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The map label for this gene is ynfA [C]

Identifier: 161723131

GI number: 161723131

Start: 3207454

End: 3207786

Strand: Reverse

Name: ynfA [C]

Synonym: BTH_I2792

Alternate gene names: 161723131

Gene position: 3207786-3207454 (Counterclockwise)

Preceding gene: 83720799

Following gene: 83720134

Centisome position: 84.21

GC content: 71.47

Gene sequence:

>333_bases
ATGCTCTCACTCGCGAAGATCGCCGCGCTGTTTGTCTTGACCGCCGTCGCCGAAATCGTCGGCTGCTATCTGCCGTGGCT
CGTGCTGAAGGCGGGCAAGCCGGTTTGGCTACTCGCGCCCGCTGCGCTGTCGCTCGCGCTCTTCGCATGGCTCCTGACGC
TGCATCCGGCCGCCGCCGCGCGCACCTACGCGGCGTACGGCGGCGTGTACATCGCCGTCGCGCTCGCGTGGCTGCGGATC
GTCGACGGCGTGCCGCTGTCGCGCTGGGATGCGGCGGGCGCGGCGCTCGCGCTCGCAGGGATGTCGGTGATCGCGCTCCA
GCCGCGCGGGTGA

Upstream 100 bases:

>100_bases
GCCGCTCGAGCGCCGGTTTTCGGGCGTCGCGTGGGGTATGATCGCGCCGATTGCCGCGGCGTCGCGCGGCGTTTCCGAGG
CGCGTCCCGCGCGCTCCGAC

Downstream 100 bases:

>100_bases
CATCGGCGCGATCAGGCGATGCGCGCCGCGCCGCCTGCGTGGCGCGGCGGCAATGCGGGCGGCGGCGCGCGGCGATCGTG
GCCGGCGGGTGGCGCGAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 110; Mature: 110

Protein sequence:

>110_residues
MLSLAKIAALFVLTAVAEIVGCYLPWLVLKAGKPVWLLAPAALSLALFAWLLTLHPAAAARTYAAYGGVYIAVALAWLRI
VDGVPLSRWDAAGAALALAGMSVIALQPRG

Sequences:

>Translated_110_residues
MLSLAKIAALFVLTAVAEIVGCYLPWLVLKAGKPVWLLAPAALSLALFAWLLTLHPAAAARTYAAYGGVYIAVALAWLRI
VDGVPLSRWDAAGAALALAGMSVIALQPRG
>Mature_110_residues
MLSLAKIAALFVLTAVAEIVGCYLPWLVLKAGKPVWLLAPAALSLALFAWLLTLHPAAAARTYAAYGGVYIAVALAWLRI
VDGVPLSRWDAAGAALALAGMSVIALQPRG

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family [H]

Homologues:

Organism=Escherichia coli, GI1787865, Length=101, Percent_Identity=60.3960396039604, Blast_Score=123, Evalue=2e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003844 [H]

Pfam domain/function: PF02694 UPF0060 [H]

EC number: NA

Molecular weight: Translated: 11439; Mature: 11439

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSLAKIAALFVLTAVAEIVGCYLPWLVLKAGKPVWLLAPAALSLALFAWLLTLHPAAAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCHHHHH
RTYAAYGGVYIAVALAWLRIVDGVPLSRWDAAGAALALAGMSVIALQPRG
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHEEECCCC
>Mature Secondary Structure
MLSLAKIAALFVLTAVAEIVGCYLPWLVLKAGKPVWLLAPAALSLALFAWLLTLHPAAAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHCHHHHH
RTYAAYGGVYIAVALAWLRIVDGVPLSRWDAAGAALALAGMSVIALQPRG
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA