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The map label for this gene is secB [H]

Identifier: 161869429

GI number: 161869429

Start: 454755

End: 455198

Strand: Direct

Name: secB [H]

Synonym: NMCC_0437

Alternate gene names: 161869429

Gene position: 454755-455198 (Clockwise)

Preceding gene: 161869428

Following gene: 161869430

Centisome position: 21.12

GC content: 56.08

Gene sequence:

>444_bases
ATGAGCGAAGAACTGCAACCCGTATTCAGCATCGAGCGACTGTATGTCAAAGACTTGTCTTTGGAAGTGCCGCACGCGCC
GCAAATCTTTTTGGAACAGGGCGAGCCTGAAGTGGATATGCGCGTTTCCACCGGCAGCCAAAAGCTGGAAGACGGCTACT
ACAACGTGGACGTTACCGTAACCGTTACCGCCAAGCTGGATAACGAGCGCACGATGTTTTTGAACGAAGTAACCCAAAGC
GGCATCTTCCGTTTGGAAAACATCCCCGAAGAAGATGTGCAGCTGCTGCTGGGCGTGGCGTGTCCGAACATCCTCTTCCC
TTACGCGCGCGAAGCCGTTTCCGGTACGGTAACGCGCGCCGGCTTCCCGCCCGTCCTGCTCGCGCCGATTAATTTTGAGG
CGATTTACCAACAACAGCAGGAAGCCGAAGCCGCCGGGGCTTGA

Upstream 100 bases:

>100_bases
GCGAAACGCACGTCGGCGGATTTACCGACCTCTACCGCCTCCAGCAGGAAGGCGGGCTGGACGGACTGCTGAACCCTTAA
CCCCCAACTAGGAAAACAAA

Downstream 100 bases:

>100_bases
TTCCTGCCTGTCGATGCCGTCTGAATCCGTTTCAGACGGCATTTTTGTTTTCGGATAAAATAGGCGCGTCCAAAGGAATC
TGCCTATGATGTCGCCCGAA

Product: preprotein translocase subunit SecB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 147; Mature: 146

Protein sequence:

>147_residues
MSEELQPVFSIERLYVKDLSLEVPHAPQIFLEQGEPEVDMRVSTGSQKLEDGYYNVDVTVTVTAKLDNERTMFLNEVTQS
GIFRLENIPEEDVQLLLGVACPNILFPYAREAVSGTVTRAGFPPVLLAPINFEAIYQQQQEAEAAGA

Sequences:

>Translated_147_residues
MSEELQPVFSIERLYVKDLSLEVPHAPQIFLEQGEPEVDMRVSTGSQKLEDGYYNVDVTVTVTAKLDNERTMFLNEVTQS
GIFRLENIPEEDVQLLLGVACPNILFPYAREAVSGTVTRAGFPPVLLAPINFEAIYQQQQEAEAAGA
>Mature_146_residues
SEELQPVFSIERLYVKDLSLEVPHAPQIFLEQGEPEVDMRVSTGSQKLEDGYYNVDVTVTVTAKLDNERTMFLNEVTQSG
IFRLENIPEEDVQLLLGVACPNILFPYAREAVSGTVTRAGFPPVLLAPINFEAIYQQQQEAEAAGA

Specific function: One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its r

COG id: COG1952

COG function: function code U; Preprotein translocase subunit SecB

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secB family [H]

Homologues:

Organism=Escherichia coli, GI1790038, Length=149, Percent_Identity=46.3087248322148, Blast_Score=129, Evalue=9e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003708 [H]

Pfam domain/function: PF02556 SecB [H]

EC number: NA

Molecular weight: Translated: 16347; Mature: 16215

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEELQPVFSIERLYVKDLSLEVPHAPQIFLEQGEPEVDMRVSTGSQKLEDGYYNVDVTV
CCCCCCHHHHHHHHHHHHCEEECCCCCEEEEECCCCCEEEEECCCCCHHCCCEEEEEEEE
TVTAKLDNERTMFLNEVTQSGIFRLENIPEEDVQLLLGVACPNILFPYAREAVSGTVTRA
EEEEEECCCCHHHHHHHHHHCCEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCEECC
GFPPVLLAPINFEAIYQQQQEAEAAGA
CCCCEEEECCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SEELQPVFSIERLYVKDLSLEVPHAPQIFLEQGEPEVDMRVSTGSQKLEDGYYNVDVTV
CCCCCHHHHHHHHHHHHCEEECCCCCEEEEECCCCCEEEEECCCCCHHCCCEEEEEEEE
TVTAKLDNERTMFLNEVTQSGIFRLENIPEEDVQLLLGVACPNILFPYAREAVSGTVTRA
EEEEEECCCCHHHHHHHHHHCCEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCEECC
GFPPVLLAPINFEAIYQQQQEAEAAGA
CCCCEEEECCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA