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The map label for this gene is slmA [H]

Identifier: 161526263

GI number: 161526263

Start: 3376375

End: 3377040

Strand: Direct

Name: slmA [H]

Synonym: Bmul_3094

Alternate gene names: 161526263

Gene position: 3376375-3377040 (Clockwise)

Preceding gene: 161526262

Following gene: 161526264

Centisome position: 97.91

GC content: 69.97

Gene sequence:

>666_bases
ATGCAGCCGACTCACCCGCAGGACCACCGCGTAACGGACGACCAGGCCACACCCGCGCGAGCGCGCGCCCGACCGAAGCC
GGGCGAGCGCCGCATGCTGATCCTGCAGACGCTCGCGTCGATGCTCGAGGCGCCGAAGCGCGAGAAGATCACGACGGCCG
CGCTCGCGGCGCGGCTCGACGTGTCGGAGGCGGCGCTCTACCGGCATTTCGCGAGCAAGGCCCAGATGTACGACGGGCTG
ATCGAATTCATCGAAGAAACGTTCTTCGGGCTGATCAACCAGATCGCGGCGAAGGAGCCCGACGGCGTGCTCCAGGCGCG
CGCGATCGGCATGATGCTGCTCAATTTCGCGGCGAAGAACCCCGGCATGACGCGCGTGCTGACCGGCGAGGCGCTCGTCG
GCGAGCACGAGCGGCTCGCCGAGCGCATCGACCGCATGCTCGAGCGGATCGAGGCCTCGGTCCGGCAGTGCCTGCGCGTC
GCGCTGGCCGAACGCACGGCGGCCGCCGGCAGCGGCGCACCGCTTCCGGCCGGCTACGATCCGGCCGTTCGCGCGAATCT
GCTGGTCGGCTACGCGGTCGGCGCGTGGCAGCGCTACACGCGCAGCGGCTTCACGAAACCGCCGGGCGAACTGGCCGAGC
AGAAGCTCCAATTGATCCTGCAGTAG

Upstream 100 bases:

>100_bases
TGCCCGGCCATCTGCCGAGCACCGGGCGCCCGCATTATGTCGACCGACGGATTCGTTCGCTAAAATCGCTCCGACTGGGC
ACTCGATCGGGGCGACAAAA

Downstream 100 bases:

>100_bases
CGCTTCCTGCGCGTCGCGATTAGCGGCCGCCCACCTCACACCCCACCCTACGCACGTCGAACAAGTCCGACGCCGGCGCG
TTGCGGCCTGAGTCGCGCGT

Product: nucleoid occlusion protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 221; Mature: 221

Protein sequence:

>221_residues
MQPTHPQDHRVTDDQATPARARARPKPGERRMLILQTLASMLEAPKREKITTAALAARLDVSEAALYRHFASKAQMYDGL
IEFIEETFFGLINQIAAKEPDGVLQARAIGMMLLNFAAKNPGMTRVLTGEALVGEHERLAERIDRMLERIEASVRQCLRV
ALAERTAAAGSGAPLPAGYDPAVRANLLVGYAVGAWQRYTRSGFTKPPGELAEQKLQLILQ

Sequences:

>Translated_221_residues
MQPTHPQDHRVTDDQATPARARARPKPGERRMLILQTLASMLEAPKREKITTAALAARLDVSEAALYRHFASKAQMYDGL
IEFIEETFFGLINQIAAKEPDGVLQARAIGMMLLNFAAKNPGMTRVLTGEALVGEHERLAERIDRMLERIEASVRQCLRV
ALAERTAAAGSGAPLPAGYDPAVRANLLVGYAVGAWQRYTRSGFTKPPGELAEQKLQLILQ
>Mature_221_residues
MQPTHPQDHRVTDDQATPARARARPKPGERRMLILQTLASMLEAPKREKITTAALAARLDVSEAALYRHFASKAQMYDGL
IEFIEETFFGLINQIAAKEPDGVLQARAIGMMLLNFAAKNPGMTRVLTGEALVGEHERLAERIDRMLERIEASVRQCLRV
ALAERTAAAGSGAPLPAGYDPAVRANLLVGYAVGAWQRYTRSGFTKPPGELAEQKLQLILQ

Specific function: Required for nucleoid occlusion (NO) phenomenon, which cooperates in the proper positioning of the ftsZ/septal ring at midcell during cell division [H]

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasm, nucleoid [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH tetR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082302, Length=191, Percent_Identity=43.979057591623, Blast_Score=132, Evalue=2e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR011075
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 24313; Mature: 24313

Theoretical pI: Translated: 9.72; Mature: 9.72

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPTHPQDHRVTDDQATPARARARPKPGERRMLILQTLASMLEAPKREKITTAALAARLD
CCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VSEAALYRHFASKAQMYDGLIEFIEETFFGLINQIAAKEPDGVLQARAIGMMLLNFAAKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
PGMTRVLTGEALVGEHERLAERIDRMLERIEASVRQCLRVALAERTAAAGSGAPLPAGYD
CCCEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PAVRANLLVGYAVGAWQRYTRSGFTKPPGELAEQKLQLILQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MQPTHPQDHRVTDDQATPARARARPKPGERRMLILQTLASMLEAPKREKITTAALAARLD
CCCCCCCCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
VSEAALYRHFASKAQMYDGLIEFIEETFFGLINQIAAKEPDGVLQARAIGMMLLNFAAKN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC
PGMTRVLTGEALVGEHERLAERIDRMLERIEASVRQCLRVALAERTAAAGSGAPLPAGYD
CCCEEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
PAVRANLLVGYAVGAWQRYTRSGFTKPPGELAEQKLQLILQ
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA