Click here to switch to the map view.

The map label for this gene is queD [H]

Identifier: 161526283

GI number: 161526283

Start: 3401229

End: 3401681

Strand: Reverse

Name: queD [H]

Synonym: Bmul_3114

Alternate gene names: 161526283

Gene position: 3401681-3401229 (Counterclockwise)

Preceding gene: 161526284

Following gene: 161526282

Centisome position: 98.64

GC content: 64.9

Gene sequence:

>453_bases
GTGCTGATTACCCGAAAACTCGAATTCGACGCGGGCCACCGCATTCCCGATCACCGCAGCCAGTGCCGGAACCTGCACGG
CCATCGCTATGTGCTCGAAATCACGCTGCGCGGCGATCTCGTCGATACCGAGGGGGCGCCCGATCGCGGCATGGTGATGG
ATTTCGCCGACGTGAAGGCGCTCGCGGTCGAGCACCTCGTCAGCAAGTGGGACCACGCGTTCCTCGTCTACGCGCGCGAC
GAAGTCGTGCGTTCGTTCCTCGAGCAGATGGCCGATCACAAGACGGTCGTGCTCGACCGCATTCCGACCGTCGAAAATCT
CGCCGCGATCGCGTTCGACATCCTCGCGAGCGTGTACGACGCGCATTACGGCGTGAACCTGCGCCTCGAGCGCGTGCGGC
TCTACGAGACGCCGAACTGCTGGGCCGACGTCGAGCGCGACGCAGGCCGCTGA

Upstream 100 bases:

>100_bases
AAGCTGGCGATCGACTGGTGCAAGCGGCATCCGCAGTGGCGCCTGTCGATGCAGACGCACAAATATCTGAACATTCCCTG
AGCCACGGCTTTTTGACATC

Downstream 100 bases:

>100_bases
TCCGCGCCGCATCGGGCCGCCGGCACGCTGGCCGGCGCGTCCGGCCGCCGCAGCGCGCGCGGCGCCTCCCTCCGCGTTTT
CCTACCCGCATTCCGCCCGG

Product: queuosine biosynthesis protein QueD

Products: NA

Alternate protein names: CPH4 synthase; Queuosine biosynthesis protein queD [H]

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MLITRKLEFDAGHRIPDHRSQCRNLHGHRYVLEITLRGDLVDTEGAPDRGMVMDFADVKALAVEHLVSKWDHAFLVYARD
EVVRSFLEQMADHKTVVLDRIPTVENLAAIAFDILASVYDAHYGVNLRLERVRLYETPNCWADVERDAGR

Sequences:

>Translated_150_residues
MLITRKLEFDAGHRIPDHRSQCRNLHGHRYVLEITLRGDLVDTEGAPDRGMVMDFADVKALAVEHLVSKWDHAFLVYARD
EVVRSFLEQMADHKTVVLDRIPTVENLAAIAFDILASVYDAHYGVNLRLERVRLYETPNCWADVERDAGR
>Mature_150_residues
MLITRKLEFDAGHRIPDHRSQCRNLHGHRYVLEITLRGDLVDTEGAPDRGMVMDFADVKALAVEHLVSKWDHAFLVYARD
EVVRSFLEQMADHKTVVLDRIPTVENLAAIAFDILASVYDAHYGVNLRLERVRLYETPNCWADVERDAGR

Specific function: Catalyzes the conversion of 7,8-dihydroneopterin triphosphate (H2NTP) to 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) and acetaldehyde [H]

COG id: COG0720

COG function: function code H; 6-pyruvoyl-tetrahydropterin synthase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PTPS family. QueD subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007115 [H]

Pfam domain/function: PF01242 PTPS [H]

EC number: NA

Molecular weight: Translated: 17241; Mature: 17241

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLITRKLEFDAGHRIPDHRSQCRNLHGHRYVLEITLRGDLVDTEGAPDRGMVMDFADVKA
CEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCEECCCCCCCCCEEEEHHHHHH
LAVEHLVSKWDHAFLVYARDEVVRSFLEQMADHKTVVLDRIPTVENLAAIAFDILASVYD
HHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHH
AHYGVNLRLERVRLYETPNCWADVERDAGR
HCCCCCEEEEEEEEEECCCCHHCCCCCCCC
>Mature Secondary Structure
MLITRKLEFDAGHRIPDHRSQCRNLHGHRYVLEITLRGDLVDTEGAPDRGMVMDFADVKA
CEEEEECCCCCCCCCCCHHHHHHCCCCCEEEEEEEEECCEECCCCCCCCCEEEEHHHHHH
LAVEHLVSKWDHAFLVYARDEVVRSFLEQMADHKTVVLDRIPTVENLAAIAFDILASVYD
HHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHHH
AHYGVNLRLERVRLYETPNCWADVERDAGR
HCCCCCEEEEEEEEEECCCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]