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The map label for this gene is psd

Identifier: 161869876

GI number: 161869876

Start: 912559

End: 913356

Strand: Direct

Name: psd

Synonym: NMCC_0907

Alternate gene names: 161869876

Gene position: 912559-913356 (Clockwise)

Preceding gene: 161869872

Following gene: 229597121

Centisome position: 42.38

GC content: 53.01

Gene sequence:

>798_bases
ATGAACCGTCTTTACCCCCACCCGATTATCGCCCGTGAGGGCTGGCCGATTATTGGCGGCGGTTTGGCTTTGAGCCTGCT
GGTGTCGATGTGTTGCGGCTGGTGGTCTTTGCCGTTTTGGGTGTTTACCGTATTTGCCCTGCAGTTTTTCCGCGACCCTG
CGCGTGAGATTCCGCAAAATCCTGAAGCAGTGTTGAGTCCGGTTGACGGCCGTATCGTGGTGGTCGAGCGCGCACGCGAT
CCGTATCGTGATGTCGATGCTTTGAAAATCAGTATTTTTATGAACGTGTTCAACGTGCATTCGCAAAAATCGCCTGCCGA
TTGTACGGTAACGAAAGTGGTCTATAACAAAGGCAAATTCGTGAATGCGGATTTGGACAAAGCCAGCACGGAAAACGAAC
GTAATGCGGTGTTGGCGACTACGGCTTCCGGTCGTGAAATTACTTTTGTTCAAGTGGCCGGTTTGGTGGCGCGCCGTATT
TTGTGCTACACCCAAGCAGGTGCGAAACTGTCTCGCGGCGAACGCTATGGCTTTATCCGTTTTGGCTCGCGCGTGGATAT
GTATCTGCCTGTCGATGCGCAGGCGCAAGTGGCGATTGGCGATAAAGTAAACGGTGTCAGCACTGTATTGGCGCGTTTGC
CGCTGACTGCGCCGCAAATCGAATCCGAGCCTGAATCTGAGCCTGCTTTACAAACTGCTCCGGTTGAAACAGCGGCAAAC
CCATCTGCCGAACAACGGCAAATCGAGGCAGTGGCGGCTAAGATTCAGGCGGCTGTGCAAGATGTGTTGAAAGATTAA

Upstream 100 bases:

>100_bases
TGCCGTCTGAAGCCGCGTTCAGACGGCATTTGTCGGCGGAGTACGGCAGATTCCGCTATAATGTCGGCAATTTTAACCCG
CTTGAACAAAAGGATGACAA

Downstream 100 bases:

>100_bases
TTTTGCGAACTGAAATAGAAAATATCAGTATCATCATTCACACGAATGAGGAAGTTTGGTTTTTTGAATTTTTGCTAATG
TTCACACCGTTATGTTCACG

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MNRLYPHPIIAREGWPIIGGGLALSLLVSMCCGWWSLPFWVFTVFALQFFRDPAREIPQNPEAVLSPVDGRIVVVERARD
PYRDVDALKISIFMNVFNVHSQKSPADCTVTKVVYNKGKFVNADLDKASTENERNAVLATTASGREITFVQVAGLVARRI
LCYTQAGAKLSRGERYGFIRFGSRVDMYLPVDAQAQVAIGDKVNGVSTVLARLPLTAPQIESEPESEPALQTAPVETAAN
PSAEQRQIEAVAAKIQAAVQDVLKD

Sequences:

>Translated_265_residues
MNRLYPHPIIAREGWPIIGGGLALSLLVSMCCGWWSLPFWVFTVFALQFFRDPAREIPQNPEAVLSPVDGRIVVVERARD
PYRDVDALKISIFMNVFNVHSQKSPADCTVTKVVYNKGKFVNADLDKASTENERNAVLATTASGREITFVQVAGLVARRI
LCYTQAGAKLSRGERYGFIRFGSRVDMYLPVDAQAQVAIGDKVNGVSTVLARLPLTAPQIESEPESEPALQTAPVETAAN
PSAEQRQIEAVAAKIQAAVQDVLKD
>Mature_265_residues
MNRLYPHPIIAREGWPIIGGGLALSLLVSMCCGWWSLPFWVFTVFALQFFRDPAREIPQNPEAVLSPVDGRIVVVERARD
PYRDVDALKISIFMNVFNVHSQKSPADCTVTKVVYNKGKFVNADLDKASTENERNAVLATTASGREITFVQVAGLVARRI
LCYTQAGAKLSRGERYGFIRFGSRVDMYLPVDAQAQVAIGDKVNGVSTVLARLPLTAPQIESEPESEPALQTAPVETAAN
PSAEQRQIEAVAAKIQAAVQDVLKD

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 3 subfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSD_NEIM0 (A9M4G3)

Other databases:

- EMBL:   CP000381
- RefSeq:   YP_001599045.1
- EnsemblBacteria:   EBNEIT00000011377
- GeneID:   5796156
- GenomeReviews:   CP000381_GR
- KEGG:   nmn:NMCC_0907
- GeneTree:   EBGT00050000020749
- HOGENOM:   HBG541103
- OMA:   IFMSVFN
- ProtClustDB:   PRK05305
- BioCyc:   NMEN374833:NMCC_0907-MONOMER
- HAMAP:   MF_00664
- InterPro:   IPR003817
- InterPro:   IPR004428
- TIGRFAMs:   TIGR00164

Pfam domain/function: PF02666 PS_Dcarbxylase

EC number: =4.1.1.65

Molecular weight: Translated: 29042; Mature: 29042

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLYPHPIIAREGWPIIGGGLALSLLVSMCCGWWSLPFWVFTVFALQFFRDPAREIPQN
CCCCCCCCEEECCCCCEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHHCCCC
PEAVLSPVDGRIVVVERARDPYRDVDALKISIFMNVFNVHSQKSPADCTVTKVVYNKGKF
CHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCE
VNADLDKASTENERNAVLATTASGREITFVQVAGLVARRILCYTQAGAKLSRGERYGFIR
EECCCCCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
FGSRVDMYLPVDAQAQVAIGDKVNGVSTVLARLPLTAPQIESEPESEPALQTAPVETAAN
ECCEEEEEECCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PSAEQRQIEAVAAKIQAAVQDVLKD
CCHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRLYPHPIIAREGWPIIGGGLALSLLVSMCCGWWSLPFWVFTVFALQFFRDPAREIPQN
CCCCCCCCEEECCCCCEEEHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCHHHHCCCC
PEAVLSPVDGRIVVVERARDPYRDVDALKISIFMNVFNVHSQKSPADCTVTKVVYNKGKF
CHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCE
VNADLDKASTENERNAVLATTASGREITFVQVAGLVARRILCYTQAGAKLSRGERYGFIR
EECCCCCCCCCCCCCEEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE
FGSRVDMYLPVDAQAQVAIGDKVNGVSTVLARLPLTAPQIESEPESEPALQTAPVETAAN
ECCEEEEEECCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PSAEQRQIEAVAAKIQAAVQDVLKD
CCHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA