Click here to switch to the map view.

The map label for this gene is fliP

Identifier: 161760581

GI number: 161760581

Start: 2048241

End: 2048981

Strand: Reverse

Name: fliP

Synonym: YPTB1693

Alternate gene names: 161760581

Gene position: 2048981-2048241 (Counterclockwise)

Preceding gene: 51596030

Following gene: 51596028

Centisome position: 43.18

GC content: 51.42

Gene sequence:

>741_bases
ATGTCGGTTATCAATAAAACCACACTGGGGCTGCTCACCTTATTTTGCTCGCCTTCGGTATTGGCTCAACTGCCTGGGAT
CATCAGCCAACCGTTGGCTAATGGTGGACAGAGTTGGTCTTTACCCGTGCAAACGCTGGTGTTCATCACCACGCTGAGTT
TTTTGCCCGCGGCGTTACTGATGATGACCAGTTTTACCCGCATCATTATTGTGCTCGGGTTACTGCGTAACGCGATGGGC
ACCCCTTCGGCCCCGCCGAATCAGGTGATGCTGGGGCTGGCACTGTTTCTGACCTTTTTTATTATGTCACCGGTGTTTGA
CAAAGTGTATCAAGAGGCTTATCTGCCCTTCAGTCAGGATAAAATCAGCATGGACGTGGCGTTGGATAAAGGCTCACAAC
CGTTGCGGGAGTTTATGCTGCGCCAAACGCGGGAATCTGATCTGGCGCTGTATGCCCGGTTGGCAAACCTGCCGCCGCTG
GAAGGCCCCGAAATGGTTCCGATGCGTATTCTGCTGCCCGCCTATGTCACCAGTGAGTTGAAAACGGCATTCCAAATTGG
TTTTACCGTATTTATTCCGTTCCTGATTATCGATTTGGTGGTCGCCAGTGTGCTGATGGCGCTGGGGATGATGATGGTTC
CGCCTGCCAGTATCTCGCTACCGTTCAAGCTGATGCTATTTGTTCTGGTTGATGGCTGGCAATTGTTACTGGGTTCACTG
GCACAGAGTTTTTATAGCTGA

Upstream 100 bases:

>100_bases
ATCCGGAAAAATCGGCATGACGTCCCATCGCCCTGTTTTTATTAGCAAACGTTCTCTCATCACTGGCGCGCTGTTCTGCC
GGATGTGGCGCACCATAATA

Downstream 100 bases:

>100_bases
TTAACCCGGTATATTTCACGTTACAGGTGCGTTGATGGTGGGTGCTCTCCCGTCACTGGCTTATCGCGTATTCACTCCCA
CAGTTAGGCAAGAGGCAGAC

Product: flagellar biosynthesis protein FliP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSVINKTTLGLLTLFCSPSVLAQLPGIISQPLANGGQSWSLPVQTLVFITTLSFLPAALLMMTSFTRIIIVLGLLRNAMG
TPSAPPNQVMLGLALFLTFFIMSPVFDKVYQEAYLPFSQDKISMDVALDKGSQPLREFMLRQTRESDLALYARLANLPPL
EGPEMVPMRILLPAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPASISLPFKLMLFVLVDGWQLLLGSL
AQSFYS

Sequences:

>Translated_246_residues
MSVINKTTLGLLTLFCSPSVLAQLPGIISQPLANGGQSWSLPVQTLVFITTLSFLPAALLMMTSFTRIIIVLGLLRNAMG
TPSAPPNQVMLGLALFLTFFIMSPVFDKVYQEAYLPFSQDKISMDVALDKGSQPLREFMLRQTRESDLALYARLANLPPL
EGPEMVPMRILLPAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPASISLPFKLMLFVLVDGWQLLLGSL
AQSFYS
>Mature_245_residues
SVINKTTLGLLTLFCSPSVLAQLPGIISQPLANGGQSWSLPVQTLVFITTLSFLPAALLMMTSFTRIIIVLGLLRNAMGT
PSAPPNQVMLGLALFLTFFIMSPVFDKVYQEAYLPFSQDKISMDVALDKGSQPLREFMLRQTRESDLALYARLANLPPLE
GPEMVPMRILLPAYVTSELKTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPASISLPFKLMLFVLVDGWQLLLGSLA
QSFYS

Specific function: Plays a role in the flagellum-specific transport system [H]

COG id: COG1338

COG function: function code NU; Flagellar biosynthesis pathway, component FliP

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein. Bacterial flagellum basal body (By similarity) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliP/mopC/spaP family [H]

Homologues:

Organism=Escherichia coli, GI1788259, Length=231, Percent_Identity=83.5497835497836, Blast_Score=388, Evalue=1e-109,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005837
- InterPro:   IPR005838 [H]

Pfam domain/function: PF00813 FliP [H]

EC number: NA

Molecular weight: Translated: 26999; Mature: 26868

Theoretical pI: Translated: 6.69; Mature: 6.69

Prosite motif: PS01060 FLIP_1 ; PS01061 FLIP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCC
>Mature Secondary Structure 
SVINKTTLGLLTLFCSPSVLAQLPGIISQPLANGGQSWSLPVQTLVFITTLSFLPAALL
CCCHHHHHHHHHHHHCHHHHHHCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
MMTSFTRIIIVLGLLRNAMGTPSAPPNQVMLGLALFLTFFIMSPVFDKVYQEAYLPFSQD
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
KISMDVALDKGSQPLREFMLRQTRESDLALYARLANLPPLEGPEMVPMRILLPAYVTSEL
HHHHEEEECCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHH
KTAFQIGFTVFIPFLIIDLVVASVLMALGMMMVPPASISLPFKLMLFVLVDGWQLLLGSL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
AQSFYS
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]