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The map label for this gene is ymbA [C]

Identifier: 161870519

GI number: 161870519

Start: 1613228

End: 1613746

Strand: Direct

Name: ymbA [C]

Synonym: NMCC_1583

Alternate gene names: 161870519

Gene position: 1613228-1613746 (Clockwise)

Preceding gene: 161870518

Following gene: 161870520

Centisome position: 74.91

GC content: 58.38

Gene sequence:

>519_bases
ATGCGCCTTTTCCCGATTGCCGCCGCCCTGTCGCTTGCCGCCTGCGGTACTGTGCAAAGCACACAATATTTCGTGTTGCC
CGACAGCCGCTACATCCGTCCTGCAACGCAAGGCGGCGAAACTGCCGTCGAAGTCCGTCTTGCCGAACCGCTCAAACGCG
GCGGACTGGTCTATCAAACCGACCCCTACCGCCTCAACACCGCACAAAACCACGTTTGGGCGGACACCTTGGACGATATG
CTCGAAGCGGCGTTGAGCAATGCATTCAACCGTTTGGACAGCACACGCATCTTTGTTCCTGCCTCACGCAGCGGCAGTAC
CGAAAAATGGACGGTCTATATTGACGCATTCCAAGGCAGCTACACGGGCAAAACCCTCATCAGCGGCTACGCCGTCCTAC
CCGACGGTACGAACAGACCCTTCCATATCGAAACCGAACAGCAGGGTGACGGCTACGCCGCGATGACCGCCGCACTCGAA
CAGGGACTGAAACAGGCGGCGCAACAGATGGTCGAGTAA

Upstream 100 bases:

>100_bases
TAAAAGACGTTCAACCCGTCATTAACACTTTGAAAGAAAAACCCAACGCGCTGATTTTCAACAGCAGCAGCAAAGACCCT
ATCCCGAAAGGAAGCCGATA

Downstream 100 bases:

>100_bases
AACGTGAACTATTGCGAATTTGCCGCCTCACTTCCCGAAAACACCGATAACCCGAACAAACATTACCACGACACGCAATA
CGGTTTTCCGATTGAGGACG

Product: lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MRLFPIAAALSLAACGTVQSTQYFVLPDSRYIRPATQGGETAVEVRLAEPLKRGGLVYQTDPYRLNTAQNHVWADTLDDM
LEAALSNAFNRLDSTRIFVPASRSGSTEKWTVYIDAFQGSYTGKTLISGYAVLPDGTNRPFHIETEQQGDGYAAMTAALE
QGLKQAAQQMVE

Sequences:

>Translated_172_residues
MRLFPIAAALSLAACGTVQSTQYFVLPDSRYIRPATQGGETAVEVRLAEPLKRGGLVYQTDPYRLNTAQNHVWADTLDDM
LEAALSNAFNRLDSTRIFVPASRSGSTEKWTVYIDAFQGSYTGKTLISGYAVLPDGTNRPFHIETEQQGDGYAAMTAALE
QGLKQAAQQMVE
>Mature_172_residues
MRLFPIAAALSLAACGTVQSTQYFVLPDSRYIRPATQGGETAVEVRLAEPLKRGGLVYQTDPYRLNTAQNHVWADTLDDM
LEAALSNAFNRLDSTRIFVPASRSGSTEKWTVYIDAFQGSYTGKTLISGYAVLPDGTNRPFHIETEQQGDGYAAMTAALE
QGLKQAAQQMVE

Specific function: Unknown

COG id: COG3009

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18812; Mature: 18812

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFPIAAALSLAACGTVQSTQYFVLPDSRYIRPATQGGETAVEVRLAEPLKRGGLVYQT
CCCCHHHHHHHHHHCCCCCCCEEEEECCCCEECCCCCCCCEEEEEEEHHHHHHCCEEEEC
DPYRLNTAQNHVWADTLDDMLEAALSNAFNRLDSTRIFVPASRSGSTEKWTVYIDAFQGS
CCEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEEEECCC
YTGKTLISGYAVLPDGTNRPFHIETEQQGDGYAAMTAALEQGLKQAAQQMVE
CCCCHHHCCEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLFPIAAALSLAACGTVQSTQYFVLPDSRYIRPATQGGETAVEVRLAEPLKRGGLVYQT
CCCCHHHHHHHHHHCCCCCCCEEEEECCCCEECCCCCCCCEEEEEEEHHHHHHCCEEEEC
DPYRLNTAQNHVWADTLDDMLEAALSNAFNRLDSTRIFVPASRSGSTEKWTVYIDAFQGS
CCEEECCCCCCEEHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCEEEEEEEEECCC
YTGKTLISGYAVLPDGTNRPFHIETEQQGDGYAAMTAALEQGLKQAAQQMVE
CCCCHHHCCEEECCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA