| Definition | Neisseria meningitidis 053442, complete genome. |
|---|---|
| Accession | NC_010120 |
| Length | 2,153,416 |
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The map label for this gene is 161869440
Identifier: 161869440
GI number: 161869440
Start: 472239
End: 473945
Strand: Direct
Name: 161869440
Synonym: NMCC_0451
Alternate gene names: NA
Gene position: 472239-473945 (Clockwise)
Preceding gene: 161869439
Following gene: 161869441
Centisome position: 21.93
GC content: 47.98
Gene sequence:
>1707_bases GTGTGTGCGCCAGCACGCATGCGTTCCATGATTTACGGCTCAATGCCGTCTGAAAAGCTCACAATTTTTCAGACGGCATT TGTTATGCAAGTAAATATTCAGATTCCCTGTATGCTGTACAGACGCGGGAGTGTTAAGCCCCCCTTGTTTGAAGCTCCGC GGCTCCTGCCGAGCTTCACCGACCCCGTTGTGCCCAAGCTCTCTGCTCCCGGCGGCTACATTGTCGACATCCCCAAAGGC AATCTGAAAACCGAAATCGAAAAGCTGGCCAAACAGCCCGAGTATGCCTATCTGAAACAGCTCCAAGTAGCGAAAAACGT CAACTGGAACCAGGTGCAACTGGCTTACGATAAATGGGACTATAAGCAGGAAGGCTTAACCAGAGCCGGTGCAGCGATTA TCGCGCTGGCTGTTACCGTGGTTACTGCGGGCGCGGGAGTCGGAGCCGCACTAGGCTTAAACGGCGCAGCCGCAGCAGCG GCCGATGCCGCCTTTGCCTCACTCGCTTCTCAGGCTTCCGTATCGCTCATCAACAATAAAGGCGATGTCGGCAAAACCCT GAAAGAGCTGGGCAGAAGCAGCACGGTGAAAAATCTGGTGGTTGCCGCCGCTACCGCAGGCGTAGCCGACAAAATCGGCG CTTCGGCACTGAACAATGTCAGCGATAAGCAGTGGATCAACAACCTGACCGTCAACCTAGCCAATGCGGGCAGTGCCGCA CTGATTAATACCGCTGTCAACGGCGGCAGCCTGAAAGACAATCTGGAAGCGAATATCCTTGCGGCTTTGGTCAATACCGC GCATGGAGAAGCAGCCAGTAAAATCAAACAGTTGGATCAGCACTACATAGTCCACAAGATTGCCCATGCCATAGCGGGCT GTGCGGCAGCGGCGGCGAATAAGGGCAAGTGTCAGGATGGTGCGATCGGTGCGGCTGTGGGTGAGATTGTCGGGGAGGCT TTGGTTAAAAATACCGATTTTAGCGATATGACCCCGGAACAATTAGATCTGGAAGTTAAGAAAATTACCGCCTATGCCAA ACTTGCGGCAGGTACAGTTGCAGGCGTAACGGGAGGAGATGTCAATACTGCTGCACAAACCGCACAAAACGCGGTAGAAA ATAATGCGGTTAAAGCTGTTGTAACTGCTGCAAAAGTGGTTTATAAGGTAGCCAGAAAAGGATTAAAAAACGGGAAAATC AACGTTAGAGATTTAAAACAGACGTTGAAAGACGAAGGTTATAATTTAGCCGACAACCTGACCACCTTATTCGACGAAAC ATTGGATTGGAACGATGCCAAAGCCGTTATTGATATTGTCGTCGGAACAGAGCTGAATCGCGCTAATAAAGAGGAAGCGG CACAAAAGGTCAAGGAAGTTTTAGAAAAAAATCGTCCTTATATCCCTAATAAAGGTGCTGTACCGAATATGAGTACATAC ATGAAAAATAATCCTTTTGGAAAACAGCTGGCTCAAATTTCAGAAAAGACAACGCTTCCGACGCAGCAAGGGCAGTCTGT CTTCTTGGTAAAAAGAAACCAAGGGTTATTAAAAACCGGTGATAGGTTTTATTTAGATGGCCAACATAAAAATCATTTAG AGGTTTTTGATAAAAATGGGAACTTTAAGTTTGTTCTAAATATGGATGGTTCGCTTAACCAAATGAAAACTGGGGCAGCA AAAGGTCGTAAATTAAACTTAAAATAG
Upstream 100 bases:
>100_bases CACAATTTTTATTAAAAACCCCTTTAACCATTCCAATGAAACGTGATGAATTTAAATAAACAAGCCGTAGCCTGCATGAA CCCTAAAATCCACGTGTAGC
Downstream 100 bases:
>100_bases GAAATTTTATGGAAACATTGAATGATATAAAAAAAATCTTGATTAATGTGGGGCTTTATCAAGGGTTTGATTTGACAGAT CCAAAAGTATCAGAAGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 568; Mature: 568
Protein sequence:
>568_residues MCAPARMRSMIYGSMPSEKLTIFQTAFVMQVNIQIPCMLYRRGSVKPPLFEAPRLLPSFTDPVVPKLSAPGGYIVDIPKG NLKTEIEKLAKQPEYAYLKQLQVAKNVNWNQVQLAYDKWDYKQEGLTRAGAAIIALAVTVVTAGAGVGAALGLNGAAAAA ADAAFASLASQASVSLINNKGDVGKTLKELGRSSTVKNLVVAAATAGVADKIGASALNNVSDKQWINNLTVNLANAGSAA LINTAVNGGSLKDNLEANILAALVNTAHGEAASKIKQLDQHYIVHKIAHAIAGCAAAAANKGKCQDGAIGAAVGEIVGEA LVKNTDFSDMTPEQLDLEVKKITAYAKLAAGTVAGVTGGDVNTAAQTAQNAVENNAVKAVVTAAKVVYKVARKGLKNGKI NVRDLKQTLKDEGYNLADNLTTLFDETLDWNDAKAVIDIVVGTELNRANKEEAAQKVKEVLEKNRPYIPNKGAVPNMSTY MKNNPFGKQLAQISEKTTLPTQQGQSVFLVKRNQGLLKTGDRFYLDGQHKNHLEVFDKNGNFKFVLNMDGSLNQMKTGAA KGRKLNLK
Sequences:
>Translated_568_residues MCAPARMRSMIYGSMPSEKLTIFQTAFVMQVNIQIPCMLYRRGSVKPPLFEAPRLLPSFTDPVVPKLSAPGGYIVDIPKG NLKTEIEKLAKQPEYAYLKQLQVAKNVNWNQVQLAYDKWDYKQEGLTRAGAAIIALAVTVVTAGAGVGAALGLNGAAAAA ADAAFASLASQASVSLINNKGDVGKTLKELGRSSTVKNLVVAAATAGVADKIGASALNNVSDKQWINNLTVNLANAGSAA LINTAVNGGSLKDNLEANILAALVNTAHGEAASKIKQLDQHYIVHKIAHAIAGCAAAAANKGKCQDGAIGAAVGEIVGEA LVKNTDFSDMTPEQLDLEVKKITAYAKLAAGTVAGVTGGDVNTAAQTAQNAVENNAVKAVVTAAKVVYKVARKGLKNGKI NVRDLKQTLKDEGYNLADNLTTLFDETLDWNDAKAVIDIVVGTELNRANKEEAAQKVKEVLEKNRPYIPNKGAVPNMSTY MKNNPFGKQLAQISEKTTLPTQQGQSVFLVKRNQGLLKTGDRFYLDGQHKNHLEVFDKNGNFKFVLNMDGSLNQMKTGAA KGRKLNLK >Mature_568_residues MCAPARMRSMIYGSMPSEKLTIFQTAFVMQVNIQIPCMLYRRGSVKPPLFEAPRLLPSFTDPVVPKLSAPGGYIVDIPKG NLKTEIEKLAKQPEYAYLKQLQVAKNVNWNQVQLAYDKWDYKQEGLTRAGAAIIALAVTVVTAGAGVGAALGLNGAAAAA ADAAFASLASQASVSLINNKGDVGKTLKELGRSSTVKNLVVAAATAGVADKIGASALNNVSDKQWINNLTVNLANAGSAA LINTAVNGGSLKDNLEANILAALVNTAHGEAASKIKQLDQHYIVHKIAHAIAGCAAAAANKGKCQDGAIGAAVGEIVGEA LVKNTDFSDMTPEQLDLEVKKITAYAKLAAGTVAGVTGGDVNTAAQTAQNAVENNAVKAVVTAAKVVYKVARKGLKNGKI NVRDLKQTLKDEGYNLADNLTTLFDETLDWNDAKAVIDIVVGTELNRANKEEAAQKVKEVLEKNRPYIPNKGAVPNMSTY MKNNPFGKQLAQISEKTTLPTQQGQSVFLVKRNQGLLKTGDRFYLDGQHKNHLEVFDKNGNFKFVLNMDGSLNQMKTGAA KGRKLNLK
Specific function: Unknown
COG id: COG3210
COG function: function code U; Large exoproteins involved in heme utilization or adhesion
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60339; Mature: 60339
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCAPARMRSMIYGSMPSEKLTIFQTAFVMQVNIQIPCMLYRRGSVKPPLFEAPRLLPSFT CCCHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEECEEEEEECCCCCCCCCCCCCCCCCCC DPVVPKLSAPGGYIVDIPKGNLKTEIEKLAKQPEYAYLKQLQVAKNVNWNQVQLAYDKWD CCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCC YKQEGLTRAGAAIIALAVTVVTAGAGVGAALGLNGAAAAAADAAFASLASQASVSLINNK CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHEEEECCC GDVGKTLKELGRSSTVKNLVVAAATAGVADKIGASALNNVSDKQWINNLTVNLANAGSAA CHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHEEEEECCCCCE LINTAVNGGSLKDNLEANILAALVNTAHGEAASKIKQLDQHYIVHKIAHAIAGCAAAAAN EEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KGKCQDGAIGAAVGEIVGEALVKNTDFSDMTPEQLDLEVKKITAYAKLAAGTVAGVTGGD CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCC VNTAAQTAQNAVENNAVKAVVTAAKVVYKVARKGLKNGKINVRDLKQTLKDEGYNLADNL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHH TTLFDETLDWNDAKAVIDIVVGTELNRANKEEAAQKVKEVLEKNRPYIPNKGAVPNMSTY HHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH MKNNPFGKQLAQISEKTTLPTQQGQSVFLVKRNQGLLKTGDRFYLDGQHKNHLEVFDKNG HCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEECCCEEEECCCCCCCEEEEECCC NFKFVLNMDGSLNQMKTGAAKGRKLNLK CEEEEEECCCCHHHHHHCCCCCCEECCC >Mature Secondary Structure MCAPARMRSMIYGSMPSEKLTIFQTAFVMQVNIQIPCMLYRRGSVKPPLFEAPRLLPSFT CCCHHHHHHHHHCCCCCCCEEEEEEEEEEEEEEECEEEEEECCCCCCCCCCCCCCCCCCC DPVVPKLSAPGGYIVDIPKGNLKTEIEKLAKQPEYAYLKQLQVAKNVNWNQVQLAYDKWD CCCCCCCCCCCCEEEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHCCCCCEEEEEECCCC YKQEGLTRAGAAIIALAVTVVTAGAGVGAALGLNGAAAAAADAAFASLASQASVSLINNK CHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHEEEECCC GDVGKTLKELGRSSTVKNLVVAAATAGVADKIGASALNNVSDKQWINNLTVNLANAGSAA CHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHEEEEECCCCCE LINTAVNGGSLKDNLEANILAALVNTAHGEAASKIKQLDQHYIVHKIAHAIAGCAAAAAN EEEECCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KGKCQDGAIGAAVGEIVGEALVKNTDFSDMTPEQLDLEVKKITAYAKLAAGTVAGVTGGD CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEECCCCCC VNTAAQTAQNAVENNAVKAVVTAAKVVYKVARKGLKNGKINVRDLKQTLKDEGYNLADNL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHH TTLFDETLDWNDAKAVIDIVVGTELNRANKEEAAQKVKEVLEKNRPYIPNKGAVPNMSTY HHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHH MKNNPFGKQLAQISEKTTLPTQQGQSVFLVKRNQGLLKTGDRFYLDGQHKNHLEVFDKNG HCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCEECCCEEEECCCCCCCEEEEECCC NFKFVLNMDGSLNQMKTGAAKGRKLNLK CEEEEEECCCCHHHHHHCCCCCCEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA