Click here to switch to the map view.

The map label for this gene is 161869024

Identifier: 161869024

GI number: 161869024

Start: 3557

End: 4039

Strand: Direct

Name: 161869024

Synonym: NMCC_0006

Alternate gene names: NA

Gene position: 3557-4039 (Clockwise)

Preceding gene: NA

Following gene: 161869025

Centisome position: 0.17

GC content: 52.8

Gene sequence:

>483_bases
ATGAAATACTTGAATCTTGCCGCAATCACCCTTGCCGCCACATTTGCCGCACATACCGCCTCGGCAGACGAACTGGCCGG
ATGGAAAGACAACACCCCACAAAGCCTGCAATCACTCAAAGCCCCCGTACGCATCGTCAACCTTTGGGCAACCTGGTGCG
GCCCGTGCCGAAAAGAGATGCCCGCCATGTCCAAATGGTACAAAGCGCAGAAAAAAGGCAGCGTCGATATGGTCGGCATC
GCGCTCGACACATCCGACAATATCGGCAACTTCCTCAAACAAACTCCTGTTTCCTACCCGATTTGGCGTTACACCGAGGC
GAACAGCCGAAACTTTATGAAATCCTACGGAAACAATGTCGGCGTACTGCCCTTTACCGTCGTCGAAGCCCCGAAATGCG
GGTACAAACAAACCATTACCGGGGAAGTGAACGAAAAAAGCCTGACCGAAGCCGTCAAACTCGCCCATTCAAAATGCCGT
TAA

Upstream 100 bases:

>100_bases
ATCCCCTTATTATCGGCTACACAGGGTTTTACTCAATATCCCGCCTACAACCGTACCAAACGGTTTACAATACCCGAATC
GACATACAAAGGACAAAACG

Downstream 100 bases:

>100_bases
ACGCCGGATGCCGTCTGAAGCCGCTTCAGACGGCATTTTTCCCGCCCGACCTTCGGTATCCGCCAAACTTATCCACTATC
TAAAAACAGGCGGAATCTTT

Product: thioredoxin-related transmembrane protein

Products: NA

Alternate protein names: Thioredoxin-Related Transmembrane Protein; Redoxin Domain Protein; Thioredoxin; Thioredoxin Family Protein; Antioxidant AhpC/TSA Family; Redoxin; Thioredoxin-Like Protein; Redoxin Superfamily Protein; ThiolDisulfide Interchange Protein TlpA; Redoxin Protein; Disulfide Reductase TlpA-Like Family; Disulfide Reductase Tlpa-Like Family; ThiolDisulfide Interchange Protein; Thiol-Disulfide Oxidoreductase ResA; Thioredoxin Family

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MKYLNLAAITLAATFAAHTASADELAGWKDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGI
ALDTSDNIGNFLKQTPVSYPIWRYTEANSRNFMKSYGNNVGVLPFTVVEAPKCGYKQTITGEVNEKSLTEAVKLAHSKCR

Sequences:

>Translated_160_residues
MKYLNLAAITLAATFAAHTASADELAGWKDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGI
ALDTSDNIGNFLKQTPVSYPIWRYTEANSRNFMKSYGNNVGVLPFTVVEAPKCGYKQTITGEVNEKSLTEAVKLAHSKCR
>Mature_160_residues
MKYLNLAAITLAATFAAHTASADELAGWKDNTPQSLQSLKAPVRIVNLWATWCGPCRKEMPAMSKWYKAQKKGSVDMVGI
ALDTSDNIGNFLKQTPVSYPIWRYTEANSRNFMKSYGNNVGVLPFTVVEAPKCGYKQTITGEVNEKSLTEAVKLAHSKCR

Specific function: Unknown

COG id: COG0526

COG function: function code OC; Thiol-disulfide isomerase and thioredoxins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17693; Mature: 17693

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS00194 THIOREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLNLAAITLAATFAAHTASADELAGWKDNTPQSLQSLKAPVRIVNLWATWCGPCRKEM
CCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHC
PAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTEANSRNFMKSYGNNV
HHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCC
GVLPFTVVEAPKCGYKQTITGEVNEKSLTEAVKLAHSKCR
CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKYLNLAAITLAATFAAHTASADELAGWKDNTPQSLQSLKAPVRIVNLWATWCGPCRKEM
CCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHC
PAMSKWYKAQKKGSVDMVGIALDTSDNIGNFLKQTPVSYPIWRYTEANSRNFMKSYGNNV
HHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHCCCCCCEEEECCCCCHHHHHHHCCCC
GVLPFTVVEAPKCGYKQTITGEVNEKSLTEAVKLAHSKCR
CCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA