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The map label for this gene is avtA

Identifier: 161621780

GI number: 161621780

Start: 179798

End: 181051

Strand: Direct

Name: avtA

Synonym: LIC10150

Alternate gene names: 161621780

Gene position: 179798-181051 (Clockwise)

Preceding gene: 45656057

Following gene: 45656059

Centisome position: 4.2

GC content: 37.16

Gene sequence:

>1254_bases
ATGCAATACTCAATTTTCGGTCAGAAATTTTTAAAACAAACCGGAATCGGGCAATTGATGGACGATTTAAGTAATCCTCC
TCCGGGCTCTTGTTTGTTAGGTGGAGGAAATCCGGCTTTTATTCCGGAATTAATCGAAATTTGGAGAGAGATCGTATCAA
AACAAATCGAGTCGGGAAGTATAGATAAAATTTTAGGAGGTTACGAATCTCCTTCTGGAATTTTAGAACTTAGAGAAACG
GTCGCTTCCATTTTATCGGATGAATCCGGAACAAAAATTTCTAAAGACCAAATTGCAATTACGAACGGAAGCCAGAACGC
TTTCTATTTCTTATTAAATTTTTTCTCTGGAAATTTCGGTAATGACCAAAGAAAAAAAATCCTTTTTCCTATTCTTCCAG
AATACATCGGTTATACGGATCAAACCTTGGAGCCGGATTCTTTTTTATCTTTTGTACCTGAAATTCGAGAAATAGAAGAT
CGATATTATAAATACTTTATATCTTTGGAAAATTTCGATTCCATTCCAAGTTGGAAAAAGGAGGCGGGTTGTATTTGCGT
TTCTCGGCCCACAAATCCAACGGGCAATGTGATTACGGATCAAGAACTTGAGTTTTTAATTGAAAGAGCAAATAACGTAG
GAATTCCTTTACTGGTCGACAATGCCTACGGATTTCCGTTTCCCAATGTTGTTTTTGGAAAAAATTCTTTCATTCATAGA
TCTGGAATGATTCAGGGTTTTAGTCTTTCTAAGTTGGGTCTTCCTGGAGTTCGGACTGGCTTTGTAGTGGGCGATTCGGA
AACAATTACTTTGCTGCATAGAGCCAATTCGGTTATCAATTTGACGAGCGCCAATCCGGGACAATTTATTGCATTGGACC
TTTTTCGCTCTGGGCGTTGGAAAGAGTTGTGTGAGAAAATAATCTTACCTTTTTATCTAAAAAAATCGATTTTTACTCAG
GAGGCGATCTTAAACAATTGGAGTTCTCAGATTGACTATAAAATTCATCAAAGTGAAGGCGCTTTTTTTCTTTGGGTTTG
GGTTAGGAATTTATCTCTATCCGTTAGCGATCTTTATCCGATTTTAAAGGAAGCAGGAGTTATCGTCGTTCCCGGTAAAA
CTTTTTTTCCAGGAACAGACTCAAATTGGTCTCATAGAGAAGAATGTTTTCGATTGAGTTTTGCCAGAGAAGATAAAGAG
ATCGAAGAGGGAGTCCTGAAAATTGGAAAGGTATTGGAAAAATTTTTGAAATAA

Upstream 100 bases:

>100_bases
AAAGTATTTTTGCTATAAAGTTAAAAAAGAATCTGCAAAATTTTCCTTTAAGATTAGATTCTAGTTTCTATATCTTACTT
AGAAAGAAATTTTGTACAAT

Downstream 100 bases:

>100_bases
ATGATTTTATCCAACTATTTAAGTGGAATACTGGACAAGTAAAAATGTTCAACTAAAAAGAACCGTACTGTAGAATTGAT
AGGAAATATGGAAAGCACTG

Product: valine--pyruvate transaminase

Products: NA

Alternate protein names: Alanine--valine transaminase; Transaminase C [H]

Number of amino acids: Translated: 417; Mature: 417

Protein sequence:

>417_residues
MQYSIFGQKFLKQTGIGQLMDDLSNPPPGSCLLGGGNPAFIPELIEIWREIVSKQIESGSIDKILGGYESPSGILELRET
VASILSDESGTKISKDQIAITNGSQNAFYFLLNFFSGNFGNDQRKKILFPILPEYIGYTDQTLEPDSFLSFVPEIREIED
RYYKYFISLENFDSIPSWKKEAGCICVSRPTNPTGNVITDQELEFLIERANNVGIPLLVDNAYGFPFPNVVFGKNSFIHR
SGMIQGFSLSKLGLPGVRTGFVVGDSETITLLHRANSVINLTSANPGQFIALDLFRSGRWKELCEKIILPFYLKKSIFTQ
EAILNNWSSQIDYKIHQSEGAFFLWVWVRNLSLSVSDLYPILKEAGVIVVPGKTFFPGTDSNWSHREECFRLSFAREDKE
IEEGVLKIGKVLEKFLK

Sequences:

>Translated_417_residues
MQYSIFGQKFLKQTGIGQLMDDLSNPPPGSCLLGGGNPAFIPELIEIWREIVSKQIESGSIDKILGGYESPSGILELRET
VASILSDESGTKISKDQIAITNGSQNAFYFLLNFFSGNFGNDQRKKILFPILPEYIGYTDQTLEPDSFLSFVPEIREIED
RYYKYFISLENFDSIPSWKKEAGCICVSRPTNPTGNVITDQELEFLIERANNVGIPLLVDNAYGFPFPNVVFGKNSFIHR
SGMIQGFSLSKLGLPGVRTGFVVGDSETITLLHRANSVINLTSANPGQFIALDLFRSGRWKELCEKIILPFYLKKSIFTQ
EAILNNWSSQIDYKIHQSEGAFFLWVWVRNLSLSVSDLYPILKEAGVIVVPGKTFFPGTDSNWSHREECFRLSFAREDKE
IEEGVLKIGKVLEKFLK
>Mature_417_residues
MQYSIFGQKFLKQTGIGQLMDDLSNPPPGSCLLGGGNPAFIPELIEIWREIVSKQIESGSIDKILGGYESPSGILELRET
VASILSDESGTKISKDQIAITNGSQNAFYFLLNFFSGNFGNDQRKKILFPILPEYIGYTDQTLEPDSFLSFVPEIREIED
RYYKYFISLENFDSIPSWKKEAGCICVSRPTNPTGNVITDQELEFLIERANNVGIPLLVDNAYGFPFPNVVFGKNSFIHR
SGMIQGFSLSKLGLPGVRTGFVVGDSETITLLHRANSVINLTSANPGQFIALDLFRSGRWKELCEKIILPFYLKKSIFTQ
EAILNNWSSQIDYKIHQSEGAFFLWVWVRNLSLSVSDLYPILKEAGVIVVPGKTFFPGTDSNWSHREECFRLSFAREDKE
IEEGVLKIGKVLEKFLK

Specific function: Unknown

COG id: COG3977

COG function: function code E; Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]

Homologues:

Organism=Escherichia coli, GI48994949, Length=418, Percent_Identity=40.4306220095694, Blast_Score=329, Evalue=2e-91,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF00155 Aminotran_1_2 [H]

EC number: =2.6.1.66 [H]

Molecular weight: Translated: 46926; Mature: 46926

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQYSIFGQKFLKQTGIGQLMDDLSNPPPGSCLLGGGNPAFIPELIEIWREIVSKQIESGS
CCCCHHHHHHHHHCCHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCC
IDKILGGYESPSGILELRETVASILSDESGTKISKDQIAITNGSQNAFYFLLNFFSGNFG
HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCEEEEECCCCCEEEEEEEHHCCCCC
NDQRKKILFPILPEYIGYTDQTLEPDSFLSFVPEIREIEDRYYKYFISLENFDSIPSWKK
CCCHHEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHH
EAGCICVSRPTNPTGNVITDQELEFLIERANNVGIPLLVDNAYGFPFPNVVFGKNSFIHR
CCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCCCEEEC
SGMIQGFSLSKLGLPGVRTGFVVGDSETITLLHRANSVINLTSANPGQFIALDLFRSGRW
CCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCEEEEECCCCCCEEEEEEHHCCCH
KELCEKIILPFYLKKSIFTQEAILNNWSSQIDYKIHQSEGAFFLWVWVRNLSLSVSDLYP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCEEEEECCCCCEEEEEEEHHCCCCHHHHHH
ILKEAGVIVVPGKTFFPGTDSNWSHREECFRLSFAREDKEIEEGVLKIGKVLEKFLK
HHHHCCEEEECCCEECCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MQYSIFGQKFLKQTGIGQLMDDLSNPPPGSCLLGGGNPAFIPELIEIWREIVSKQIESGS
CCCCHHHHHHHHHCCHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCC
IDKILGGYESPSGILELRETVASILSDESGTKISKDQIAITNGSQNAFYFLLNFFSGNFG
HHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEECCCEEEEECCCCCEEEEEEEHHCCCCC
NDQRKKILFPILPEYIGYTDQTLEPDSFLSFVPEIREIEDRYYKYFISLENFDSIPSWKK
CCCHHEEEHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCHH
EAGCICVSRPTNPTGNVITDQELEFLIERANNVGIPLLVDNAYGFPFPNVVFGKNSFIHR
CCCEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEECCCCEEEC
SGMIQGFSLSKLGLPGVRTGFVVGDSETITLLHRANSVINLTSANPGQFIALDLFRSGRW
CCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCEEEEECCCCCCEEEEEEHHCCCH
KELCEKIILPFYLKKSIFTQEAILNNWSSQIDYKIHQSEGAFFLWVWVRNLSLSVSDLYP
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCEEEEECCCCCEEEEEEEHHCCCCHHHHHH
ILKEAGVIVVPGKTFFPGTDSNWSHREECFRLSFAREDKEIEEGVLKIGKVLEKFLK
HHHHCCEEEECCCEECCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2825136; 8041620; 9278503 [H]