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The map label for this gene is dedA [C]

Identifier: 161870537

GI number: 161870537

Start: 1632431

End: 1633114

Strand: Reverse

Name: dedA [C]

Synonym: NMCC_1602

Alternate gene names: 161870537

Gene position: 1633114-1632431 (Counterclockwise)

Preceding gene: 161870538

Following gene: 161870536

Centisome position: 75.84

GC content: 54.82

Gene sequence:

>684_bases
ATGTTTGCCCTTTTGGAAGCCTTTTTTGTCGAATACGGCTACGCGGCCGTGTTTTTCGTTTTGGTCATCTGCGGTTTCGG
CGTGCCGATTCCCGAGGATTTGACCTTGGTAACAGGCGGCGTGATTTCGGGTATGGGTTATACCAATCCGCATATTATGT
TTGCAGTCGGTATGCTCGGCGTGTTGGCGGGCGACGGCATCATGTTCGCCGCCGGACGAATTTGGGGGCAGAAAATCCTC
AAGTTCAAACCGATTGCGCGCATCATGACGCCGAAACGTTACGCACAGGTTCAGGAAAAATTCGACAAATACGGCAACTG
GGTTCTGTTTGTCGCCCGCTTCCTGCCGGGTTTGCGGACTGCCGTTTTCGTTACCGCCGGCATCAGCCGCAAAGTATCGT
ATCTGCGCTTTCTGATTATGGACGGGCTTGCCGCGCTGATTTCCGTGCCCGTTTGGATTTACTTGGGCGAGTACGGCGCG
CACAACATCGATTGGCTGATGGCGAAAATGCACAGCCTGCAATCCGGCATCTTCATCGCATTGGGCGTGCTGGCGGCGGC
GCTGGCGTGGTTCTGGTGGCGCAAACGCCGACATTATCAGCTTTACCGCGCACAATTGAGCGAAAAACGCGCCAAACGCA
AGGCGGAAAAGGCAGCGAAAAAAGCGGCACAGAAGCAGCAGTAA

Upstream 100 bases:

>100_bases
TGCCGCTTTCAGACGGCATAATCTTTGATAGAATGCCGTTTCGCGCAGAAAATGTTTCGGCTTGTTCTGACTTTTTATCT
CCGACAATGGAATATCCGCT

Downstream 100 bases:

>100_bases
ATCAGATTTTCGACCGTCCGGACGCATTTCGCGTTTCAGGCGGTCTTTGCATTTTCAGGATGAGCCATGAAACAGAAAAT
TTTTGTCCTTTATACCGGCG

Product: putative DedA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MFALLEAFFVEYGYAAVFFVLVICGFGVPIPEDLTLVTGGVISGMGYTNPHIMFAVGMLGVLAGDGIMFAAGRIWGQKIL
KFKPIARIMTPKRYAQVQEKFDKYGNWVLFVARFLPGLRTAVFVTAGISRKVSYLRFLIMDGLAALISVPVWIYLGEYGA
HNIDWLMAKMHSLQSGIFIALGVLAAALAWFWWRKRRHYQLYRAQLSEKRAKRKAEKAAKKAAQKQQ

Sequences:

>Translated_227_residues
MFALLEAFFVEYGYAAVFFVLVICGFGVPIPEDLTLVTGGVISGMGYTNPHIMFAVGMLGVLAGDGIMFAAGRIWGQKIL
KFKPIARIMTPKRYAQVQEKFDKYGNWVLFVARFLPGLRTAVFVTAGISRKVSYLRFLIMDGLAALISVPVWIYLGEYGA
HNIDWLMAKMHSLQSGIFIALGVLAAALAWFWWRKRRHYQLYRAQLSEKRAKRKAEKAAKKAAQKQQ
>Mature_227_residues
MFALLEAFFVEYGYAAVFFVLVICGFGVPIPEDLTLVTGGVISGMGYTNPHIMFAVGMLGVLAGDGIMFAAGRIWGQKIL
KFKPIARIMTPKRYAQVQEKFDKYGNWVLFVARFLPGLRTAVFVTAGISRKVSYLRFLIMDGLAALISVPVWIYLGEYGA
HNIDWLMAKMHSLQSGIFIALGVLAAALAWFWWRKRRHYQLYRAQLSEKRAKRKAEKAAKKAAQKQQ

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 25550; Mature: 25550

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFALLEAFFVEYGYAAVFFVLVICGFGVPIPEDLTLVTGGVISGMGYTNPHIMFAVGMLG
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
VLAGDGIMFAAGRIWGQKILKFKPIARIMTPKRYAQVQEKFDKYGNWVLFVARFLPGLRT
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHCHHHH
AVFVTAGISRKVSYLRFLIMDGLAALISVPVWIYLGEYGAHNIDWLMAKMHSLQSGIFIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHH
LGVLAAALAWFWWRKRRHYQLYRAQLSEKRAKRKAEKAAKKAAQKQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFALLEAFFVEYGYAAVFFVLVICGFGVPIPEDLTLVTGGVISGMGYTNPHIMFAVGMLG
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
VLAGDGIMFAAGRIWGQKILKFKPIARIMTPKRYAQVQEKFDKYGNWVLFVARFLPGLRT
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCHHHHHHHHHCHHHH
AVFVTAGISRKVSYLRFLIMDGLAALISVPVWIYLGEYGAHNIDWLMAKMHSLQSGIFIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHH
LGVLAAALAWFWWRKRRHYQLYRAQLSEKRAKRKAEKAAKKAAQKQQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]