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The map label for this gene is ychJ [C]

Identifier: 161869290

GI number: 161869290

Start: 302697

End: 303080

Strand: Reverse

Name: ychJ [C]

Synonym: NMCC_0295

Alternate gene names: 161869290

Gene position: 303080-302697 (Counterclockwise)

Preceding gene: 161869291

Following gene: 161869288

Centisome position: 14.07

GC content: 50.78

Gene sequence:

>384_bases
TTGTACTGTCTTCGGCTTCGTCGCCTTGTCCTGATTTTTGTTAATCCACTATACATCATCGCTACTACCGTTCCGGCGCA
ACAGGCATTCCTCGATGCCGCCGAACTGATGCAATGGAGTATAGAAACCGAAGGGCTGGGCTTGAACGTCATCTCGCACA
AGATACTCGGCAAAGACCACGCCCAAGTCGAATTTGAAGCCTACTTCCGAGACGGACAACACCGATCCGCGCATCACGAA
CTGTCCGGCTTCGTCAACATCGGCGGACAATGGTATTTTATCGATCCCACCGTTCCGCATCCTGCGATGAAACAACCCTG
CATTTGCGGATCAGGCAAAAAATTCAAAGCCTGCTGCGGCAAATATCTGAAACCTGTCGCATAA

Upstream 100 bases:

>100_bases
TAGTGGATTAACAAAAACCAGTACAGCGTTGCCTCGCCTTAGCTCAAAGAGAACGATTCTCTAAGGTGCTGAAGCACCGA
GTGAATCGGTTCCGTACTAT

Downstream 100 bases:

>100_bases
AAATGCCGTCTGAACGTTCAGACGGCATTTTCAACGTGCAAAAAAAACCATTCATACCAAGGGTAAGTATGAATGGTCAA
TACATTGCGGGAAAACGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 127

Protein sequence:

>127_residues
MYCLRLRRLVLIFVNPLYIIATTVPAQQAFLDAAELMQWSIETEGLGLNVISHKILGKDHAQVEFEAYFRDGQHRSAHHE
LSGFVNIGGQWYFIDPTVPHPAMKQPCICGSGKKFKACCGKYLKPVA

Sequences:

>Translated_127_residues
MYCLRLRRLVLIFVNPLYIIATTVPAQQAFLDAAELMQWSIETEGLGLNVISHKILGKDHAQVEFEAYFRDGQHRSAHHE
LSGFVNIGGQWYFIDPTVPHPAMKQPCICGSGKKFKACCGKYLKPVA
>Mature_127_residues
MYCLRLRRLVLIFVNPLYIIATTVPAQQAFLDAAELMQWSIETEGLGLNVISHKILGKDHAQVEFEAYFRDGQHRSAHHE
LSGFVNIGGQWYFIDPTVPHPAMKQPCICGSGKKFKACCGKYLKPVA

Specific function: Unknown

COG id: COG3012

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0225 family [H]

Homologues:

Organism=Escherichia coli, GI1787484, Length=119, Percent_Identity=41.1764705882353, Blast_Score=81, Evalue=2e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004027
- InterPro:   IPR023006 [H]

Pfam domain/function: PF02810 SEC-C [H]

EC number: NA

Molecular weight: Translated: 14291; Mature: 14291

Theoretical pI: Translated: 8.49; Mature: 8.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYCLRLRRLVLIFVNPLYIIATTVPAQQAFLDAAELMQWSIETEGLGLNVISHKILGKDH
CHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCC
AQVEFEAYFRDGQHRSAHHELSGFVNIGGQWYFIDPTVPHPAMKQPCICGSGKKFKACCG
CEEEEEEEECCCCCCCCHHHCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
KYLKPVA
HHCCCCC
>Mature Secondary Structure
MYCLRLRRLVLIFVNPLYIIATTVPAQQAFLDAAELMQWSIETEGLGLNVISHKILGKDH
CHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCC
AQVEFEAYFRDGQHRSAHHELSGFVNIGGQWYFIDPTVPHPAMKQPCICGSGKKFKACCG
CEEEEEEEECCCCCCCCHHHCCCEEECCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHH
KYLKPVA
HHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11248100 [H]