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The map label for this gene is rfaC [H]

Identifier: 161871019

GI number: 161871019

Start: 2146565

End: 2147464

Strand: Reverse

Name: rfaC [H]

Synonym: NMCC_2115

Alternate gene names: 161871019

Gene position: 2147464-2146565 (Counterclockwise)

Preceding gene: 161871020

Following gene: 161871018

Centisome position: 99.72

GC content: 46.56

Gene sequence:

>900_bases
TTGGCGCGACAATGTCCTGATGTAGAACTGCATTGGCTATGTGAGGCTGGATTTGCAGATATTGCGCGCCTGCATCCGTT
TGTAAAAAAAATCCATGTGATGAAATGGCGGCAATGGCGCAAACATCTCTTTCGGGCTGAAACTTGGCGGGAAATGGGTC
ATCTGAAACAGACTTTGCGGCAGGAAGTATTTGATTTCGTATTGGACAGTCAAGGTCTGATTAAAAGCGCGTGTTTCGCT
AAAATGGCAAAATCCCCGATTTGTGGTTTGGATAAAAACAGTGCGCGCGAGGGATGGGCTGCTTTGGCGTATGTAAAAAC
ATACGCTGTACCGAAGGGAAAAAATGCCGTTTGGCGCAACCGTGAACTGTTTGCCCAAGTATTTGGGTATGTAATGCCGG
AAACGCAGGTATTTGGCTTGACTGTTCCTGAAGCAGGCCGTCTGAAAAATTTAGCGCAGCCGTATTATGCGGCTTTGCAT
GCGACCAGTCGGGACAGTAAGTTATGGCCTGTGGAAAACTGGCGGTCATTGCTGCAAAAGTTGAATGAAGAACAGCAATG
CAATATTTACCTGCCTTGGGGAAATGAAGATGAAAAAACGCGTGCCAAACAAATTGCAGACGGACTGCCGTTTGCTATTG
TGTGCGACAAAATAAATTTATTGCAGGCAGCGTATCTGCTGAAATACGCGGTCGGAATTGTCGGCGTGGATACCGGTTTG
CTGCATTTGGCAAATGCCTTGGAAAAACCTGTGGTCGGCATTTATACCGATACCGATCCGATTAAAACAGGCGTTCAGGT
TTCGCCAATTGCAAAAAATTTGGGCAATATCGGGCAGATTCCGACCGCAGATTTGGTTTATCAAGCGCTGATGGATTGTG
TTGCAGCAGATAAAGGCTAA

Upstream 100 bases:

>100_bases
AATTGTTTCACGTGAAACCCCCTTCCTAAATATGAAAATTTTGCTTGTCCGCTTGTCTAGTATGGGCGATTTAATTCACA
CTTTGCCCGCAATCGAAGAT

Downstream 100 bases:

>100_bases
AGGGTCGTCTAAAACTGATATGGCGGCATGATATTTTCCAATTTATTAGATACAGGAATGTATATCCGCTAGTCTGAGTA
AATGCTTTAAAAATGGTATA

Product: lipopolysaccharide heptosyltransferase I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MARQCPDVELHWLCEAGFADIARLHPFVKKIHVMKWRQWRKHLFRAETWREMGHLKQTLRQEVFDFVLDSQGLIKSACFA
KMAKSPICGLDKNSAREGWAALAYVKTYAVPKGKNAVWRNRELFAQVFGYVMPETQVFGLTVPEAGRLKNLAQPYYAALH
ATSRDSKLWPVENWRSLLQKLNEEQQCNIYLPWGNEDEKTRAKQIADGLPFAIVCDKINLLQAAYLLKYAVGIVGVDTGL
LHLANALEKPVVGIYTDTDPIKTGVQVSPIAKNLGNIGQIPTADLVYQALMDCVAADKG

Sequences:

>Translated_299_residues
MARQCPDVELHWLCEAGFADIARLHPFVKKIHVMKWRQWRKHLFRAETWREMGHLKQTLRQEVFDFVLDSQGLIKSACFA
KMAKSPICGLDKNSAREGWAALAYVKTYAVPKGKNAVWRNRELFAQVFGYVMPETQVFGLTVPEAGRLKNLAQPYYAALH
ATSRDSKLWPVENWRSLLQKLNEEQQCNIYLPWGNEDEKTRAKQIADGLPFAIVCDKINLLQAAYLLKYAVGIVGVDTGL
LHLANALEKPVVGIYTDTDPIKTGVQVSPIAKNLGNIGQIPTADLVYQALMDCVAADKG
>Mature_298_residues
ARQCPDVELHWLCEAGFADIARLHPFVKKIHVMKWRQWRKHLFRAETWREMGHLKQTLRQEVFDFVLDSQGLIKSACFAK
MAKSPICGLDKNSAREGWAALAYVKTYAVPKGKNAVWRNRELFAQVFGYVMPETQVFGLTVPEAGRLKNLAQPYYAALHA
TSRDSKLWPVENWRSLLQKLNEEQQCNIYLPWGNEDEKTRAKQIADGLPFAIVCDKINLLQAAYLLKYAVGIVGVDTGLL
HLANALEKPVVGIYTDTDPIKTGVQVSPIAKNLGNIGQIPTADLVYQALMDCVAADKG

Specific function: Heptose transfer to the lipopolysaccharide core. It transfers the innnermost heptose to [4'-P](3-deoxy-D-manno- octulosonic acid)2-IVA [H]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790051, Length=258, Percent_Identity=38.3720930232558, Blast_Score=170, Evalue=9e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011908 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.4.1.-

Molecular weight: Translated: 33668; Mature: 33537

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARQCPDVELHWLCEAGFADIARLHPFVKKIHVMKWRQWRKHLFRAETWREMGHLKQTLR
CCCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QEVFDFVLDSQGLIKSACFAKMAKSPICGLDKNSAREGWAALAYVKTYAVPKGKNAVWRN
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHCC
RELFAQVFGYVMPETQVFGLTVPEAGRLKNLAQPYYAALHATSRDSKLWPVENWRSLLQK
HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
LNEEQQCNIYLPWGNEDEKTRAKQIADGLPFAIVCDKINLLQAAYLLKYAVGIVGVDTGL
CCCCCCCEEECCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
LHLANALEKPVVGIYTDTDPIKTGVQVSPIAKNLGNIGQIPTADLVYQALMDCVAADKG
HHHHHHHHCCEEEEEECCCHHHCCCEECHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
ARQCPDVELHWLCEAGFADIARLHPFVKKIHVMKWRQWRKHLFRAETWREMGHLKQTLR
CCCCCCCCEEHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QEVFDFVLDSQGLIKSACFAKMAKSPICGLDKNSAREGWAALAYVKTYAVPKGKNAVWRN
HHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHCC
RELFAQVFGYVMPETQVFGLTVPEAGRLKNLAQPYYAALHATSRDSKLWPVENWRSLLQK
HHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
LNEEQQCNIYLPWGNEDEKTRAKQIADGLPFAIVCDKINLLQAAYLLKYAVGIVGVDTGL
CCCCCCCEEECCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHH
LHLANALEKPVVGIYTDTDPIKTGVQVSPIAKNLGNIGQIPTADLVYQALMDCVAADKG
HHHHHHHHCCEEEEEECCCHHHCCCEECHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8478319; 8041620; 9278503; 1624462 [H]