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The map label for this gene is mtrA [C]

Identifier: 161870446

GI number: 161870446

Start: 1522776

End: 1523753

Strand: Direct

Name: mtrA [C]

Synonym: NMCC_1501

Alternate gene names: 161870446

Gene position: 1522776-1523753 (Clockwise)

Preceding gene: 161870441

Following gene: 161870447

Centisome position: 70.71

GC content: 51.02

Gene sequence:

>978_bases
ATGTGCGTATTATTGCAATTATTCAGTTGTGTTTCTCGTTTAATCATCTCATTTTATGGTTCAAAAAGATTTATGGACAT
TCTAGACAAACTGGTCGATTTCGCCCAATTGACGGGCAGTGTGGATGTGCAGTGCCTTTTGGGCGGACAATGGTCGGTAC
GGCATGAAACCTTGCAACGCGAAGGACTGGTACACATTGTTACATCGGGCAACGGCTATCTCTGCATCGACGGCGAAACT
TCCCCGCGTCCGGTCAGTACAGGGGATATTGTATTTTTCCCGCGCGGCTTGGGTCATGTGTTGAGCCACGACGGAAAATG
CGGAGAAAGTTTACAACCGGATATGCGGCAGCACGGTGCGTTTACGGTCAAACAGTGCGGCAACGGACAGGATATGAGCC
TGTTTTGCGCCCGTTTCCGCTACGACACCCACGCCGATTTGATGAACGGGCTGCCTGAAACCGTTTTTCTGAACATTGCC
CATCCGAGTTTACAGTATGTGGTTTCAATGCTGCAACTGGAAAGCGAAAAACCTTTGACGGGGACGGTTTCCGTGGTCAA
CGCATTGTCGTCCGTCCTGCTGGTGCTTATCCTGCGCGCCTATCTCGAACAGGATAAGGATGTCGAACTCTCGGGCGTAT
TGAAAGGTTGGCAGGACAAACGTTTGGGACATTTAATCCAAAAGGTGATAGACAAACCGGAAGACGAATGGAATGTCGAC
AAAATGGTGGCGGCTGCCAATATGTCGCGCGCGCAACTGATGCGCCGTTTCAAAAGCCGGGTCGGACTCAGCCCGCACGC
CTTTGTGAACCATATCCGCCTGCAAAAAGGCGCGTTGCTGCTGAAAAAAAACCCGGATTCGGTTTTGTCGGTCGCACTGT
CGGTAGGCTTTCAGTCGGAAACGCACTTCGGCAAGGCGTTCAAACGGCAATATCACGTTTCGCCGGGTCAATACCGGAAA
GAAGGCGGGCAAAAATAA

Upstream 100 bases:

>100_bases
GATTTTTTAACCAATGCGGTATGTTCTTTCCAATCTTTAAACATTTTCTTTTCCTTTCTCTTGCGTTTAACCCTGATACG
CGCTTGCGTATCTGTTTTCG

Downstream 100 bases:

>100_bases
ATCGGGGCTTCAAACGCAAATGCCGTCTGAAAAGGCTTTCATACAGCATTTGCGTACCGCGTCATTTCAAGGGCTGCATC
TTCATCACTTCCATCAAAAA

Product: AraC family transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MCVLLQLFSCVSRLIISFYGSKRFMDILDKLVDFAQLTGSVDVQCLLGGQWSVRHETLQREGLVHIVTSGNGYLCIDGET
SPRPVSTGDIVFFPRGLGHVLSHDGKCGESLQPDMRQHGAFTVKQCGNGQDMSLFCARFRYDTHADLMNGLPETVFLNIA
HPSLQYVVSMLQLESEKPLTGTVSVVNALSSVLLVLILRAYLEQDKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNVD
KMVAAANMSRAQLMRRFKSRVGLSPHAFVNHIRLQKGALLLKKNPDSVLSVALSVGFQSETHFGKAFKRQYHVSPGQYRK
EGGQK

Sequences:

>Translated_325_residues
MCVLLQLFSCVSRLIISFYGSKRFMDILDKLVDFAQLTGSVDVQCLLGGQWSVRHETLQREGLVHIVTSGNGYLCIDGET
SPRPVSTGDIVFFPRGLGHVLSHDGKCGESLQPDMRQHGAFTVKQCGNGQDMSLFCARFRYDTHADLMNGLPETVFLNIA
HPSLQYVVSMLQLESEKPLTGTVSVVNALSSVLLVLILRAYLEQDKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNVD
KMVAAANMSRAQLMRRFKSRVGLSPHAFVNHIRLQKGALLLKKNPDSVLSVALSVGFQSETHFGKAFKRQYHVSPGQYRK
EGGQK
>Mature_325_residues
MCVLLQLFSCVSRLIISFYGSKRFMDILDKLVDFAQLTGSVDVQCLLGGQWSVRHETLQREGLVHIVTSGNGYLCIDGET
SPRPVSTGDIVFFPRGLGHVLSHDGKCGESLQPDMRQHGAFTVKQCGNGQDMSLFCARFRYDTHADLMNGLPETVFLNIA
HPSLQYVVSMLQLESEKPLTGTVSVVNALSSVLLVLILRAYLEQDKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNVD
KMVAAANMSRAQLMRRFKSRVGLSPHAFVNHIRLQKGALLLKKNPDSVLSVALSVGFQSETHFGKAFKRQYHVSPGQYRK
EGGQK

Specific function: Unknown

COG id: COG2207

COG function: function code K; AraC-type DNA-binding domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1786496, Length=305, Percent_Identity=27.2131147540984, Blast_Score=119, Evalue=3e-28,
Organism=Escherichia coli, GI1790339, Length=100, Percent_Identity=33, Blast_Score=62, Evalue=5e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR003313
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF02311 AraC_binding; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 36214; Mature: 36214

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCVLLQLFSCVSRLIISFYGSKRFMDILDKLVDFAQLTGSVDVQCLLGGQWSVRHETLQR
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH
EGLVHIVTSGNGYLCIDGETSPRPVSTGDIVFFPRGLGHVLSHDGKCGESLQPDMRQHGA
CCEEEEEECCCEEEEECCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCHHHHHCCC
FTVKQCGNGQDMSLFCARFRYDTHADLMNGLPETVFLNIAHPSLQYVVSMLQLESEKPLT
EEEEECCCCCCHHHHHHHHCCCCHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCC
GTVSVVNALSSVLLVLILRAYLEQDKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNVD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHH
KMVAAANMSRAQLMRRFKSRVGLSPHAFVNHIRLQKGALLLKKNPDSVLSVALSVGFQSE
HHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCC
THFGKAFKRQYHVSPGQYRKEGGQK
HHHHHHHHHHHCCCCCHHHHCCCCC
>Mature Secondary Structure
MCVLLQLFSCVSRLIISFYGSKRFMDILDKLVDFAQLTGSVDVQCLLGGQWSVRHETLQR
CHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHH
EGLVHIVTSGNGYLCIDGETSPRPVSTGDIVFFPRGLGHVLSHDGKCGESLQPDMRQHGA
CCEEEEEECCCEEEEECCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCCCCCHHHHHCCC
FTVKQCGNGQDMSLFCARFRYDTHADLMNGLPETVFLNIAHPSLQYVVSMLQLESEKPLT
EEEEECCCCCCHHHHHHHHCCCCHHHHHCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCC
GTVSVVNALSSVLLVLILRAYLEQDKDVELSGVLKGWQDKRLGHLIQKVIDKPEDEWNVD
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCHH
KMVAAANMSRAQLMRRFKSRVGLSPHAFVNHIRLQKGALLLKKNPDSVLSVALSVGFQSE
HHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHCCCCC
THFGKAFKRQYHVSPGQYRKEGGQK
HHHHHHHHHHHCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]