| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is 161526142
Identifier: 161526142
GI number: 161526142
Start: 3254579
End: 3255322
Strand: Direct
Name: 161526142
Synonym: Bmul_2973
Alternate gene names: NA
Gene position: 3254579-3255322 (Clockwise)
Preceding gene: 161526139
Following gene: 161526143
Centisome position: 94.38
GC content: 78.63
Gene sequence:
>744_bases ATGACCGTTTCAGCCGATACGCCGGCCGCGCGCGTGGCGCTCGTCGCCGGCGCGTTCGACCGCCGCGCCGATCCCGCGCC GCTCGGGCGCGCGCTCGCTGCGGCGTTCGCGCGGCGCGGCTGGGACGTCGCGCTGCAGTGCGGCCCCGGCGCCGCGCGCG CAGACGCCGACGCGGCCGCCGCCGACGTCGCGGCGCTCGGCCGTCGCGCCGCCGTGCTCGACGCCGATCTGGCCCTGGAG GCCGATGCCGCGACGCTGATCGCCGCATGCGGCGCCGCGCTCGGCCGGCCCGCATGCGCGGTATTCGTCAGCGCGTGCGC GGGTGCGGACGATGCGCAGACGATCGACGGCGCGACGCTCGCCGCCGCGCTCGCGCGCAACGTGACGGCGCCGCTCGCGC TGGCACGCGCGCTCGCCGACGCGACGCCCGACGCCGCGCGCGACGACGAAGCGCTGCGCGCCTGCGCGATCCACGTGCTG GATCAGGCACTGTTTCACCCGGCGCCCGCGCAGCTGTCGCATGCGCTGATGCAGGCCGCGCTGAGCCGCGCGACGTCGGC GCTCGCGCTCGCGCTCGCGCCGAAGGTGCGCGTCGCGGCGCTGGTGCGCGGCCGCGCGCCGCATGCGGACGACATCGCGG CGGCCGCCTGCTATCTCGCGAACGCGCCCGGCGTGACGGGCGCGACGCTGACCGTCGACGGCGGCGAGCACCTCGTGCCG CCGGCGGACGGCCCGAATGAATGA
Upstream 100 bases:
>100_bases CAGTTGCGCGGCGAGCGTTTCGGACTGCGCGAGCGCATCGGGGCCGGGAGCAGGTAAACTAGCGGGTTCGTGAGCTTTCG GGTTCATCCCGGCATTGTAA
Downstream 100 bases:
>100_bases ACCGCGCGGGCGTGCGGCATCGCGCCGCCGCCCGCGCCGCTTTGCGTGTGCGCACGCCAATTTGACTGGGACGACCATGT TTTCCGCTCTCCTGCACCCC
Product: short-chain dehydrogenase/reductase SDR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 246
Protein sequence:
>247_residues MTVSADTPAARVALVAGAFDRRADPAPLGRALAAAFARRGWDVALQCGPGAARADADAAAADVAALGRRAAVLDADLALE ADAATLIAACGAALGRPACAVFVSACAGADDAQTIDGATLAAALARNVTAPLALARALADATPDAARDDEALRACAIHVL DQALFHPAPAQLSHALMQAALSRATSALALALAPKVRVAALVRGRAPHADDIAAAACYLANAPGVTGATLTVDGGEHLVP PADGPNE
Sequences:
>Translated_247_residues MTVSADTPAARVALVAGAFDRRADPAPLGRALAAAFARRGWDVALQCGPGAARADADAAAADVAALGRRAAVLDADLALE ADAATLIAACGAALGRPACAVFVSACAGADDAQTIDGATLAAALARNVTAPLALARALADATPDAARDDEALRACAIHVL DQALFHPAPAQLSHALMQAALSRATSALALALAPKVRVAALVRGRAPHADDIAAAACYLANAPGVTGATLTVDGGEHLVP PADGPNE >Mature_246_residues TVSADTPAARVALVAGAFDRRADPAPLGRALAAAFARRGWDVALQCGPGAARADADAAAADVAALGRRAAVLDADLALEA DAATLIAACGAALGRPACAVFVSACAGADDAQTIDGATLAAALARNVTAPLALARALADATPDAARDDEALRACAIHVLD QALFHPAPAQLSHALMQAALSRATSALALALAPKVRVAALVRGRAPHADDIAAAACYLANAPGVTGATLTVDGGEHLVPP ADGPNE
Specific function: Unknown
COG id: COG1028
COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24305; Mature: 24173
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVSADTPAARVALVAGAFDRRADPAPLGRALAAAFARRGWDVALQCGPGAARADADAAA CCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHH ADVAALGRRAAVLDADLALEADAATLIAACGAALGRPACAVFVSACAGADDAQTIDGATL HHHHHHCCHHHEECCCHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHH AAALARNVTAPLALARALADATPDAARDDEALRACAIHVLDQALFHPAPAQLSHALMQAA HHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LSRATSALALALAPKVRVAALVRGRAPHADDIAAAACYLANAPGVTGATLTVDGGEHLVP HHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCEECC PADGPNE CCCCCCC >Mature Secondary Structure TVSADTPAARVALVAGAFDRRADPAPLGRALAAAFARRGWDVALQCGPGAARADADAAA CCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHH ADVAALGRRAAVLDADLALEADAATLIAACGAALGRPACAVFVSACAGADDAQTIDGATL HHHHHHCCHHHEECCCHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHH AAALARNVTAPLALARALADATPDAARDDEALRACAIHVLDQALFHPAPAQLSHALMQAA HHHHHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH LSRATSALALALAPKVRVAALVRGRAPHADDIAAAACYLANAPGVTGATLTVDGGEHLVP HHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCEEEEECCCCEECC PADGPNE CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA