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The map label for this gene is smf [H]

Identifier: 161526294

GI number: 161526294

Start: 3412392

End: 3413669

Strand: Direct

Name: smf [H]

Synonym: Bmul_3125

Alternate gene names: 161526294

Gene position: 3412392-3413669 (Clockwise)

Preceding gene: 161526280

Following gene: 161526295

Centisome position: 98.95

GC content: 75.2

Gene sequence:

>1278_bases
ATGTCGCCGCAAGCGCTGACGCGTGCCGGGCTGCGCGCGTGGCTGCAGCTCGCGCACGCGCCGTCGCTGCCGCCGGCCGT
GCTGCGCGCACTGCTCGACGCATTCGGGTCGGCCGACGCACTGCTGCGCGCGCCGGACGATGCGATCGCCGCGGCGAGCA
GCCCGACCGCCGTGCGCGCCGTGCGCGCGAGCGAGCGCGCCGATCTCGACGCGCGCACCGATGCCGCACTCGCGTGGCTC
GACGTGCGCGGCAACGCGATCGTCACGCTCGACGATCCGGCCTATCCGCCGCGCCTGCGCGATCTGCACGATCCGCCGCC
GCTGCTATATGTAAAGGGGCGGCTCGACCTGCTGCACACGCGCGGCATCGCGGTGGTCGGCAGCCGGCATGCGACGCCGC
AGGGGCTCGCGGATGCCGCGCGCTTCGCGCGTGCGTTGTCCGATGCGGGGCTCACGGTCGTGTCGGGGCTCGCGCTCGGC
ATCGATGCAGCGGCCCACCAGGGCGCGCTCGACGGCCCGTCAAGCACCATCGCGGTAATCGCGACGGGCGCCGACCTCGT
CTATCCGGCGCGCCACCATGCGCTCGCGCATGCGATCGCCGCGCGCGGTGCGATCGTGTCCGAATGGCCGCTCGGCACGC
CGGCCCGCGCGTCGCACTTTCCGCAGCGCAACCGTCTGATCGCGGCGCTCGCGCTCGGCGCGCTCGTCGTCGAAGCCGCG
CCGCGCTCCGGCTCGCTCATTACCGCGCGACTGGCGAACGAACTGGGCCGCGACGTATTCGCGATGCCGGGCTCGATTCA
CGCGCCGCTCGCGCAGGGCTGCCACGCGCTGATCCGCGACGGCGCGAAGCTCACCGCGACGCCGCTCGACATCCTCGAGG
AATACGGGCTCGGCGAGCCTGCGGCGCGCGGCGCGCACACGTGCGCCGAACCGGCCGCCGGCGATGCGCGCGCGAACGTC
GGCGTGGCGGACCTCAACGACCTGACCGCTGCCGCAGCGCCGCCGCCCGCCACCGCGCCGGACGCCGCCACGCCGGGTGC
GGCCCACGAACTGCCCGCGTGCCCGGCCGAGCAGGCCGTGCTGACGGCGCTCGGATATGGCCCCGTCACATACGAATGGC
TCGCCGAGCGCTGCGGGCTGCCGGACGACACGCTGCACCGCGCGCTGCTCGCGCTCGAACTGGCCGGTCGCGTCGCGCCG
CTGGCCGGCGGCCGCTACGGTCGGCTCGACGGGCCCCCCAACCCTGCTGCACGCGGCGTGCTACATTCCCCCGCATAG

Upstream 100 bases:

>100_bases
CCGCGCGCCTGCGCACGCGGCCTCGTCGAGTATTTCGGATGATGAAAATTTTATCATGGCGACACGCCGTTCGCTGGCCG
CTTCCGTCGAGGGAAATCTC

Downstream 100 bases:

>100_bases
CGGCGGCCGTGCCGCCGGCGACATTCGAAGGAAACTCATGCCCGCGCTGAATCTCGACACCGACGCCGATCGGATCGCCG
AGCGTCTCGCCGATCCCGCC

Product: DNA protecting protein DprA

Products: NA

Alternate protein names: DNA-processing chain A [H]

Number of amino acids: Translated: 425; Mature: 424

Protein sequence:

>425_residues
MSPQALTRAGLRAWLQLAHAPSLPPAVLRALLDAFGSADALLRAPDDAIAAASSPTAVRAVRASERADLDARTDAALAWL
DVRGNAIVTLDDPAYPPRLRDLHDPPPLLYVKGRLDLLHTRGIAVVGSRHATPQGLADAARFARALSDAGLTVVSGLALG
IDAAAHQGALDGPSSTIAVIATGADLVYPARHHALAHAIAARGAIVSEWPLGTPARASHFPQRNRLIAALALGALVVEAA
PRSGSLITARLANELGRDVFAMPGSIHAPLAQGCHALIRDGAKLTATPLDILEEYGLGEPAARGAHTCAEPAAGDARANV
GVADLNDLTAAAAPPPATAPDAATPGAAHELPACPAEQAVLTALGYGPVTYEWLAERCGLPDDTLHRALLALELAGRVAP
LAGGRYGRLDGPPNPAARGVLHSPA

Sequences:

>Translated_425_residues
MSPQALTRAGLRAWLQLAHAPSLPPAVLRALLDAFGSADALLRAPDDAIAAASSPTAVRAVRASERADLDARTDAALAWL
DVRGNAIVTLDDPAYPPRLRDLHDPPPLLYVKGRLDLLHTRGIAVVGSRHATPQGLADAARFARALSDAGLTVVSGLALG
IDAAAHQGALDGPSSTIAVIATGADLVYPARHHALAHAIAARGAIVSEWPLGTPARASHFPQRNRLIAALALGALVVEAA
PRSGSLITARLANELGRDVFAMPGSIHAPLAQGCHALIRDGAKLTATPLDILEEYGLGEPAARGAHTCAEPAAGDARANV
GVADLNDLTAAAAPPPATAPDAATPGAAHELPACPAEQAVLTALGYGPVTYEWLAERCGLPDDTLHRALLALELAGRVAP
LAGGRYGRLDGPPNPAARGVLHSPA
>Mature_424_residues
SPQALTRAGLRAWLQLAHAPSLPPAVLRALLDAFGSADALLRAPDDAIAAASSPTAVRAVRASERADLDARTDAALAWLD
VRGNAIVTLDDPAYPPRLRDLHDPPPLLYVKGRLDLLHTRGIAVVGSRHATPQGLADAARFARALSDAGLTVVSGLALGI
DAAAHQGALDGPSSTIAVIATGADLVYPARHHALAHAIAARGAIVSEWPLGTPARASHFPQRNRLIAALALGALVVEAAP
RSGSLITARLANELGRDVFAMPGSIHAPLAQGCHALIRDGAKLTATPLDILEEYGLGEPAARGAHTCAEPAAGDARANVG
VADLNDLTAAAAPPPATAPDAATPGAAHELPACPAEQAVLTALGYGPVTYEWLAERCGLPDDTLHRALLALELAGRVAPL
AGGRYGRLDGPPNPAARGVLHSPA

Specific function: Essential for efficient chromosomal DNA transformation but not required for plasmid transformation [H]

COG id: COG0758

COG function: function code LU; Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the smf family [H]

Homologues:

Organism=Escherichia coli, GI48994932, Length=338, Percent_Identity=38.1656804733728, Blast_Score=177, Evalue=1e-45,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003488 [H]

Pfam domain/function: PF02481 DNA_processg_A [H]

EC number: NA

Molecular weight: Translated: 43405; Mature: 43274

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPQALTRAGLRAWLQLAHAPSLPPAVLRALLDAFGSADALLRAPDDAIAAASSPTAVRA
CCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEECCCHHHHCCCCCHHHHH
VRASERADLDARTDAALAWLDVRGNAIVTLDDPAYPPRLRDLHDPPPLLYVKGRLDLLHT
HHHHHHCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEEECCCEEEEEE
RGIAVVGSRHATPQGLADAARFARALSDAGLTVVSGLALGIDAAAHQGALDGPSSTIAVI
CCEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
ATGADLVYPARHHALAHAIAARGAIVSEWPLGTPARASHFPQRNRLIAALALGALVVEAA
EECCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCC
PRSGSLITARLANELGRDVFAMPGSIHAPLAQGCHALIRDGAKLTATPLDILEEYGLGEP
CCCCCEEHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCEECCHHHHHHHCCCCCC
AARGAHTCAEPAAGDARANVGVADLNDLTAAAAPPPATAPDAATPGAAHELPACPAEQAV
HHCCCCHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LTALGYGPVTYEWLAERCGLPDDTLHRALLALELAGRVAPLAGGRYGRLDGPPNPAARGV
HHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCC
LHSPA
CCCCC
>Mature Secondary Structure 
SPQALTRAGLRAWLQLAHAPSLPPAVLRALLDAFGSADALLRAPDDAIAAASSPTAVRA
CCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEECCCHHHHCCCCCHHHHH
VRASERADLDARTDAALAWLDVRGNAIVTLDDPAYPPRLRDLHDPPPLLYVKGRLDLLHT
HHHHHHCCCCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCCCCCCCEEEECCCEEEEEE
RGIAVVGSRHATPQGLADAARFARALSDAGLTVVSGLALGIDAAAHQGALDGPSSTIAVI
CCEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEE
ATGADLVYPARHHALAHAIAARGAIVSEWPLGTPARASHFPQRNRLIAALALGALVVEAA
EECCCCCCCHHHHHHHHHHHHCCCEEECCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHCC
PRSGSLITARLANELGRDVFAMPGSIHAPLAQGCHALIRDGAKLTATPLDILEEYGLGEP
CCCCCEEHHHHHHHHCCCEEECCCCCCCHHHHHHHHHHHCCCCEECCHHHHHHHCCCCCC
AARGAHTCAEPAAGDARANVGVADLNDLTAAAAPPPATAPDAATPGAAHELPACPAEQAV
HHCCCCHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
LTALGYGPVTYEWLAERCGLPDDTLHRALLALELAGRVAPLAGGRYGRLDGPPNPAARGV
HHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHCCC
LHSPA
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7768823; 7542800 [H]