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The map label for this gene is pqiA [H]

Identifier: 161870517

GI number: 161870517

Start: 1610201

End: 1611574

Strand: Direct

Name: pqiA [H]

Synonym: NMCC_1581

Alternate gene names: 161870517

Gene position: 1610201-1611574 (Clockwise)

Preceding gene: 161870513

Following gene: 161870518

Centisome position: 74.77

GC content: 54.29

Gene sequence:

>1374_bases
TTGCATCCTGATTGGGTGTATCGCCTTTTTTCCTTTATAATGCCGCCACTTATATTTGCCACTTTCCCGATGAAGCCGTT
TGCCGAAAATATCCCCCACAGCCTTCGCGGCAACTGCTGCGACGAAGCCCTGCCGCCGCATACGGTAGATTGTCCGGAAT
GCGGCTGCCGCGCGGATGTACCCCGGTTGGACAGTGGAGAAGCGGCGTTCTGTCCCCGTTGCGGACACAAACTCTTCAGG
GTGGGCAGGCATCCTTTTTCCGCCCCGCCCGCTTATGCGGCGGCTTCGCTGATTTTGATGGCGTTTGCTTACGGTATGAC
GTATATCGAGGTCGGGATACCGGGTGCGGCATCCGTCCTTTCGCTGCCTGAAATGATGCGCCTGATGGTGTTTCAGGATT
ATGGTTTTTTGGCCGAAGTGATGTTTGTGCTGACCTTCGGCGCGCCGGTTCTGTTTCTGCTGCTGTGCCTGTATGTCTAT
GCCGCGCTGATACGGAAACAGGCGTATCCTGCGCTGCGTTTGGCAACGCGCGTAATGGTGCGCTTGAGGCAGGCGATGAT
GGTGGATGTGTTTTTTGTTTCCACTTTGGTGGCGTATATCAAGCTCTCGTCTGTGGCAGAGGTTCGCTTCGGATCGGCGT
TTTATCTGATGTTCGCGCTGTCGGTTATGCTGATTCGGACTTCGGTATCGGTTCCCCAGCATTGGGTGTATTTTCAAATC
GGGCGGCTGACGGGGGATAATGCGGTTCAGACGGCATCGGAAGGTAAAACCTGTTGCAGCCGCTGCCTGTATTTCCGCGA
CAGTGCCGAATCCCCCTGCGGCGTGTGCGGCGCGGAACTGTACCGCCGACGGCCGAAAAGTCTGAGTATTTCGTCGGCGT
TTCTGACGGCGGCGGTTATTTTGTATTTCCCTGCCAATATCCTGCCGATTATGATTTCGTCCAATCCTGCCGCCACAGAG
GTCAATACCATCCTTAACGGCATCGCTTATATGTGGGACGAGGGCGACAGGCTGATTGCGGCGGTTATTTTCAGCGCGAG
TATTTTGGTGCCGGTACTGAAGATTGCGGCAATGTCGGTTTTGATTACGTCCGCCCGCTTCGCTTTGCCAACGGGCGCAA
AGAAATTGTCGCACCTCTACCGCATCACCGAAGCGGTCGGCCGCTGGTCGATGATTGATATTTTTGTGATTATTATTTTG
ATGTGTTCGTTCCACACTTATGCCGCGCGTGTCATTCCGGGCAGTGCGGCAGTCTATTTCTGCCTGGTCGTGATTCTGAC
GATGCTGTCCGCCTATTATTTCGACCCGCGCCTGCTTTGGGACAAACGCGCTTCAGACGGCATTGCTTTCAATGAAACGG
AAAAATATGACTGA

Upstream 100 bases:

>100_bases
CGGGATTTTATCAAATGGGTTCGGCAGTCGGCGGACAACCGCTCAAAAAATATTTTTGCCGGACACCAAGGGTTTGTTCA
TACTGCCGAACCTGCCGGTT

Downstream 100 bases:

>100_bases
CAACAGCCCTCCTCCAAACGGACACGCTCAAGCACGCGTCCGCAAAAACAACACCTTCCTCTCCGCCGTCTGGCTGGTTC
CGCTGATCGCGCTGATTGCC

Product: PqiA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MHPDWVYRLFSFIMPPLIFATFPMKPFAENIPHSLRGNCCDEALPPHTVDCPECGCRADVPRLDSGEAAFCPRCGHKLFR
VGRHPFSAPPAYAAASLILMAFAYGMTYIEVGIPGAASVLSLPEMMRLMVFQDYGFLAEVMFVLTFGAPVLFLLLCLYVY
AALIRKQAYPALRLATRVMVRLRQAMMVDVFFVSTLVAYIKLSSVAEVRFGSAFYLMFALSVMLIRTSVSVPQHWVYFQI
GRLTGDNAVQTASEGKTCCSRCLYFRDSAESPCGVCGAELYRRRPKSLSISSAFLTAAVILYFPANILPIMISSNPAATE
VNTILNGIAYMWDEGDRLIAAVIFSASILVPVLKIAAMSVLITSARFALPTGAKKLSHLYRITEAVGRWSMIDIFVIIIL
MCSFHTYAARVIPGSAAVYFCLVVILTMLSAYYFDPRLLWDKRASDGIAFNETEKYD

Sequences:

>Translated_457_residues
MHPDWVYRLFSFIMPPLIFATFPMKPFAENIPHSLRGNCCDEALPPHTVDCPECGCRADVPRLDSGEAAFCPRCGHKLFR
VGRHPFSAPPAYAAASLILMAFAYGMTYIEVGIPGAASVLSLPEMMRLMVFQDYGFLAEVMFVLTFGAPVLFLLLCLYVY
AALIRKQAYPALRLATRVMVRLRQAMMVDVFFVSTLVAYIKLSSVAEVRFGSAFYLMFALSVMLIRTSVSVPQHWVYFQI
GRLTGDNAVQTASEGKTCCSRCLYFRDSAESPCGVCGAELYRRRPKSLSISSAFLTAAVILYFPANILPIMISSNPAATE
VNTILNGIAYMWDEGDRLIAAVIFSASILVPVLKIAAMSVLITSARFALPTGAKKLSHLYRITEAVGRWSMIDIFVIIIL
MCSFHTYAARVIPGSAAVYFCLVVILTMLSAYYFDPRLLWDKRASDGIAFNETEKYD
>Mature_457_residues
MHPDWVYRLFSFIMPPLIFATFPMKPFAENIPHSLRGNCCDEALPPHTVDCPECGCRADVPRLDSGEAAFCPRCGHKLFR
VGRHPFSAPPAYAAASLILMAFAYGMTYIEVGIPGAASVLSLPEMMRLMVFQDYGFLAEVMFVLTFGAPVLFLLLCLYVY
AALIRKQAYPALRLATRVMVRLRQAMMVDVFFVSTLVAYIKLSSVAEVRFGSAFYLMFALSVMLIRTSVSVPQHWVYFQI
GRLTGDNAVQTASEGKTCCSRCLYFRDSAESPCGVCGAELYRRRPKSLSISSAFLTAAVILYFPANILPIMISSNPAATE
VNTILNGIAYMWDEGDRLIAAVIFSASILVPVLKIAAMSVLITSARFALPTGAKKLSHLYRITEAVGRWSMIDIFVIIIL
MCSFHTYAARVIPGSAAVYFCLVVILTMLSAYYFDPRLLWDKRASDGIAFNETEKYD

Specific function: Unknown

COG id: COG2995

COG function: function code S; Uncharacterized paraquat-inducible protein A

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the pqiA family [H]

Homologues:

Organism=Escherichia coli, GI1787183, Length=413, Percent_Identity=32.2033898305085, Blast_Score=197, Evalue=1e-51,
Organism=Escherichia coli, GI1788137, Length=406, Percent_Identity=29.3103448275862, Blast_Score=159, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005219
- InterPro:   IPR007498 [H]

Pfam domain/function: PF04403 PqiA [H]

EC number: NA

Molecular weight: Translated: 50734; Mature: 50734

Theoretical pI: Translated: 8.36; Mature: 8.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHCCCHHHCCCCCCCCCEECCCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHCCCHHHCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]