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The map label for this gene is pglB2 [H]

Identifier: 161869399

GI number: 161869399

Start: 417598

End: 419175

Strand: Reverse

Name: pglB2 [H]

Synonym: NMCC_0406

Alternate gene names: 161869399

Gene position: 419175-417598 (Counterclockwise)

Preceding gene: 161869400

Following gene: 161869397

Centisome position: 19.47

GC content: 51.77

Gene sequence:

>1578_bases
ATGAGTAAAGCCGTCAAACGCCTGTTCGACATCATCGCATCCGCATCGGGGCTGATTGTCCTCTCACCCGTTTTCCTGAT
TTTGGCGTACCTCATCCGCAAGAATCTGGGTTCGCCCGTCTTCTTCATTCAAGAACGCCCCGGAAAGGACGGAAAACCTT
TTAAAATGGTCAAATTCCGTTCCATGCGCGACGCGCTTGATTCAGACGGCATTCCGCTGCCCGACAGCGAGCGGCTCACA
CCCTTCGGCAAAAAACTGCGTGCCGCTAGTTTGGACGAACTGCCTGAATTATGGAATGTCTTAAAAGGCGACATGAGCCT
GGTCGGCCCGCGCCCGCTGCTGATGCAATATCTGCCGCTGTACGACAACTTCCAAAACCGCCGCCACGAAATGAAACCCG
GCATTACCGGCTGGGCGCAGGTCAACGGGCGCAACGCGCTTTCGTGGGACGAAAAGTTCGCCTGCGATGTTTGGTACACT
GACCATTACAGTTTTTGGCTAGATATGAAAATCCTGTTTTTGACAGTCAAAAAAGTCTTGATCAAAGAAGGCATTTCGGC
GGAAGGGGAAGCCACTATGCCTTATTTCACTGGAAATCAAACTAAGGAAAAAAATAATATACTGATTCTGTCGGCAGGTC
GCCGTGTCGAATTGGTGCAGGACTTCCAAACCGAAGCCGCACGTTTTTCAGACGGCATCAGCGTTTTTGCCACTGACCTC
AACCCCCGCATGTCTTCTGCCTGCCATGTTTCGGACGGTTCATTTGAAGTGCCGCCGATTAGTGCCGATTCATATATCGA
CAGCATTTTCAATCTGGCGGTACGCGAAAATATCGGTTTAATCATCCCAACCATAGACACCGAACTGCAAAAGCTGGCAG
ACGAGCGCGAACGCTTTGAAGCGGCAAGTGTCCACATCGTCGTTTCCGATTCGGACTTCATCGCACAATGCCGCGACAAA
CGGAAAACCGCCACCTTGTTTGCCCGCTACGGCATACGCTCACCCGAAATTTACGACCGCAAGAAGTTGGTTTTCCCTTG
CTTCGCCAAGCCTTATGACGGCAGCCGCGCCATCGGTGCAAAACGGATTGACACACCTGCCGACCTGACACCGGAAGTCT
TGGCAGACACCAAATTAATGTTCTGTCAGTTTATCGACATCGAAAATAAATTTTCCGAGTTTACCGTCGATATGTATTAC
GACCGTCAATGCCGTCTGAAATGCGCCATCCCGCGAAAACGCTTGGAAGTGCGCTCCGGCGAAATCAGCAAAGGCGTTAC
CTGCAAAAACAGCCTCTACCAAACGCTGCTGGAAAAAATGTCGGTATTGCAGGGCGCGCGCGGCTGTATCACGGCGCAGT
TCTTCTACAACGAAGAAACCGGCGAATTCTACGGCGTGGAAATCAACCCCCGCTTCGGCGGTGGCTTCCCGCTGACGTAT
GCCGCAGGCGGCAATTATCCGAGCCGGTTGATGCGCGAATACCTCGGCGACGAAGAAATCCCGTTTTCAGACGACTGGGA
AAACAACCTCATTATGTTGCGCTACGATGCCAAGGTCTTGGTTCATGAAAACGATTAA

Upstream 100 bases:

>100_bases
AAACGCAAAAACGACCCCGTTCAGTCCGATGAAATCGTCCGCCGCTTCAGGCGCGACATTTCCTATCGGAAAATCGTCAA
CCTGATTGAAAGATTGGCAA

Downstream 100 bases:

>100_bases
TCCTGAAACCACCGTCATCGTCTTCGACTTGGACGATACCCTGTATTCGGAATACGAATACAAGCTCTCCGGTATCCGTT
CGGTCATCGATACCGTTGCC

Product: putative carbamoyl phosphate synthase large subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 525; Mature: 524

Protein sequence:

>525_residues
MSKAVKRLFDIIASASGLIVLSPVFLILAYLIRKNLGSPVFFIQERPGKDGKPFKMVKFRSMRDALDSDGIPLPDSERLT
PFGKKLRAASLDELPELWNVLKGDMSLVGPRPLLMQYLPLYDNFQNRRHEMKPGITGWAQVNGRNALSWDEKFACDVWYT
DHYSFWLDMKILFLTVKKVLIKEGISAEGEATMPYFTGNQTKEKNNILILSAGRRVELVQDFQTEAARFSDGISVFATDL
NPRMSSACHVSDGSFEVPPISADSYIDSIFNLAVRENIGLIIPTIDTELQKLADERERFEAASVHIVVSDSDFIAQCRDK
RKTATLFARYGIRSPEIYDRKKLVFPCFAKPYDGSRAIGAKRIDTPADLTPEVLADTKLMFCQFIDIENKFSEFTVDMYY
DRQCRLKCAIPRKRLEVRSGEISKGVTCKNSLYQTLLEKMSVLQGARGCITAQFFYNEETGEFYGVEINPRFGGGFPLTY
AAGGNYPSRLMREYLGDEEIPFSDDWENNLIMLRYDAKVLVHEND

Sequences:

>Translated_525_residues
MSKAVKRLFDIIASASGLIVLSPVFLILAYLIRKNLGSPVFFIQERPGKDGKPFKMVKFRSMRDALDSDGIPLPDSERLT
PFGKKLRAASLDELPELWNVLKGDMSLVGPRPLLMQYLPLYDNFQNRRHEMKPGITGWAQVNGRNALSWDEKFACDVWYT
DHYSFWLDMKILFLTVKKVLIKEGISAEGEATMPYFTGNQTKEKNNILILSAGRRVELVQDFQTEAARFSDGISVFATDL
NPRMSSACHVSDGSFEVPPISADSYIDSIFNLAVRENIGLIIPTIDTELQKLADERERFEAASVHIVVSDSDFIAQCRDK
RKTATLFARYGIRSPEIYDRKKLVFPCFAKPYDGSRAIGAKRIDTPADLTPEVLADTKLMFCQFIDIENKFSEFTVDMYY
DRQCRLKCAIPRKRLEVRSGEISKGVTCKNSLYQTLLEKMSVLQGARGCITAQFFYNEETGEFYGVEINPRFGGGFPLTY
AAGGNYPSRLMREYLGDEEIPFSDDWENNLIMLRYDAKVLVHEND
>Mature_524_residues
SKAVKRLFDIIASASGLIVLSPVFLILAYLIRKNLGSPVFFIQERPGKDGKPFKMVKFRSMRDALDSDGIPLPDSERLTP
FGKKLRAASLDELPELWNVLKGDMSLVGPRPLLMQYLPLYDNFQNRRHEMKPGITGWAQVNGRNALSWDEKFACDVWYTD
HYSFWLDMKILFLTVKKVLIKEGISAEGEATMPYFTGNQTKEKNNILILSAGRRVELVQDFQTEAARFSDGISVFATDLN
PRMSSACHVSDGSFEVPPISADSYIDSIFNLAVRENIGLIIPTIDTELQKLADERERFEAASVHIVVSDSDFIAQCRDKR
KTATLFARYGIRSPEIYDRKKLVFPCFAKPYDGSRAIGAKRIDTPADLTPEVLADTKLMFCQFIDIENKFSEFTVDMYYD
RQCRLKCAIPRKRLEVRSGEISKGVTCKNSLYQTLLEKMSVLQGARGCITAQFFYNEETGEFYGVEINPRFGGGFPLTYA
AGGNYPSRLMREYLGDEEIPFSDDWENNLIMLRYDAKVLVHEND

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles [H]

COG id: COG2148

COG function: function code M; Sugar transferases involved in lipopolysaccharide synthesis

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial sugar transferase family [H]

Homologues:

Organism=Escherichia coli, GI1788360, Length=196, Percent_Identity=38.7755102040816, Blast_Score=129, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003362 [H]

Pfam domain/function: PF02397 Bac_transf [H]

EC number: NA

Molecular weight: Translated: 59646; Mature: 59515

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: PS50975 ATP_GRASP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKAVKRLFDIIASASGLIVLSPVFLILAYLIRKNLGSPVFFIQERPGKDGKPFKMVKFR
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEHHHHH
SMRDALDSDGIPLPDSERLTPFGKKLRAASLDELPELWNVLKGDMSLVGPRPLLMQYLPL
HHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHHH
YDNFQNRRHEMKPGITGWAQVNGRNALSWDEKFACDVWYTDHYSFWLDMKILFLTVKKVL
HHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEEEEEECCEEEEHHHHHHHHHHHHHH
IKEGISAEGEATMPYFTGNQTKEKNNILILSAGRRVELVQDFQTEAARFSDGISVFATDL
HHCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECC
NPRMSSACHVSDGSFEVPPISADSYIDSIFNLAVRENIGLIIPTIDTELQKLADERERFE
CCCCCCCEEECCCCEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCC
AASVHIVVSDSDFIAQCRDKRKTATLFARYGIRSPEIYDRKKLVFPCFAKPYDGSRAIGA
EEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC
KRIDTPADLTPEVLADTKLMFCQFIDIENKFSEFTVDMYYDRQCRLKCAIPRKRLEVRSG
CCCCCCCCCCHHHHHCCCEEEEEEECCCCCCCCEEEEEEECCCEEEEECCCHHHHHCCCC
EISKGVTCKNSLYQTLLEKMSVLQGARGCITAQFFYNEETGEFYGVEINPRFGGGFPLTY
CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCEEE
AAGGNYPSRLMREYLGDEEIPFSDDWENNLIMLRYDAKVLVHEND
ECCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCEEEEECCC
>Mature Secondary Structure 
SKAVKRLFDIIASASGLIVLSPVFLILAYLIRKNLGSPVFFIQERPGKDGKPFKMVKFR
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEHHHHH
SMRDALDSDGIPLPDSERLTPFGKKLRAASLDELPELWNVLKGDMSLVGPRPLLMQYLPL
HHHHHHCCCCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHCCHHHCCCCHHHHHHHHH
YDNFQNRRHEMKPGITGWAQVNGRNALSWDEKFACDVWYTDHYSFWLDMKILFLTVKKVL
HHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEEEEEEECCEEEEHHHHHHHHHHHHHH
IKEGISAEGEATMPYFTGNQTKEKNNILILSAGRRVELVQDFQTEAARFSDGISVFATDL
HHCCCCCCCCCCCCEECCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECC
NPRMSSACHVSDGSFEVPPISADSYIDSIFNLAVRENIGLIIPTIDTELQKLADERERFE
CCCCCCCEEECCCCEECCCCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHCC
AASVHIVVSDSDFIAQCRDKRKTATLFARYGIRSPEIYDRKKLVFPCFAKPYDGSRAIGA
EEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC
KRIDTPADLTPEVLADTKLMFCQFIDIENKFSEFTVDMYYDRQCRLKCAIPRKRLEVRSG
CCCCCCCCCCHHHHHCCCEEEEEEECCCCCCCCEEEEEEECCCEEEEECCCHHHHHCCCC
EISKGVTCKNSLYQTLLEKMSVLQGARGCITAQFFYNEETGEFYGVEINPRFGGGFPLTY
CCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCEEEEEECCCCCCCCCEEE
AAGGNYPSRLMREYLGDEEIPFSDDWENNLIMLRYDAKVLVHEND
ECCCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]