GTIKTIIGFMLLQAGSGILTSTFKPVVAKMSEVYGINGAISDTYASMMATIDRMGDAYSW HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHH VGYAVLLALALNICYVLLRRITGIRTIMLTGHIMFQQAGLIAVTLFIFGYSMWTTIICTA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILVSLYWGITSNMMYKPTQEVTDGCGFSIGHQQQFASWIAYKVAPFLGKKEESVEDLKLP HHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHCCCC GWLNIFHDNIVSTAIVMTIFFGAILLSFGIDTVQAMAGKVNWTVYILQTGFSFAVAIFII CHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEEEECCHHHHHHHHHH TQGVRMFVAELSEAFNGISQRLIPGAVLAIDCAAIYSFAPNAVVWGFMWGTIGQLIAVGI HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH LVACGSSILIIPGFIPMFFSNATIGVFANHFGGWRAALKICLVMGMIEIFGCVWAVKLTG HHHCCCCEEEECCHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH MSAWMGMADWSILAPPMMQGFFSIGIAFMAVIIVIALAYMFFAGRALRAEEDAEKQLAEQ HHHHHCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHC SA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]