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The map label for this gene is yqaA [C]

Identifier: 161869461

GI number: 161869461

Start: 491807

End: 492235

Strand: Reverse

Name: yqaA [C]

Synonym: NMCC_0473

Alternate gene names: 161869461

Gene position: 492235-491807 (Counterclockwise)

Preceding gene: 161869465

Following gene: 161869460

Centisome position: 22.86

GC content: 59.21

Gene sequence:

>429_bases
TTGAGACTGTTTGCAATGATACCCTCCTACACCTACGCCGCCCTCGCCTTTTCCGCCTTCACTTCCGCCACCCTCCTGCC
CGGCACATCCGAAGCCGCCTTTGCCCTGTTCGTCCGCCGCTTTCCCGAACACGCATACGGCGCGTTGCTGTGCGCCGGCC
TTGCCAACGGATTGGGCAGTATGGTTTCCTATTGGATGGGACGTTTGCTGCCTTCCCGAAAAATGCCGTCTGAAAAAACA
CTGAATCTGATGCGGCGTTTCGGTATTTGGCTGCTTCCGTTTGCCTGGCTGCCCGTCGTCGGCGACGCACTGCCGCTTGC
CGCCGGCTGGCTGCGGTTGAATCCGTGGACAAGCGGGCTGATGCTGGTTATCGGCAAAACGGCGCGTTACGCCTTCATTC
TGTGGGGAATGCAATATTACGCCGCCTGA

Upstream 100 bases:

>100_bases
CACCTTAGAGAATCGTTCTCTTTGAGCTAAGGCGAGGCAACGCCGTACTGGTTTTTGTTAATCCACTATACCGTACAATC
CGTCGCCGATTTTTGCCTGT

Downstream 100 bases:

>100_bases
ACCGTGCGTTATAATGCCGACCGCACAAACCGACTGCACAAAAAAATGAACAGACACATCCGCCAAGAAATTTTCGAACG
CTTCCGCGCCGCCAACCCCC

Product: membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MRLFAMIPSYTYAALAFSAFTSATLLPGTSEAAFALFVRRFPEHAYGALLCAGLANGLGSMVSYWMGRLLPSRKMPSEKT
LNLMRRFGIWLLPFAWLPVVGDALPLAAGWLRLNPWTSGLMLVIGKTARYAFILWGMQYYAA

Sequences:

>Translated_142_residues
MRLFAMIPSYTYAALAFSAFTSATLLPGTSEAAFALFVRRFPEHAYGALLCAGLANGLGSMVSYWMGRLLPSRKMPSEKT
LNLMRRFGIWLLPFAWLPVVGDALPLAAGWLRLNPWTSGLMLVIGKTARYAFILWGMQYYAA
>Mature_142_residues
MRLFAMIPSYTYAALAFSAFTSATLLPGTSEAAFALFVRRFPEHAYGALLCAGLANGLGSMVSYWMGRLLPSRKMPSEKT
LNLMRRFGIWLLPFAWLPVVGDALPLAAGWLRLNPWTSGLMLVIGKTARYAFILWGMQYYAA

Specific function: Unknown

COG id: COG1238

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yqaA [H]

Homologues:

Organism=Escherichia coli, GI1789045, Length=118, Percent_Identity=37.2881355932203, Blast_Score=74, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 15749; Mature: 15749

Theoretical pI: Translated: 10.49; Mature: 10.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFAMIPSYTYAALAFSAFTSATLLPGTSEAAFALFVRRFPEHAYGALLCAGLANGLGS
CCEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
MVSYWMGRLLPSRKMPSEKTLNLMRRFGIWLLPFAWLPVVGDALPLAAGWLRLNPWTSGL
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEECCCCCCC
MLVIGKTARYAFILWGMQYYAA
EEEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRLFAMIPSYTYAALAFSAFTSATLLPGTSEAAFALFVRRFPEHAYGALLCAGLANGLGS
CCEEEECCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
MVSYWMGRLLPSRKMPSEKTLNLMRRFGIWLLPFAWLPVVGDALPLAAGWLRLNPWTSGL
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCEEECCCCCCC
MLVIGKTARYAFILWGMQYYAA
EEEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]