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The map label for this gene is scpB [H]

Identifier: 161869682

GI number: 161869682

Start: 710624

End: 711226

Strand: Direct

Name: scpB [H]

Synonym: NMCC_0700

Alternate gene names: 161869682

Gene position: 710624-711226 (Clockwise)

Preceding gene: 161869681

Following gene: 161869683

Centisome position: 33.0

GC content: 56.88

Gene sequence:

>603_bases
ATGACCGACAAAATTTCTCCCGACGCACTAATTGAAGCCGCACTGCTGACCCAAACCGAACCGCTGACCGAAAAATCTAT
GCGCGAATTGTGTGTGCCGCCACTGTCGCAGGACAAACTGATTGATGTGTTGGCGCAGTTGAAAACGCGTTGGCAGGATA
GGGCGTTGCAACTGGTGCATACGCAAGAGGGCTGGCGTTTTCAGATTGTTCAGACGGCATTCGAGCGGCTGGGCAGCCTG
CAAGAACAGCGTGCGCCGCGTTACTCCCGCGCCGTGATGGAAACACTGGCGATTATCGCCTACCAGCAGCCCGTAACGCG
CGGCGACATCGAGGGCATACGCGGCGTGGCGGTGTCGCAGAACGTGATGCAGACCTTGCAGGATCGGGGGTGGATTGAAG
TCATCGGACATCGGGACACATTGGGAAAACCCGCATTGTGGGCGACAACGGCAACTTTTCTCAGCGATTTGCGCTTGGAC
GGTCTGGAAGAACTTCCGCCGCTGACCGAACTGGGCGAACTGGTTTTACCCGATTTAATGGAAATGCCGCCTACGGATGA
AGAAGAGCCGGAAGCCGTACCGTCCGATACCCTGCCCAACTGA

Upstream 100 bases:

>100_bases
AGAATGCCGTCTGAAAAATATTTTTCAGGCAGCTTCTCTCTACTCCAACCGATTTCAGACGGCATATCCAAACCCATGCC
GTTTCAGCACGGATACCCGT

Downstream 100 bases:

>100_bases
AATTCCAAATGCCGTCTGAAACGCACATTGCTTCAGACGGCATTTCAACAAATAAGCAGATAAAAACAAGCACTAAGCAA
AATTAAGGAAAAACTTATTT

Product: segregation and condensation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MTDKISPDALIEAALLTQTEPLTEKSMRELCVPPLSQDKLIDVLAQLKTRWQDRALQLVHTQEGWRFQIVQTAFERLGSL
QEQRAPRYSRAVMETLAIIAYQQPVTRGDIEGIRGVAVSQNVMQTLQDRGWIEVIGHRDTLGKPALWATTATFLSDLRLD
GLEELPPLTELGELVLPDLMEMPPTDEEEPEAVPSDTLPN

Sequences:

>Translated_200_residues
MTDKISPDALIEAALLTQTEPLTEKSMRELCVPPLSQDKLIDVLAQLKTRWQDRALQLVHTQEGWRFQIVQTAFERLGSL
QEQRAPRYSRAVMETLAIIAYQQPVTRGDIEGIRGVAVSQNVMQTLQDRGWIEVIGHRDTLGKPALWATTATFLSDLRLD
GLEELPPLTELGELVLPDLMEMPPTDEEEPEAVPSDTLPN
>Mature_199_residues
TDKISPDALIEAALLTQTEPLTEKSMRELCVPPLSQDKLIDVLAQLKTRWQDRALQLVHTQEGWRFQIVQTAFERLGSLQ
EQRAPRYSRAVMETLAIIAYQQPVTRGDIEGIRGVAVSQNVMQTLQDRGWIEVIGHRDTLGKPALWATTATFLSDLRLDG
LEELPPLTELGELVLPDLMEMPPTDEEEPEAVPSDTLPN

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 22465; Mature: 22334

Theoretical pI: Translated: 4.25; Mature: 4.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDKISPDALIEAALLTQTEPLTEKSMRELCVPPLSQDKLIDVLAQLKTRWQDRALQLVH
CCCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
TQEGWRFQIVQTAFERLGSLQEQRAPRYSRAVMETLAIIAYQQPVTRGDIEGIRGVAVSQ
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
NVMQTLQDRGWIEVIGHRDTLGKPALWATTATFLSDLRLDGLEELPPLTELGELVLPDLM
HHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHH
EMPPTDEEEPEAVPSDTLPN
CCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TDKISPDALIEAALLTQTEPLTEKSMRELCVPPLSQDKLIDVLAQLKTRWQDRALQLVH
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
TQEGWRFQIVQTAFERLGSLQEQRAPRYSRAVMETLAIIAYQQPVTRGDIEGIRGVAVSQ
CCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
NVMQTLQDRGWIEVIGHRDTLGKPALWATTATFLSDLRLDGLEELPPLTELGELVLPDLM
HHHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHHHH
EMPPTDEEEPEAVPSDTLPN
CCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]