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The map label for this gene is recJ [H]

Identifier: 161869777

GI number: 161869777

Start: 811098

End: 812798

Strand: Direct

Name: recJ [H]

Synonym: NMCC_0800

Alternate gene names: 161869777

Gene position: 811098-812798 (Clockwise)

Preceding gene: 161869776

Following gene: 161869778

Centisome position: 37.67

GC content: 55.61

Gene sequence:

>1701_bases
ATGTCAGTCAAAATCCAAACCCGATCCATCAATACCGACGTTTTTAATCATTTGCTCACCGCCGGTGCCGATCCTTTAAT
CGCCCGGCTTTGTGCTTCGCGCGGTGTGCAAAGTCCTGCCGAATTGGACGACAAACTCGCTTCCCTCCTGCCTTATCAAT
CGCTGACGAATTGCGAAGCCGCCGCCGGCCGTTTGGCGGATGCGGTTGAGCGTCAGGAAAAAATCCTGATTGTCGCCGAC
TATGATGCCGACGGCGCGACGGCGTGTTCCGTCGGTATGAGCGGTTTGGCGGCGATGGGGGCGAAAGTGGATTTCCTTGT
GCCCAACCGCTTTGAACACGGCTACGGTTTAACGCCCGAGCTGGCTGAAATCGCGGCAGAGCAAGGTGTAGATTTGCTGA
TTACGGTCGATAACGGCATTGCCAGCATCGCAGGCGTGGCGCGCGCGCAGGCTCTGGGTTTGGATGTCATCGTTACCGAC
CACCATCTGCCTGCCGAGACCGTGCCCGACTGCATCATCGTCAATCCGAACCAAAAAGGCTGCGGCTTCCAAAGCAAAAG
TTTGGCGGGCGTGGGCGTGATTTTTTATGTATTGACGGCGTTGCGTGCCGAACTGCGCCGCCGCGATTATTTTTCAGACG
GCATCAAAGAGCCGAATCTGGGCGACCTTTTGGATTTGGTCGCACTCGGCACTGTCGCCGATGTCGTTACTCTAGACCAC
AACAACCGTATCCTCGTGTCGCAAGGTTTGAAACGGATGCGTTCGGGCAAAATGCGCCCCGGCATCCGCGCCTTGTTTGA
AGTAGCACGACGGGATTGGCGCAAGGCTCAGCCGTTTGATATGGGCTTTGCGTTGGGACCGCGCATCAACGCCGCCGGAC
GGCTGGACGATATGTCGGTCGGCATTGACTGTCTGTTGGCGCGAGATGATGTGGAAGCGCAGGAACTGGCGGCCCAGTTA
AACAACCTCAATATCGAACGCCGCGAAATCGAGCAATCCATGCTGCAAGACGCGCTGAGTGATTTTCCCAAAACCCTGCC
TTCAGGTCAGACGACTTTGGTGGCGTATCGCGACGACTTCCATCAAGGCGTGGTCGGTATCGTTGCCAGTCGTCTCAAAG
ACCGTTTTTTTCGTCCGACCATCGTGTTTGCGCCTGCCGACAACGGCGAAGTGCGTGGTTCGGGACGCTCCATTCCCAAT
TTGCACCTGCGCGATGTTTTGGACTTGGTGTCCAAACGCCATCCCGATTTGATTTTGAAATTCGGCGGACACGCAATGGC
GGCGGGTTTGAGCATACTCGAACACAATATTCCCGCGTTTCAGACAGCCTTTGAAGAAGCCGTGCGCGAGATGGTGTGCG
AAGACGATTTGTCGCAGACCTATATTACCGACGGCAGCCTGAAAGCCTGCGACATCACGTTGGAACAGGCGCAAAACCTC
GCCCGCCACGTTTGGGGGCAGGGCTTCGCGCCGCCGAGTTTTACCGACGAATTTCACGTTGTCCGCCAGCAGCCTTTGGG
TGCGGAAGGCAAACATAAAAAAGTCTGGCTGCAAAAAGACGGCTACGAATTTGAAGCCATGTTTTGGCGTTGTAGCGAAG
ACATTCCCGAATACATCCGCACGGTGTACCGCCCCGTTGCCAACGAATGGCGGAATAATCTCGAATTGCAGCTTTATATC
GACTACTGGGAAGCGGTGTAG

Upstream 100 bases:

>100_bases
TGGGTGCGGTCGTGGATGCCGCCCGCAAATGAACAGCAATGCCGTCTGAAAAGCTTTCAGACGGCATTTTAAGCACACAC
GCACAGTAAAACCCCACGTT

Downstream 100 bases:

>100_bases
AGGCGGCGGAACGCCGTTTGAATGTGATTTCTGTTCCTTCATTTGCCTGTTAGTACGACGGGAATGTTCCCAATCGGAAA
AGAAAGTAAAGGGCGTTAAT

Product: single-stranded-DNA-specific exonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 565

Protein sequence:

>566_residues
MSVKIQTRSINTDVFNHLLTAGADPLIARLCASRGVQSPAELDDKLASLLPYQSLTNCEAAAGRLADAVERQEKILIVAD
YDADGATACSVGMSGLAAMGAKVDFLVPNRFEHGYGLTPELAEIAAEQGVDLLITVDNGIASIAGVARAQALGLDVIVTD
HHLPAETVPDCIIVNPNQKGCGFQSKSLAGVGVIFYVLTALRAELRRRDYFSDGIKEPNLGDLLDLVALGTVADVVTLDH
NNRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKAQPFDMGFALGPRINAAGRLDDMSVGIDCLLARDDVEAQELAAQL
NNLNIERREIEQSMLQDALSDFPKTLPSGQTTLVAYRDDFHQGVVGIVASRLKDRFFRPTIVFAPADNGEVRGSGRSIPN
LHLRDVLDLVSKRHPDLILKFGGHAMAAGLSILEHNIPAFQTAFEEAVREMVCEDDLSQTYITDGSLKACDITLEQAQNL
ARHVWGQGFAPPSFTDEFHVVRQQPLGAEGKHKKVWLQKDGYEFEAMFWRCSEDIPEYIRTVYRPVANEWRNNLELQLYI
DYWEAV

Sequences:

>Translated_566_residues
MSVKIQTRSINTDVFNHLLTAGADPLIARLCASRGVQSPAELDDKLASLLPYQSLTNCEAAAGRLADAVERQEKILIVAD
YDADGATACSVGMSGLAAMGAKVDFLVPNRFEHGYGLTPELAEIAAEQGVDLLITVDNGIASIAGVARAQALGLDVIVTD
HHLPAETVPDCIIVNPNQKGCGFQSKSLAGVGVIFYVLTALRAELRRRDYFSDGIKEPNLGDLLDLVALGTVADVVTLDH
NNRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKAQPFDMGFALGPRINAAGRLDDMSVGIDCLLARDDVEAQELAAQL
NNLNIERREIEQSMLQDALSDFPKTLPSGQTTLVAYRDDFHQGVVGIVASRLKDRFFRPTIVFAPADNGEVRGSGRSIPN
LHLRDVLDLVSKRHPDLILKFGGHAMAAGLSILEHNIPAFQTAFEEAVREMVCEDDLSQTYITDGSLKACDITLEQAQNL
ARHVWGQGFAPPSFTDEFHVVRQQPLGAEGKHKKVWLQKDGYEFEAMFWRCSEDIPEYIRTVYRPVANEWRNNLELQLYI
DYWEAV
>Mature_565_residues
SVKIQTRSINTDVFNHLLTAGADPLIARLCASRGVQSPAELDDKLASLLPYQSLTNCEAAAGRLADAVERQEKILIVADY
DADGATACSVGMSGLAAMGAKVDFLVPNRFEHGYGLTPELAEIAAEQGVDLLITVDNGIASIAGVARAQALGLDVIVTDH
HLPAETVPDCIIVNPNQKGCGFQSKSLAGVGVIFYVLTALRAELRRRDYFSDGIKEPNLGDLLDLVALGTVADVVTLDHN
NRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKAQPFDMGFALGPRINAAGRLDDMSVGIDCLLARDDVEAQELAAQLN
NLNIERREIEQSMLQDALSDFPKTLPSGQTTLVAYRDDFHQGVVGIVASRLKDRFFRPTIVFAPADNGEVRGSGRSIPNL
HLRDVLDLVSKRHPDLILKFGGHAMAAGLSILEHNIPAFQTAFEEAVREMVCEDDLSQTYITDGSLKACDITLEQAQNLA
RHVWGQGFAPPSFTDEFHVVRQQPLGAEGKHKKVWLQKDGYEFEAMFWRCSEDIPEYIRTVYRPVANEWRNNLELQLYID
YWEAV

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=579, Percent_Identity=47.4956822107081, Blast_Score=474, Evalue=1e-135,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008279
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 62362; Mature: 62231

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKIQTRSINTDVFNHLLTAGADPLIARLCASRGVQSPAELDDKLASLLPYQSLTNCEA
CCEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHCCHHH
AAGRLADAVERQEKILIVADYDADGATACSVGMSGLAAMGAKVDFLVPNRFEHGYGLTPE
HHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHH
LAEIAAEQGVDLLITVDNGIASIAGVARAQALGLDVIVTDHHLPAETVPDCIIVNPNQKG
HHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEECCCCCC
CGFQSKSLAGVGVIFYVLTALRAELRRRDYFSDGIKEPNLGDLLDLVALGTVADVVTLDH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEECC
NNRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKAQPFDMGFALGPRINAAGRLDDMSV
CCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCC
GIDCLLARDDVEAQELAAQLNNLNIERREIEQSMLQDALSDFPKTLPSGQTTLVAYRDDF
CEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCH
HQGVVGIVASRLKDRFFRPTIVFAPADNGEVRGSGRSIPNLHLRDVLDLVSKRHPDLILK
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEE
FGGHAMAAGLSILEHNIPAFQTAFEEAVREMVCEDDLSQTYITDGSLKACDITLEQAQNL
ECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHEECCCCCEEEEEEHHHHHHH
ARHVWGQGFAPPSFTDEFHVVRQQPLGAEGKHKKVWLQKDGYEFEAMFWRCSEDIPEYIR
HHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHH
TVYRPVANEWRNNLELQLYIDYWEAV
HHHHHHHHHHHCCCEEEEEEEEECCC
>Mature Secondary Structure 
SVKIQTRSINTDVFNHLLTAGADPLIARLCASRGVQSPAELDDKLASLLPYQSLTNCEA
CEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHCCHHH
AAGRLADAVERQEKILIVADYDADGATACSVGMSGLAAMGAKVDFLVPNRFEHGYGLTPE
HHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHH
LAEIAAEQGVDLLITVDNGIASIAGVARAQALGLDVIVTDHHLPAETVPDCIIVNPNQKG
HHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCEEEECCCCCC
CGFQSKSLAGVGVIFYVLTALRAELRRRDYFSDGIKEPNLGDLLDLVALGTVADVVTLDH
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHEEEECC
NNRILVSQGLKRMRSGKMRPGIRALFEVARRDWRKAQPFDMGFALGPRINAAGRLDDMSV
CCEEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCCCC
GIDCLLARDDVEAQELAAQLNNLNIERREIEQSMLQDALSDFPKTLPSGQTTLVAYRDDF
CEEEEEECCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCH
HQGVVGIVASRLKDRFFRPTIVFAPADNGEVRGSGRSIPNLHLRDVLDLVSKRHPDLILK
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEE
FGGHAMAAGLSILEHNIPAFQTAFEEAVREMVCEDDLSQTYITDGSLKACDITLEQAQNL
ECCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHEECCCCCEEEEEEHHHHHHH
ARHVWGQGFAPPSFTDEFHVVRQQPLGAEGKHKKVWLQKDGYEFEAMFWRCSEDIPEYIR
HHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCEEEEECCCCEEEHHHHHHHHHHHHHHH
TVYRPVANEWRNNLELQLYIDYWEAV
HHHHHHHHHHHCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1987126; 9278503; 2649886 [H]