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The map label for this gene is yoaB [C]

Identifier: 161870130

GI number: 161870130

Start: 1160464

End: 1160928

Strand: Direct

Name: yoaB [C]

Synonym: NMCC_1169

Alternate gene names: 161870130

Gene position: 1160464-1160928 (Clockwise)

Preceding gene: 161870127

Following gene: 161870132

Centisome position: 53.89

GC content: 55.48

Gene sequence:

>465_bases
GTGTTATCGGATAAGTGTGTTTACTCATTTTTCGTCATGCAAAACATGGAAATCGGTCAAGCGCAATGTTACCATATATC
CCCTTTATCGAAGGAAACCGATATGGATATCCGATATTTCGGCACAACGCCCCGCTATTCCGAAGCCGTCGGCGCAAACG
GCTTGATTTTCCTCTCCGGCATGGTTCCCGAAAACGGTGAAACGGCTGCCGAACAGACTGCCGACGTGCTTGCCCAAATC
GACCGCTGGCTGGCGGAATGCGGCTCGGACAAAGCGCACGTTTTGGATGCGGTCATCTATCTGCGCGATATGGGCGACTA
TGCGGAAATGAACGGCGTGTGGGACGCTTGGGTTGCCGCCGGCAGAACGCCCGCCCGCGCCTGCGTGGAAGCTCGGCTCG
CCCGTCCGGAGTGGCGCGTCGAAATCAAAATAACCGCCATGAAGAAAGATGCGGCAACCGCATAA

Upstream 100 bases:

>100_bases
CCGAATAGTCGGGCAAACTGCGCCGTGCCGCCGTGTTCCTCATAGGCATAGGTAAAAGGTTCAAATTCGATGCCGTTTTC
ACGCAAAACGCGCACGGCAG

Downstream 100 bases:

>100_bases
ACAGATTTCCTTTATATTTCAGAGTACGCAAATGATGAAAACCTTACTGCCCTTTTTCGGCGTGGTGCGCGTCAGCGGCG
AAGACCGCCAAACCTTCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MLSDKCVYSFFVMQNMEIGQAQCYHISPLSKETDMDIRYFGTTPRYSEAVGANGLIFLSGMVPENGETAAEQTADVLAQI
DRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVWDAWVAAGRTPARACVEARLARPEWRVEIKITAMKKDAATA

Sequences:

>Translated_154_residues
MLSDKCVYSFFVMQNMEIGQAQCYHISPLSKETDMDIRYFGTTPRYSEAVGANGLIFLSGMVPENGETAAEQTADVLAQI
DRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVWDAWVAAGRTPARACVEARLARPEWRVEIKITAMKKDAATA
>Mature_154_residues
MLSDKCVYSFFVMQNMEIGQAQCYHISPLSKETDMDIRYFGTTPRYSEAVGANGLIFLSGMVPENGETAAEQTADVLAQI
DRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVWDAWVAAGRTPARACVEARLARPEWRVEIKITAMKKDAATA

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87081979, Length=113, Percent_Identity=47.787610619469, Blast_Score=100, Evalue=5e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 17078; Mature: 17078

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSDKCVYSFFVMQNMEIGQAQCYHISPLSKETDMDIRYFGTTPRYSEAVGANGLIFLSG
CCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCCCCHHHHCCCCCEEEEEC
MVPENGETAAEQTADVLAQIDRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVWDAWVAA
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCCHHHHHHC
GRTPARACVEARLARPEWRVEIKITAMKKDAATA
CCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCC
>Mature Secondary Structure
MLSDKCVYSFFVMQNMEIGQAQCYHISPLSKETDMDIRYFGTTPRYSEAVGANGLIFLSG
CCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCCEEEECCCCCHHHHCCCCCEEEEEC
MVPENGETAAEQTADVLAQIDRWLAECGSDKAHVLDAVIYLRDMGDYAEMNGVWDAWVAA
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHCCCHHHHHHC
GRTPARACVEARLARPEWRVEIKITAMKKDAATA
CCCHHHHHHHHHHCCCCEEEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA