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The map label for this gene is 161869234

Identifier: 161869234

GI number: 161869234

Start: 249889

End: 250542

Strand: Reverse

Name: 161869234

Synonym: NMCC_0239

Alternate gene names: NA

Gene position: 250542-249889 (Counterclockwise)

Preceding gene: 161869238

Following gene: 161871031

Centisome position: 11.63

GC content: 46.94

Gene sequence:

>654_bases
ATGAAGATAACGCACTGCAAATTAAAGAAAAAAGTACAGAAAGAACTGCTCCGTTTTTTTGTACTCGAAGTTACCGCCCG
TTCTGCCGCCGATATTTTGGGTATCCATCCCAATTCGGCAGCACTGTTCTACCGTAAAATCCGCACGGTTATCAACCATC
ATTTGGCCTTGGCTGCCGATGAGGTTTTTGAGGGCTCTGTCGAGCCGGACGAAAGCGATTTCGGCGGACGGCGTAAAGGC
AGACGTGGTCGCGGTGCGGCAGGAAAAGTGGTTGTTTTCGGCATTCTGAAACGCAACAGACGGATCTATACCGTTGTGGT
GGATAATGCCAAGTCTGAAACGTTACTCCCTGTCATCAAAAAGAAAATCATGCCGGACAGTATTGTTTATACCGATAGTC
TGAGCAGCTATGACAAGCTGGACGTAAGCGGTTTTATCCATCACCGCATCAACCATTCTAAGGAGTTTGCAGACCGCCAG
AACCACATTAACGGCATTGAGAACTTTTGGAATCAGGCAAAACGCGTCTTGCGAAAATACAACGGAATCGATTGCAAATC
TTTCCCGCTGTTCTTGAAAGAATGCGAATTTCGATTTAACTTCGGCACACCGTCCCGGCAGCTAAAAATCCTACAGGATT
GGTGTGGGATTTAG

Upstream 100 bases:

>100_bases
CAAATTCAAGTGAGGCGGAAAAAATTTATTTCCGCCGTTTTTTATAGTGGACTAAATTTAAGGGGCTGTACTAGATTAGC
AGATATGTTACCCTCGAAAT

Downstream 100 bases:

>100_bases
GGCTAATCTAGTACAGCCCCTAAAATTTTTCGTTTTCAAACCTTCACCGCTTGCCATCAGCGTTAAATTTTTTTACGATA
AGCACATAGATTGTAAACAA

Product: insertion element IS1016 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAALFYRKIRTVINHHLALAADEVFEGSVEPDESDFGGRRKG
RRGRGAAGKVVVFGILKRNRRIYTVVVDNAKSETLLPVIKKKIMPDSIVYTDSLSSYDKLDVSGFIHHRINHSKEFADRQ
NHINGIENFWNQAKRVLRKYNGIDCKSFPLFLKECEFRFNFGTPSRQLKILQDWCGI

Sequences:

>Translated_217_residues
MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAALFYRKIRTVINHHLALAADEVFEGSVEPDESDFGGRRKG
RRGRGAAGKVVVFGILKRNRRIYTVVVDNAKSETLLPVIKKKIMPDSIVYTDSLSSYDKLDVSGFIHHRINHSKEFADRQ
NHINGIENFWNQAKRVLRKYNGIDCKSFPLFLKECEFRFNFGTPSRQLKILQDWCGI
>Mature_217_residues
MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAALFYRKIRTVINHHLALAADEVFEGSVEPDESDFGGRRKG
RRGRGAAGKVVVFGILKRNRRIYTVVVDNAKSETLLPVIKKKIMPDSIVYTDSLSSYDKLDVSGFIHHRINHSKEFADRQ
NHINGIENFWNQAKRVLRKYNGIDCKSFPLFLKECEFRFNFGTPSRQLKILQDWCGI

Specific function: Unknown

COG id: COG3676

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To insertion element IS1016 transposase [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24931; Mature: 24931

Theoretical pI: Translated: 10.52; Mature: 10.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAALFYRKIRTVINHHLALAAD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHH
EVFEGSVEPDESDFGGRRKGRRGRGAAGKVVVFGILKRNRRIYTVVVDNAKSETLLPVIK
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHH
KKIMPDSIVYTDSLSSYDKLDVSGFIHHRINHSKEFADRQNHINGIENFWNQAKRVLRKY
HHCCCCCEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
NGIDCKSFPLFLKECEFRFNFGTPSRQLKILQDWCGI
CCCCCCHHHHHHHHCCEEECCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKITHCKLKKKVQKELLRFFVLEVTARSAADILGIHPNSAALFYRKIRTVINHHLALAAD
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHH
EVFEGSVEPDESDFGGRRKGRRGRGAAGKVVVFGILKRNRRIYTVVVDNAKSETLLPVIK
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCHHHHHHH
KKIMPDSIVYTDSLSSYDKLDVSGFIHHRINHSKEFADRQNHINGIENFWNQAKRVLRKY
HHCCCCCEEEECCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHH
NGIDCKSFPLFLKECEFRFNFGTPSRQLKILQDWCGI
CCCCCCHHHHHHHHCCEEECCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]