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The map label for this gene is clpV1 [H]

Identifier: 161526093

GI number: 161526093

Start: 3197707

End: 3200376

Strand: Reverse

Name: clpV1 [H]

Synonym: Bmul_2924

Alternate gene names: 161526093

Gene position: 3200376-3197707 (Counterclockwise)

Preceding gene: 161526094

Following gene: 161526092

Centisome position: 92.81

GC content: 68.16

Gene sequence:

>2670_bases
ATGAGCACGCCTCTGAAGACCCTCATCACGAAACTGAATCCGCTGTGCCGGCATGCGGCCGAGCGTGCGGCGAGCGCGTG
TCTCGCGCGCGGCCATTACGAGGTCGATCTGGAGCATCTGTTTCTCGCGCTGCTCGAGGAGCCGGCGGGCGACCTGTCGC
TCGCACTGCGCGCAAGCCGCATCGACGCGCATGCGTTGCGCGCCGATCTCGAGCGCGAGCTCACGCGCCTGAAGACCGGC
AACACGCGCACGCCCGTATTCTCCGTGCATCTGATCGCGCTGTTCGAGCAGGCGTGGCTGATCGCGTCGCTCGACTCGCA
GCTCGGCCGCATCCGCTCGGGCCACCTGCTGCTCGCGCTGCTCACGGCGCCGGACCTCGCGCAGTTCGCGCAGCGGATGT
CGGCGCGCTTTTCCGAAGTGAACGTGACCGATCTGAAGCACAAGTTCGACGAGATCACGGCCGGGTCCAGCGAAGCCGAG
CCGCATCGTGCGGACGCGGAGCACGGCGACGCCGCTGCGCCGGCCGAGGGCGGCGCGCCGGCAGCGGGCGCATCGAAGAC
GCCCGCGCTCGACACGTACACGACGAACCTCACACAGCGTGCACGCGACGGGAAGATCGACCCGGTGATCGGCCGCGAAG
CCGAGATCCGTCAGGCGATCGACATCCTGATGCGGCGCCGCCAGAACAATCCGATCATGACGGGCGAGGCCGGCGTCGGC
AAAACGGCCGTCGTCGAAGGGCTCGCGCTGCGCATCGCAGCCGACGACGTGCCGCCGCCGCTGCGCGGCGTCGCGCTGCA
CGTGCTCGACATGGGGCTGCTGCAGGCCGGCGCGAGCGTGAAGGGCGAGTTCGAGAACCGTCTGAAGAGCGTGATCGACG
AGGTCAAGAAGAGCCCGCATCCGATCATCCTGTTCATCGACGAGGCGCACACGATCATCGGCGCGGGCGGACAGGCCGGC
CAGAACGACGCGGCGAACCTGCTGAAGCCCGCGCTTGCGCGCGGCGAGCTGCGCACGATCGCGGCGACGACGTGGAGCGA
ATACAAGAAGTACTTCGAGAAGGATGCCGCGCTCGCGCGACGCTTCCAGGTGGTGAAGGTCGAGGAACCGAGCGAGTCGC
TGGCGGCCGCGATGCTGCGCGGCATGGCCGGACTGATGGAGAAGCACTTCAACGTGCGGATTCTCGACGACGCGATCACC
GAGGCCGTCCGGCTCTCGCATCGCTATATCAGCGGGCGGCAACTGCCGGACAAGGCGATCAGCGTGCTCGACACCGCGTG
CGCGAAGGTCGCGCTCGCGCACAGCGCGACGCCGGCCGCGATCGACGACACGAAAAAGCGCACCGAGCGCATCGACGCGG
AAATCGCGTCGCTCGAGCGTGATGCGGCAAGCGGCGCGGCGCACGACGAACGACTCGGCGAGCTGCGCGGCGCGCGCGAC
GCGGCGCTCGAACAGCTCGCGAAGGACGAAGCGCGCTACGAGGCGGAACGTGCGATCGTCGCCGAGATCACCGCGCTGCG
CGAGACGCTCGATCGCGCCCGCGCGCCGGCCGACGACGGCCAGCCGGTCGACGTGCAGGCCACGCGCGAGAAGCTCGCCG
AACGCGTCGCGGCGCTGCATGCACTGCAGGGCGGCGAGCCGATGGTGCCGCTGCAGGTCGACGGTCACGTGGTGGCCGAG
ATCGTCGCTGCGTGGACCGGCATTCCGCTCGGCCGGATGGTGAAGGACGAGATCGGCACCGTGCTCAATCTGAAGCCGCT
GCTCGCCGCGCGCGTGATCGGCCAGGACCATGCGCTCGAAGCGATCGCGCAACGCGTGCGCACCGCGTCGGCGAACCTCG
AGGATCCGAACAAGCCGCGTGGCGTGTTCATGTTCGTCGGGCCGTCGGGCGTCGGTAAGACCGAGACGGCGCTGGCGCTC
GCGGACATCCTCTACGGCGGCGAGCGCAAGATGATCACGATCAACATGAGCGAGTATCAGGAGGCGCACAGCGTGTCCGG
CCTGAAGGGTTCGCCGCCGGGCTACGTCGGTTACGGCGAAGGCGGCGTGCTGACCGAGGCTGTGCGGCGCAATCCGTATT
CGGTCGTGCTGCTCGACGAGGTCGAGAAAGCGCATCCGGACGTGCTCGAGATGTTCTTCCAGGTGTTCGACAAGGGCATG
ATGGACGACGCCGAAGGGCGCGAGATCGACTTCCGCAACACGCTGATCATCCTGACGTCGAACGTCGGTTCGGCCGCGGT
GATGCAGGCGTGCCTGAACAAGCCGGCCGAGGAACTGCCCGATCCCGATGCGCTCGCGGAAGCGCTGCGCCCGCAGCTGT
ACAAGGCGTTCAAGCCCGCTTTCCTCGGCCGGATGAAGGTGGTGCCGTACTACCCGATCTCCGACGACGTGCTCGCCGAG
ATCATCGAGCTGAAGCTCGAACGGATTCGCAGCCGCATCGAGGCGAACCACAAGGCCGCGTTCGAATGGGACGAATCGCT
CGTCGAAGCGGTCCTCGCGCGCTGTACCGAAGTCGACTCGGGCGCACGCAACGTCGACCACATCCTGAACGGCACGCTGC
TGCCGGAGATCGCGGGCCACGTGCTGGGCCGGATCGCCGACGGCGCGTCGATTGCGCGCATCGCGGTGCGCGCGGACGAC
GCCGGCGAGTTCGCATACACGGTCGAATGA

Upstream 100 bases:

>100_bases
GCGACGCCGACGAAGACCGGTCCGACGCGCGCTACGAGCTGCACGTGATTCACTGATACCGAACGACAACAAACACGCAA
ACGAACCTGAGATCGACGCC

Downstream 100 bases:

>100_bases
GCGCGCCCCTTTCGATGCATCAACGGATTTACTGAACCATGCCGATCAATCTGCCCGAGCTGCTGACGCCGATCAGCGAC
GCGTCGCCCACCGGCGACGA

Product: type VI secretion ATPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 889; Mature: 888

Protein sequence:

>889_residues
MSTPLKTLITKLNPLCRHAAERAASACLARGHYEVDLEHLFLALLEEPAGDLSLALRASRIDAHALRADLERELTRLKTG
NTRTPVFSVHLIALFEQAWLIASLDSQLGRIRSGHLLLALLTAPDLAQFAQRMSARFSEVNVTDLKHKFDEITAGSSEAE
PHRADAEHGDAAAPAEGGAPAAGASKTPALDTYTTNLTQRARDGKIDPVIGREAEIRQAIDILMRRRQNNPIMTGEAGVG
KTAVVEGLALRIAADDVPPPLRGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSPHPIILFIDEAHTIIGAGGQAG
QNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVVKVEEPSESLAAAMLRGMAGLMEKHFNVRILDDAIT
EAVRLSHRYISGRQLPDKAISVLDTACAKVALAHSATPAAIDDTKKRTERIDAEIASLERDAASGAAHDERLGELRGARD
AALEQLAKDEARYEAERAIVAEITALRETLDRARAPADDGQPVDVQATREKLAERVAALHALQGGEPMVPLQVDGHVVAE
IVAAWTGIPLGRMVKDEIGTVLNLKPLLAARVIGQDHALEAIAQRVRTASANLEDPNKPRGVFMFVGPSGVGKTETALAL
ADILYGGERKMITINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGM
MDDAEGREIDFRNTLIILTSNVGSAAVMQACLNKPAEELPDPDALAEALRPQLYKAFKPAFLGRMKVVPYYPISDDVLAE
IIELKLERIRSRIEANHKAAFEWDESLVEAVLARCTEVDSGARNVDHILNGTLLPEIAGHVLGRIADGASIARIAVRADD
AGEFAYTVE

Sequences:

>Translated_889_residues
MSTPLKTLITKLNPLCRHAAERAASACLARGHYEVDLEHLFLALLEEPAGDLSLALRASRIDAHALRADLERELTRLKTG
NTRTPVFSVHLIALFEQAWLIASLDSQLGRIRSGHLLLALLTAPDLAQFAQRMSARFSEVNVTDLKHKFDEITAGSSEAE
PHRADAEHGDAAAPAEGGAPAAGASKTPALDTYTTNLTQRARDGKIDPVIGREAEIRQAIDILMRRRQNNPIMTGEAGVG
KTAVVEGLALRIAADDVPPPLRGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSPHPIILFIDEAHTIIGAGGQAG
QNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVVKVEEPSESLAAAMLRGMAGLMEKHFNVRILDDAIT
EAVRLSHRYISGRQLPDKAISVLDTACAKVALAHSATPAAIDDTKKRTERIDAEIASLERDAASGAAHDERLGELRGARD
AALEQLAKDEARYEAERAIVAEITALRETLDRARAPADDGQPVDVQATREKLAERVAALHALQGGEPMVPLQVDGHVVAE
IVAAWTGIPLGRMVKDEIGTVLNLKPLLAARVIGQDHALEAIAQRVRTASANLEDPNKPRGVFMFVGPSGVGKTETALAL
ADILYGGERKMITINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGM
MDDAEGREIDFRNTLIILTSNVGSAAVMQACLNKPAEELPDPDALAEALRPQLYKAFKPAFLGRMKVVPYYPISDDVLAE
IIELKLERIRSRIEANHKAAFEWDESLVEAVLARCTEVDSGARNVDHILNGTLLPEIAGHVLGRIADGASIARIAVRADD
AGEFAYTVE
>Mature_888_residues
STPLKTLITKLNPLCRHAAERAASACLARGHYEVDLEHLFLALLEEPAGDLSLALRASRIDAHALRADLERELTRLKTGN
TRTPVFSVHLIALFEQAWLIASLDSQLGRIRSGHLLLALLTAPDLAQFAQRMSARFSEVNVTDLKHKFDEITAGSSEAEP
HRADAEHGDAAAPAEGGAPAAGASKTPALDTYTTNLTQRARDGKIDPVIGREAEIRQAIDILMRRRQNNPIMTGEAGVGK
TAVVEGLALRIAADDVPPPLRGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSPHPIILFIDEAHTIIGAGGQAGQ
NDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALARRFQVVKVEEPSESLAAAMLRGMAGLMEKHFNVRILDDAITE
AVRLSHRYISGRQLPDKAISVLDTACAKVALAHSATPAAIDDTKKRTERIDAEIASLERDAASGAAHDERLGELRGARDA
ALEQLAKDEARYEAERAIVAEITALRETLDRARAPADDGQPVDVQATREKLAERVAALHALQGGEPMVPLQVDGHVVAEI
VAAWTGIPLGRMVKDEIGTVLNLKPLLAARVIGQDHALEAIAQRVRTASANLEDPNKPRGVFMFVGPSGVGKTETALALA
DILYGGERKMITINMSEYQEAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGMM
DDAEGREIDFRNTLIILTSNVGSAAVMQACLNKPAEELPDPDALAEALRPQLYKAFKPAFLGRMKVVPYYPISDDVLAEI
IELKLERIRSRIEANHKAAFEWDESLVEAVLARCTEVDSGARNVDHILNGTLLPEIAGHVLGRIADGASIARIAVRADDA
GEFAYTVE

Specific function: Required for secretion of hcp1 probably by providing the energy source for its translocation [H]

COG id: COG0542

COG function: function code O; ATPases with chaperone activity, ATP-binding subunit

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the clpA/clpB family [H]

Homologues:

Organism=Homo sapiens, GI13540606, Length=321, Percent_Identity=33.3333333333333, Blast_Score=171, Evalue=3e-42,
Organism=Escherichia coli, GI1788943, Length=822, Percent_Identity=39.9026763990268, Blast_Score=524, Evalue=1e-149,
Organism=Escherichia coli, GI1787109, Length=472, Percent_Identity=36.0169491525424, Blast_Score=248, Evalue=1e-66,
Organism=Saccharomyces cerevisiae, GI6320464, Length=706, Percent_Identity=39.2351274787535, Blast_Score=461, Evalue=1e-130,
Organism=Saccharomyces cerevisiae, GI6323002, Length=780, Percent_Identity=35.3846153846154, Blast_Score=457, Evalue=1e-129,

Paralogues:

None

Copy number: 560 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR013093
- InterPro:   IPR003959
- InterPro:   IPR017729
- InterPro:   IPR018368
- InterPro:   IPR001270
- InterPro:   IPR019489
- InterPro:   IPR023150 [H]

Pfam domain/function: PF00004 AAA; PF07724 AAA_2; PF10431 ClpB_D2-small [H]

EC number: NA

Molecular weight: Translated: 96118; Mature: 95987

Theoretical pI: Translated: 5.50; Mature: 5.50

Prosite motif: PS00870 CLPAB_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTPLKTLITKLNPLCRHAAERAASACLARGHYEVDLEHLFLALLEEPAGDLSLALRASR
CCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHCCCCCHHHHHHHHH
IDAHALRADLERELTRLKTGNTRTPVFSVHLIALFEQAWLIASLDSQLGRIRSGHLLLAL
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
LTAPDLAQFAQRMSARFSEVNVTDLKHKFDEITAGSSEAEPHRADAEHGDAAAPAEGGAP
ECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAGASKTPALDTYTTNLTQRARDGKIDPVIGREAEIRQAIDILMRRRQNNPIMTGEAGVG
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCC
KTAVVEGLALRIAADDVPPPLRGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSPH
HHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
PIILFIDEAHTIIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALAR
CEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
RFQVVKVEEPSESLAAAMLRGMAGLMEKHFNVRILDDAITEAVRLSHRYISGRQLPDKAI
HEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHH
SVLDTACAKVALAHSATPAAIDDTKKRTERIDAEIASLERDAASGAAHDERLGELRGARD
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHH
AALEQLAKDEARYEAERAIVAEITALRETLDRARAPADDGQPVDVQATREKLAERVAALH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
ALQGGEPMVPLQVDGHVVAEIVAAWTGIPLGRMVKDEIGTVLNLKPLLAARVIGQDHALE
HHCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHCCHHCHHHHHHHHHHCCHHHHH
AIAQRVRTASANLEDPNKPRGVFMFVGPSGVGKTETALALADILYGGERKMITINMSEYQ
HHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHH
EAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGM
HHHHCCCCCCCCCCEEECCCCCHHHHHHHCCCCEEEEECCHHHCCHHHHHHHHHHHCCCC
MDDAEGREIDFRNTLIILTSNVGSAAVMQACLNKPAEELPDPDALAEALRPQLYKAFKPA
CCCCCCCEEECCCEEEEEECCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHH
FLGRMKVVPYYPISDDVLAEIIELKLERIRSRIEANHKAAFEWDESLVEAVLARCTEVDS
HHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
GARNVDHILNGTLLPEIAGHVLGRIADGASIARIAVRADDAGEFAYTVE
CCHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEC
>Mature Secondary Structure 
STPLKTLITKLNPLCRHAAERAASACLARGHYEVDLEHLFLALLEEPAGDLSLALRASR
CCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCEECHHHHHHHHHHCCCCCHHHHHHHHH
IDAHALRADLERELTRLKTGNTRTPVFSVHLIALFEQAWLIASLDSQLGRIRSGHLLLAL
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
LTAPDLAQFAQRMSARFSEVNVTDLKHKFDEITAGSSEAEPHRADAEHGDAAAPAEGGAP
ECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAGASKTPALDTYTTNLTQRARDGKIDPVIGREAEIRQAIDILMRRRQNNPIMTGEAGVG
CCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCC
KTAVVEGLALRIAADDVPPPLRGVALHVLDMGLLQAGASVKGEFENRLKSVIDEVKKSPH
HHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCC
PIILFIDEAHTIIGAGGQAGQNDAANLLKPALARGELRTIAATTWSEYKKYFEKDAALAR
CEEEEEECCCEEEECCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH
RFQVVKVEEPSESLAAAMLRGMAGLMEKHFNVRILDDAITEAVRLSHRYISGRQLPDKAI
HEEEEEECCCHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHCCCCCCHHHH
SVLDTACAKVALAHSATPAAIDDTKKRTERIDAEIASLERDAASGAAHDERLGELRGARD
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHH
AALEQLAKDEARYEAERAIVAEITALRETLDRARAPADDGQPVDVQATREKLAERVAALH
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHH
ALQGGEPMVPLQVDGHVVAEIVAAWTGIPLGRMVKDEIGTVLNLKPLLAARVIGQDHALE
HHCCCCCEEEEEECCHHHHHHHHHHCCCCHHHHHHHHHCCHHCHHHHHHHHHHCCHHHHH
AIAQRVRTASANLEDPNKPRGVFMFVGPSGVGKTETALALADILYGGERKMITINMSEYQ
HHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCEEEEEEHHHHH
EAHSVSGLKGSPPGYVGYGEGGVLTEAVRRNPYSVVLLDEVEKAHPDVLEMFFQVFDKGM
HHHHCCCCCCCCCCEEECCCCCHHHHHHHCCCCEEEEECCHHHCCHHHHHHHHHHHCCCC
MDDAEGREIDFRNTLIILTSNVGSAAVMQACLNKPAEELPDPDALAEALRPQLYKAFKPA
CCCCCCCEEECCCEEEEEECCCCHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHH
FLGRMKVVPYYPISDDVLAEIIELKLERIRSRIEANHKAAFEWDESLVEAVLARCTEVDS
HHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCC
GARNVDHILNGTLLPEIAGHVLGRIADGASIARIAVRADDAGEFAYTVE
CCHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Serine endopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]