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The map label for this gene is gpsA [H]

Identifier: 161869132

GI number: 161869132

Start: 128561

End: 129550

Strand: Direct

Name: gpsA [H]

Synonym: NMCC_0126

Alternate gene names: 161869132

Gene position: 128561-129550 (Clockwise)

Preceding gene: 161869130

Following gene: 161869133

Centisome position: 5.97

GC content: 56.57

Gene sequence:

>990_bases
ATGAAAATTACCGTTATCGGCGCAGGTTCGTGGGGTACGGCGCTCGCCCTGCACTTTTCCCAACACGGCAACCGCGTATC
CCTGTGGACGCGCAACGCAGACCAAGTCCGCCAAATGCAGGAAGCGCGTGAAAACAAACGCGGACTGCCCGGCTTTTCCT
TTCCCGAAACCTTGGAAGTGTGTGCGGATTTGGCAGACGCGCTCAAAGACAGCGGACTTGTCCTTATCGTAACCTCCGTT
GCCGGATTGAGAAGCAGCGCAGAGCTGCTCAAACAGTACGGCGCGGGACACCTCCCCGTCCTCGCCGCCTGCAAAGGATT
CGAGCAGGATACAGGGCTGCTGACCTTTCAAGTATTGAAAGAAGTATTGCCCGACAATAAGAAAATCGGCGTACTCTCCG
GCCCGAGTTTTGCACAGGAACTCGCCAAACAACTGCCCTGCGCCGTCGTCCTCGCCTCCGAAAACCAAGAGTGGATTGAA
GAACTCGTACCGCAGCTCAACACGACCGTCATGAGGCTTTACGGCAGTACCGATGTTATCGGCGTGGCGGTTGGCGGCGC
GGTAAAAAATGTTATGGCGATTGCCACCGGATTGTCCGATGGCCTAGAGTACGGGCTTAACGCCCGTGCCGCACTGGTTA
CGCGCGGATTAGCTGAAATCACCCGCCTTGCCTCCGCAATGGGCGCACAGCCCAAAACCATGATGGGGCTGGCAGGCATC
GGCGACCTCATCTTGACCTGCACCGGCGCACTCTCACGCAACCGCCGCGTCGGCTTGGGTTTGGCAGAAGGCAAGGAACT
GCATCAGGTGCTGGTCGAAATCGGACACGTTTCCGAAGGGGTCAGCACGATAGAAGAAGTCTTCAATACTGCCTGTAAGT
ACCAAATCGACATGCCGATTACCCAAACCCTGCTGCAACTCATCCGCAAAGAAATGACCCCTCAGCAGGTCGTCGAAAGG
CTGATGGAACGTAGCGCGCGTTTTGAATAA

Upstream 100 bases:

>100_bases
GCCGTCTGAACACCTTTCAGACGGCATTTCCCTGACCGCACTTGCAGAGAAACACCGATTGTTTTAAAGTGAACGGCAGT
GATATGTTGAAAGACGACCA

Downstream 100 bases:

>100_bases
ACAACAGACAGATGCCGTCTGAAGCCTTCAGACGGCATACGGACAGGTAAGGTTATGAAACAAAATATCGAAAAACTCGA
AAGCAGCGTTTATACGCTGG

Product: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase

Products: NA

Alternate protein names: NAD(P)H-dependent glycerol-3-phosphate dehydrogenase [H]

Number of amino acids: Translated: 329; Mature: 329

Protein sequence:

>329_residues
MKITVIGAGSWGTALALHFSQHGNRVSLWTRNADQVRQMQEARENKRGLPGFSFPETLEVCADLADALKDSGLVLIVTSV
AGLRSSAELLKQYGAGHLPVLAACKGFEQDTGLLTFQVLKEVLPDNKKIGVLSGPSFAQELAKQLPCAVVLASENQEWIE
ELVPQLNTTVMRLYGSTDVIGVAVGGAVKNVMAIATGLSDGLEYGLNARAALVTRGLAEITRLASAMGAQPKTMMGLAGI
GDLILTCTGALSRNRRVGLGLAEGKELHQVLVEIGHVSEGVSTIEEVFNTACKYQIDMPITQTLLQLIRKEMTPQQVVER
LMERSARFE

Sequences:

>Translated_329_residues
MKITVIGAGSWGTALALHFSQHGNRVSLWTRNADQVRQMQEARENKRGLPGFSFPETLEVCADLADALKDSGLVLIVTSV
AGLRSSAELLKQYGAGHLPVLAACKGFEQDTGLLTFQVLKEVLPDNKKIGVLSGPSFAQELAKQLPCAVVLASENQEWIE
ELVPQLNTTVMRLYGSTDVIGVAVGGAVKNVMAIATGLSDGLEYGLNARAALVTRGLAEITRLASAMGAQPKTMMGLAGI
GDLILTCTGALSRNRRVGLGLAEGKELHQVLVEIGHVSEGVSTIEEVFNTACKYQIDMPITQTLLQLIRKEMTPQQVVER
LMERSARFE
>Mature_329_residues
MKITVIGAGSWGTALALHFSQHGNRVSLWTRNADQVRQMQEARENKRGLPGFSFPETLEVCADLADALKDSGLVLIVTSV
AGLRSSAELLKQYGAGHLPVLAACKGFEQDTGLLTFQVLKEVLPDNKKIGVLSGPSFAQELAKQLPCAVVLASENQEWIE
ELVPQLNTTVMRLYGSTDVIGVAVGGAVKNVMAIATGLSDGLEYGLNARAALVTRGLAEITRLASAMGAQPKTMMGLAGI
GDLILTCTGALSRNRRVGLGLAEGKELHQVLVEIGHVSEGVSTIEEVFNTACKYQIDMPITQTLLQLIRKEMTPQQVVER
LMERSARFE

Specific function: De novo phospholipid biosynthesis; glycerol-3 phosphate formation. [C]

COG id: COG0240

COG function: function code C; Glycerol-3-phosphate dehydrogenase

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI33695088, Length=308, Percent_Identity=26.9480519480519, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI24307999, Length=315, Percent_Identity=27.3015873015873, Blast_Score=94, Evalue=1e-19,
Organism=Escherichia coli, GI1790037, Length=333, Percent_Identity=42.042042042042, Blast_Score=246, Evalue=2e-66,
Organism=Caenorhabditis elegans, GI32564399, Length=348, Percent_Identity=29.0229885057471, Blast_Score=107, Evalue=6e-24,
Organism=Caenorhabditis elegans, GI193210136, Length=357, Percent_Identity=28.2913165266106, Blast_Score=105, Evalue=4e-23,
Organism=Caenorhabditis elegans, GI32564403, Length=357, Percent_Identity=28.2913165266106, Blast_Score=104, Evalue=5e-23,
Organism=Caenorhabditis elegans, GI17507425, Length=316, Percent_Identity=25.9493670886076, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI193210134, Length=341, Percent_Identity=27.2727272727273, Blast_Score=91, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6320181, Length=360, Percent_Identity=26.3888888888889, Blast_Score=103, Evalue=4e-23,
Organism=Saccharomyces cerevisiae, GI6324513, Length=355, Percent_Identity=27.0422535211268, Blast_Score=102, Evalue=1e-22,
Organism=Drosophila melanogaster, GI17136202, Length=341, Percent_Identity=24.0469208211144, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI17136204, Length=341, Percent_Identity=24.0469208211144, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI17136200, Length=341, Percent_Identity=24.0469208211144, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI22026922, Length=350, Percent_Identity=23.7142857142857, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI281362270, Length=236, Percent_Identity=25.8474576271186, Blast_Score=73, Evalue=3e-13,
Organism=Drosophila melanogaster, GI45551945, Length=236, Percent_Identity=25.8474576271186, Blast_Score=73, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR013328
- InterPro:   IPR006168
- InterPro:   IPR006109
- InterPro:   IPR011128
- InterPro:   IPR016040 [H]

Pfam domain/function: PF07479 NAD_Gly3P_dh_C; PF01210 NAD_Gly3P_dh_N [H]

EC number: =1.1.1.94 [H]

Molecular weight: Translated: 35338; Mature: 35338

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS00957 NAD_G3PDH

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKITVIGAGSWGTALALHFSQHGNRVSLWTRNADQVRQMQEARENKRGLPGFSFPETLEV
CEEEEEECCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHH
CADLADALKDSGLVLIVTSVAGLRSSAELLKQYGAGHLPVLAACKGFEQDTGLLTFQVLK
HHHHHHHHHCCCEEEEEECHHCCHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHH
EVLPDNKKIGVLSGPSFAQELAKQLPCAVVLASENQEWIEELVPQLNTTVMRLYGSTDVI
HHCCCCCEEEEECCCHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEE
GVAVGGAVKNVMAIATGLSDGLEYGLNARAALVTRGLAEITRLASAMGAQPKTMMGLAGI
EEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GDLILTCTGALSRNRRVGLGLAEGKELHQVLVEIGHVSEGVSTIEEVFNTACKYQIDMPI
HHHHHHHHHHHCCCCEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCH
TQTLLQLIRKEMTPQQVVERLMERSARFE
HHHHHHHHHHCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKITVIGAGSWGTALALHFSQHGNRVSLWTRNADQVRQMQEARENKRGLPGFSFPETLEV
CEEEEEECCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCCCHHHHHH
CADLADALKDSGLVLIVTSVAGLRSSAELLKQYGAGHLPVLAACKGFEQDTGLLTFQVLK
HHHHHHHHHCCCEEEEEECHHCCHHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHH
EVLPDNKKIGVLSGPSFAQELAKQLPCAVVLASENQEWIEELVPQLNTTVMRLYGSTDVI
HHCCCCCEEEEECCCHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCEE
GVAVGGAVKNVMAIATGLSDGLEYGLNARAALVTRGLAEITRLASAMGAQPKTMMGLAGI
EEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH
GDLILTCTGALSRNRRVGLGLAEGKELHQVLVEIGHVSEGVSTIEEVFNTACKYQIDMPI
HHHHHHHHHHHCCCCEECCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCCH
TQTLLQLIRKEMTPQQVVERLMERSARFE
HHHHHHHHHHCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA