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The map label for this gene is yeaV [H]

Identifier: 161760569

GI number: 161760569

Start: 2995550

End: 2997016

Strand: Reverse

Name: yeaV [H]

Synonym: YPTB2531

Alternate gene names: 161760569

Gene position: 2997016-2995550 (Counterclockwise)

Preceding gene: 51596851

Following gene: 51596849

Centisome position: 63.17

GC content: 48.94

Gene sequence:

>1467_bases
GTGCTGCTTGGCTTAATATTGGTACTTTATATCGCGGTGAGCAAATACGGCAATATTCGTCTGGGTGAGGGAAAGCCTGA
GTATCGTACTATCCCATGGTTGTTTATGTTTATTTGCGCGGGACTTGGTTCATCAACCCTGTATTGGGGGGTGATGGAGT
GGGCTTATTACTATCAGACACCGGGTCTGAATATTGCGCCAAAAACGCCGAAGGCACTGGAATACAGCGTCAGTTACTCC
TTCTTTCATTGGGGGATCAGTGCGTGGGCAACTTATGCGTTGGCCTCGCTGATTATGGCTTACCATTTTCATGTCAGAAA
AAACAAAGGGTTAAGTTTATCGGGGATTATCTCGGCCATTACCGGGGTCAACCCGCAGGGTTTTTGGGGGCGTCTGGTCG
ATCTGATCTTTTTAATCGCGACAATAGGGGCGCTGACGATCTCATTAGTGATCACCGCCGCCACATTTACTGGTGGACTG
ACTGCGCTTATCGGCGTGCCTAATAACTTTGCGGTGCAGGCTGGCGTGATGTTGGTAGCGGCAGTTATTTTTTCCCTCAG
TTCGTATATCGGTATTGATCATGGTATGCAACGCCTGAGCAAAATGGTGGGATGGGGCGCTTTTGGTTTTGCCGTTCTGG
TGCTTTTGGTGGGGCCAACTGAATTCATTATCAATAACACCATTAACTCCATCGGATTAACCACACAAAATTTCCTGCAA
ATGAGCCTGTTCACCGACCCTATGGGGGATGGCCGCTTCACCCGCAGTTGGACGGTCTTTTATTGGTTATGGTGGATTTC
ATATACCCCCGGTGTTGCGATGTTTGTGACGCGGGTTTCACGTGGTCGCAAACTCAAAGAGGTTATATGGGCTTTGCTGC
TGGGCAGTTCGTTGGGTTGCTGGTTCTTCTTTGGGATACTGGAAAGCTACGCGATACAACAGTTTATTAGTGGTGCGTTA
GATGTTCCCCTCATCTTAAATACTCAGGGCGGGGAGACTGCGGTACAAATGCTGCTCAGTGCGCTACCCATGGGCAAATT
ATTCCTTGCTGCCTATCTATTCATCATGATTATTTTCCTGGCTTCACATATGGATGCGGTGGCGTACTGTATGGCGGCAA
CCAGCACCCGTAATCTGCGGGAAGGCGAAGATCCTAATCGTATGCTGCGGCTGTTTTGGTGTGTAGTGATTACACTGATC
CCTCTCTCTATTCTGTTTGCTGGTGCCTCGTTGGATACCATGAAAACGACGGTTGTGCTCACTGCGCTGCCTTTTTTATT
GATTCTCTTGATCGAGGTTTATGGCTTTATCCGCTGGATTAAGCAGGATTATGCCCATGTTCCCGCGCACCTTATTGAGC
AAAGTACCCCGCAAGTCATGTTGCCGGCTGAATCTTTACCGCCTGCTACTGCGTCAATGTTAGTCGTGGAAACTGCGGCG
CCACCCGCCAGTAAGCATAACCAGTAA

Upstream 100 bases:

>100_bases
TGCTTTGGCATTCAGCTTATTTCCGCAGCAAAGCAGCCAAATGGCAGAGACCATTTTTAGTGGTGTTACCCGGCTACTGG
GATCGACGATCCAAATATTA

Downstream 100 bases:

>100_bases
GCATAAATAGCAGGCTCTGTTTTTACGTTTCTATGTCGTTGTATGCCGTGTCGGTATTCCCTAAATGTATGACTAAAAAT
TTTACCTATAACACCAAGAT

Product: transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 488; Mature: 488

Protein sequence:

>488_residues
MLLGLILVLYIAVSKYGNIRLGEGKPEYRTIPWLFMFICAGLGSSTLYWGVMEWAYYYQTPGLNIAPKTPKALEYSVSYS
FFHWGISAWATYALASLIMAYHFHVRKNKGLSLSGIISAITGVNPQGFWGRLVDLIFLIATIGALTISLVITAATFTGGL
TALIGVPNNFAVQAGVMLVAAVIFSLSSYIGIDHGMQRLSKMVGWGAFGFAVLVLLVGPTEFIINNTINSIGLTTQNFLQ
MSLFTDPMGDGRFTRSWTVFYWLWWISYTPGVAMFVTRVSRGRKLKEVIWALLLGSSLGCWFFFGILESYAIQQFISGAL
DVPLILNTQGGETAVQMLLSALPMGKLFLAAYLFIMIIFLASHMDAVAYCMAATSTRNLREGEDPNRMLRLFWCVVITLI
PLSILFAGASLDTMKTTVVLTALPFLLILLIEVYGFIRWIKQDYAHVPAHLIEQSTPQVMLPAESLPPATASMLVVETAA
PPASKHNQ

Sequences:

>Translated_488_residues
MLLGLILVLYIAVSKYGNIRLGEGKPEYRTIPWLFMFICAGLGSSTLYWGVMEWAYYYQTPGLNIAPKTPKALEYSVSYS
FFHWGISAWATYALASLIMAYHFHVRKNKGLSLSGIISAITGVNPQGFWGRLVDLIFLIATIGALTISLVITAATFTGGL
TALIGVPNNFAVQAGVMLVAAVIFSLSSYIGIDHGMQRLSKMVGWGAFGFAVLVLLVGPTEFIINNTINSIGLTTQNFLQ
MSLFTDPMGDGRFTRSWTVFYWLWWISYTPGVAMFVTRVSRGRKLKEVIWALLLGSSLGCWFFFGILESYAIQQFISGAL
DVPLILNTQGGETAVQMLLSALPMGKLFLAAYLFIMIIFLASHMDAVAYCMAATSTRNLREGEDPNRMLRLFWCVVITLI
PLSILFAGASLDTMKTTVVLTALPFLLILLIEVYGFIRWIKQDYAHVPAHLIEQSTPQVMLPAESLPPATASMLVVETAA
PPASKHNQ
>Mature_488_residues
MLLGLILVLYIAVSKYGNIRLGEGKPEYRTIPWLFMFICAGLGSSTLYWGVMEWAYYYQTPGLNIAPKTPKALEYSVSYS
FFHWGISAWATYALASLIMAYHFHVRKNKGLSLSGIISAITGVNPQGFWGRLVDLIFLIATIGALTISLVITAATFTGGL
TALIGVPNNFAVQAGVMLVAAVIFSLSSYIGIDHGMQRLSKMVGWGAFGFAVLVLLVGPTEFIINNTINSIGLTTQNFLQ
MSLFTDPMGDGRFTRSWTVFYWLWWISYTPGVAMFVTRVSRGRKLKEVIWALLLGSSLGCWFFFGILESYAIQQFISGAL
DVPLILNTQGGETAVQMLLSALPMGKLFLAAYLFIMIIFLASHMDAVAYCMAATSTRNLREGEDPNRMLRLFWCVVITLI
PLSILFAGASLDTMKTTVVLTALPFLLILLIEVYGFIRWIKQDYAHVPAHLIEQSTPQVMLPAESLPPATASMLVVETAA
PPASKHNQ

Specific function: Unknown

COG id: COG1292

COG function: function code M; Choline-glycine betaine transporter

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BCCT transporter (TC 2.A.15) family [H]

Homologues:

Organism=Escherichia coli, GI1788102, Length=466, Percent_Identity=78.3261802575107, Blast_Score=753, Evalue=0.0,
Organism=Escherichia coli, GI1786224, Length=439, Percent_Identity=27.3348519362187, Blast_Score=219, Evalue=3e-58,
Organism=Escherichia coli, GI1786506, Length=464, Percent_Identity=25.8620689655172, Blast_Score=169, Evalue=4e-43,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000060
- InterPro:   IPR018093 [H]

Pfam domain/function: PF02028 BCCT [H]

EC number: NA

Molecular weight: Translated: 53777; Mature: 53777

Theoretical pI: Translated: 8.94; Mature: 8.94

Prosite motif: PS00888 CNMP_BINDING_1 ; PS01303 BCCT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLGLILVLYIAVSKYGNIRLGEGKPEYRTIPWLFMFICAGLGSSTLYWGVMEWAYYYQT
CHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEC
PGLNIAPKTPKALEYSVSYSFFHWGISAWATYALASLIMAYHFHVRKNKGLSLSGIISAI
CCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
TGVNPQGFWGRLVDLIFLIATIGALTISLVITAATFTGGLTALIGVPNNFAVQAGVMLVA
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH
AVIFSLSSYIGIDHGMQRLSKMVGWGAFGFAVLVLLVGPTEFIINNTINSIGLTTQNFLQ
HHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHCCHHHCCCCHHHHHH
MSLFTDPMGDGRFTRSWTVFYWLWWISYTPGVAMFVTRVSRGRKLKEVIWALLLGSSLGC
HHHHCCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCHHH
WFFFGILESYAIQQFISGALDVPLILNTQGGETAVQMLLSALPMGKLFLAAYLFIMIIFL
HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ASHMDAVAYCMAATSTRNLREGEDPNRMLRLFWCVVITLIPLSILFAGASLDTMKTTVVL
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
TALPFLLILLIEVYGFIRWIKQDYAHVPAHLIEQSTPQVMLPAESLPPATASMLVVETAA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEECCCCCCCCCHHEEEEEECC
PPASKHNQ
CCCCCCCC
>Mature Secondary Structure
MLLGLILVLYIAVSKYGNIRLGEGKPEYRTIPWLFMFICAGLGSSTLYWGVMEWAYYYQT
CHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHEEC
PGLNIAPKTPKALEYSVSYSFFHWGISAWATYALASLIMAYHFHVRKNKGLSLSGIISAI
CCCCCCCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH
TGVNPQGFWGRLVDLIFLIATIGALTISLVITAATFTGGLTALIGVPNNFAVQAGVMLVA
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHH
AVIFSLSSYIGIDHGMQRLSKMVGWGAFGFAVLVLLVGPTEFIINNTINSIGLTTQNFLQ
HHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHHHHCCHHHHHHCCHHHCCCCHHHHHH
MSLFTDPMGDGRFTRSWTVFYWLWWISYTPGVAMFVTRVSRGRKLKEVIWALLLGSSLGC
HHHHCCCCCCCCEEHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHCCCHHH
WFFFGILESYAIQQFISGALDVPLILNTQGGETAVQMLLSALPMGKLFLAAYLFIMIIFL
HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ASHMDAVAYCMAATSTRNLREGEDPNRMLRLFWCVVITLIPLSILFAGASLDTMKTTVVL
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
TALPFLLILLIEVYGFIRWIKQDYAHVPAHLIEQSTPQVMLPAESLPPATASMLVVETAA
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCEEECCCCCCCCCHHEEEEEECC
PPASKHNQ
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]