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The map label for this gene is ubiD [H]

Identifier: 161870542

GI number: 161870542

Start: 1639113

End: 1640498

Strand: Reverse

Name: ubiD [H]

Synonym: NMCC_1607

Alternate gene names: 161870542

Gene position: 1640498-1639113 (Counterclockwise)

Preceding gene: 161870543

Following gene: 161870540

Centisome position: 76.18

GC content: 56.2

Gene sequence:

>1386_bases
ATGACCGAAATCGCCGACCGCGTGCTGCGCGCCGAAGGGTCGGCATTGTTGTTTGAGAATCCGATTAAGCCTGACGGTAC
GCGCTACGATTATCCCGTGTTGGCAAACCTGTTCGGCACGCCCGAACGTGTGGCAATGGGCATGGGTGCGGACAGCGTGT
CCAAGCTGCGCGAAATCGGGCAGACGCTGGCGTATTTGAAAGAACCCGAACCGCCCAAAGGCATCAAAGACGCGTTTTCC
AAACTGCCGCTCTTGAAAGACATTTGGAGCATGGTGCCGAACGTGGTGAAAAACGCGCCGTGTCAGGAAATCGTGTGGGA
AGGCGAAGACGTTGATTTGTATCAACTTCCGATTCAGCATTGCTGGCCGGAAGACGTTGCGCCGCTGGTAACATGGGGCT
TGACCGTCACGCGCGGGCCGCACAAAAAACGCCAAAATCTCGGCATTTACCGCCAACAACTCATCGGCAAAAACAAGCTG
ATTATGCGCTGGCTGTCGCATCGCGGCGGCGCGTTGGATTATCAGGAATTCCACAAACTCAATCCCGATACGCCGTATCC
CGTCGCCGTCGTACTCGGCTGCGACCCCGCCACCATTTTGGGCGCGGTAACGCCTGTTCCCGATACCTTGAGCGAATACC
AGTTTGCCGGACTGCTGCGCGGTTCGCGGACGGAGCTGGTGAAATGTATCGGCAACGATTTGCAAGTGCCTGCACGCGCC
GAAATTGTGTTGGAAGGCGTGATTCATCCGAACGAAACCGCGCTGGAAGGCCCATACGGCGACCACACCGGCTATTACAA
CGAGCAGGACCATTTCCCCATGTTTACGGTCGAACGCATCACCATGCGCGAAAACCCGATTTACCATTCGACCTACACAG
GCAAACCGCCCGATGAACCTGCCGTTTTGGGCGTGGCATTGAACGAAGTGTTCGTACCGCTCTTGCAAAAGCAGTTTCCC
GAAATCACCGATTTCTACCTGCCGCCCGAAGGCTGCTCCTACCGCATGGCGGTGGTGAGCATGAAAAAACAGTACGCCGG
ACACGCCAAGCGCGTGATGATGGGCTGCTGGTCGTTCCTGCGCCAGTTTATGTATACCAAATTCATCATCGTGGTGGATG
ACGATGTGAACGTGCGCGACTGGAAAGAAGTCATCTGGGCGGTCACCACGCGCATGGACCCCGTGCGCGACACTGTTTTG
GTAGAAAACACGCCCATCGATTATCTCGACTTCGCCAGCCCCGTCAGCGGACTCGGCGGCAAAATGGGTTTGGATGCGAC
CAACAAATGGCCGGGAGAAACCGACCGCGAATGGGGACGCGTCATCAAAAAAGACCCTGCGGTTACGGCTAAGATTGATG
GGATTTGGGAGGAATTGGGGTTGTAG

Upstream 100 bases:

>100_bases
GATAAATATGAAATACAAAGACCTGCGCGACTTCATCGCCATGCTCGAGCAGCAGGGCAAACTCAAACGCATCGCGCACC
CCGTTTCCCCGCATTTGGAA

Downstream 100 bases:

>100_bases
GTTTTACGGTCATGCCGTCTGAAGCGTGGGGGTGTTTCAGACGGCATTTGTGTACGCAGGATGTTTACGGTTCTTTAGGT
TTGAGCCACTGCCATTGTTC

Product: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase

Products: NA

Alternate protein names: Polyprenyl p-hydroxybenzoate decarboxylase [H]

Number of amino acids: Translated: 461; Mature: 460

Protein sequence:

>461_residues
MTEIADRVLRAEGSALLFENPIKPDGTRYDYPVLANLFGTPERVAMGMGADSVSKLREIGQTLAYLKEPEPPKGIKDAFS
KLPLLKDIWSMVPNVVKNAPCQEIVWEGEDVDLYQLPIQHCWPEDVAPLVTWGLTVTRGPHKKRQNLGIYRQQLIGKNKL
IMRWLSHRGGALDYQEFHKLNPDTPYPVAVVLGCDPATILGAVTPVPDTLSEYQFAGLLRGSRTELVKCIGNDLQVPARA
EIVLEGVIHPNETALEGPYGDHTGYYNEQDHFPMFTVERITMRENPIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFP
EITDFYLPPEGCSYRMAVVSMKKQYAGHAKRVMMGCWSFLRQFMYTKFIIVVDDDVNVRDWKEVIWAVTTRMDPVRDTVL
VENTPIDYLDFASPVSGLGGKMGLDATNKWPGETDREWGRVIKKDPAVTAKIDGIWEELGL

Sequences:

>Translated_461_residues
MTEIADRVLRAEGSALLFENPIKPDGTRYDYPVLANLFGTPERVAMGMGADSVSKLREIGQTLAYLKEPEPPKGIKDAFS
KLPLLKDIWSMVPNVVKNAPCQEIVWEGEDVDLYQLPIQHCWPEDVAPLVTWGLTVTRGPHKKRQNLGIYRQQLIGKNKL
IMRWLSHRGGALDYQEFHKLNPDTPYPVAVVLGCDPATILGAVTPVPDTLSEYQFAGLLRGSRTELVKCIGNDLQVPARA
EIVLEGVIHPNETALEGPYGDHTGYYNEQDHFPMFTVERITMRENPIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFP
EITDFYLPPEGCSYRMAVVSMKKQYAGHAKRVMMGCWSFLRQFMYTKFIIVVDDDVNVRDWKEVIWAVTTRMDPVRDTVL
VENTPIDYLDFASPVSGLGGKMGLDATNKWPGETDREWGRVIKKDPAVTAKIDGIWEELGL
>Mature_460_residues
TEIADRVLRAEGSALLFENPIKPDGTRYDYPVLANLFGTPERVAMGMGADSVSKLREIGQTLAYLKEPEPPKGIKDAFSK
LPLLKDIWSMVPNVVKNAPCQEIVWEGEDVDLYQLPIQHCWPEDVAPLVTWGLTVTRGPHKKRQNLGIYRQQLIGKNKLI
MRWLSHRGGALDYQEFHKLNPDTPYPVAVVLGCDPATILGAVTPVPDTLSEYQFAGLLRGSRTELVKCIGNDLQVPARAE
IVLEGVIHPNETALEGPYGDHTGYYNEQDHFPMFTVERITMRENPIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFPE
ITDFYLPPEGCSYRMAVVSMKKQYAGHAKRVMMGCWSFLRQFMYTKFIIVVDDDVNVRDWKEVIWAVTTRMDPVRDTVLV
ENTPIDYLDFASPVSGLGGKMGLDATNKWPGETDREWGRVIKKDPAVTAKIDGIWEELGL

Specific function: Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol [H]

COG id: COG0043

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiD family [H]

Homologues:

Organism=Escherichia coli, GI1790277, Length=461, Percent_Identity=76.1388286334056, Blast_Score=731, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6320748, Length=379, Percent_Identity=29.287598944591, Blast_Score=127, Evalue=3e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002830
- InterPro:   IPR009002 [H]

Pfam domain/function: PF01977 UbiD [H]

EC number: 4.1.1.-

Molecular weight: Translated: 51887; Mature: 51756

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTEIADRVLRAEGSALLFENPIKPDGTRYDYPVLANLFGTPERVAMGMGADSVSKLREIG
CCHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHCCCHHHHHHCCCHHHHHHHHHHH
QTLAYLKEPEPPKGIKDAFSKLPLLKDIWSMVPNVVKNAPCQEIVWEGEDVDLYQLPIQH
HHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEECCHHH
CWPEDVAPLVTWGLTVTRGPHKKRQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEFHKL
CCCCHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHCC
NPDTPYPVAVVLGCDPATILGAVTPVPDTLSEYQFAGLLRGSRTELVKCIGNDLQVPARA
CCCCCCCEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHH
EIVLEGVIHPNETALEGPYGDHTGYYNEQDHFPMFTVERITMRENPIYHSTYTGKPPDEP
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCEECCCCCCCCCCC
AVLGVALNEVFVPLLQKQFPEITDFYLPPEGCSYRMAVVSMKKQYAGHAKRVMMGCWSFL
CEEHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RQFMYTKFIIVVDDDVNVRDWKEVIWAVTTRMDPVRDTVLVENTPIDYLDFASPVSGLGG
HHHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHCCCHHHCCC
KMGLDATNKWPGETDREWGRVIKKDPAVTAKIDGIWEELGL
CCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHCC
>Mature Secondary Structure 
TEIADRVLRAEGSALLFENPIKPDGTRYDYPVLANLFGTPERVAMGMGADSVSKLREIG
CHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHCCCHHHHHHCCCHHHHHHHHHHH
QTLAYLKEPEPPKGIKDAFSKLPLLKDIWSMVPNVVKNAPCQEIVWEGEDVDLYQLPIQH
HHHHHHCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHCCCCCCEEEECCHHH
CWPEDVAPLVTWGLTVTRGPHKKRQNLGIYRQQLIGKNKLIMRWLSHRGGALDYQEFHKL
CCCCHHHHHHHHCEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHCC
NPDTPYPVAVVLGCDPATILGAVTPVPDTLSEYQFAGLLRGSRTELVKCIGNDLQVPARA
CCCCCCCEEEEECCCHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHH
EIVLEGVIHPNETALEGPYGDHTGYYNEQDHFPMFTVERITMRENPIYHSTYTGKPPDEP
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHCCCCCEECCCCCCCCCCC
AVLGVALNEVFVPLLQKQFPEITDFYLPPEGCSYRMAVVSMKKQYAGHAKRVMMGCWSFL
CEEHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
RQFMYTKFIIVVDDDVNVRDWKEVIWAVTTRMDPVRDTVLVENTPIDYLDFASPVSGLGG
HHHHHHEEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHCCCHHHCCC
KMGLDATNKWPGETDREWGRVIKKDPAVTAKIDGIWEELGL
CCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA