| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is yjjK [C]
Identifier: 161526050
GI number: 161526050
Start: 3145846
End: 3147513
Strand: Direct
Name: yjjK [C]
Synonym: Bmul_2881
Alternate gene names: 161526050
Gene position: 3145846-3147513 (Clockwise)
Preceding gene: 161526049
Following gene: 161526055
Centisome position: 91.22
GC content: 64.39
Gene sequence:
>1668_bases ATGGCCCAATACGTTTTCACGATGAACCGGGTCGGCAAGATCGTGCCGCCCAAGCGCCAGATTCTGAAGGACATCTCGCT GTCGTTCTTTCCGGGCGCGAAGATCGGCGTGCTCGGCCTGAACGGCTCGGGCAAGTCGACGCTGATCCGCATCATGGCGG GCGTCGACAAGGACATCGAAGGCGAAGCGACGCCGATGCCGAACCTGAACATCGGCTACCTGCCGCAAGAACCGCAGCTC GATCCGAGCAAGACGGTGCGCGAGGCGGTCGAGGAAGGGCTCGGCGATCTGTTCCAGGCGAACAAGAAGCTCGAGGAAAT CTACGCCGCGTATGCGGAACCGGACGCCGACTTCGACGCGCTCGCGGCCGAGCAGGCGAAATACGAGGCGATCCTCGCGT CGAGCGACGGCGGCAGCCCCGAGCAGCAGCTCGAAGTGGCGGCCGACGCGCTGCGCCTGCCGCCGTGGGACGCGAAGATC GAGCACCTGTCGGGCGGCGAAAAGCGCCGCGTCGCGCTGTGCAAGCTGCTGCTCGAAAAGCCCGACATGCTGCTGCTGGA CGAACCGACCAACCACCTCGATGCGGAATCGGTCGACTGGCTCGAGCAGTTCCTCGTGCGCTTCCCGGGCACGGTCGTCG CCGTCACGCACGATCGCTACTTCCTCGACAACGCAGCCGAGTGGATTCTCGAACTCGACCGCGGCCACGGCATTCCGTGG AAGGGCAACTACAGCAGCTGGCTCGACCAGAAGGAGGAACGCCTGAAGCAGGAAGAGGCGGCCGAATCCGCGCGCCAGAA GGCGATCAAGAAGGAACTGGAGTGGGTGCGCCAGAACCCGAAGGGCCGTCAGGCGAAGTCGAAGGCGCGTATCGCGCGCT TCGAGGAGCTGAACAGCCAGGAATACCAGAAGCGCAACGAAACGCAGGAAATCTTCATTCCGGTCGGCGATCGCCTCGGC AATGAAGTGATCGAATTCAAGAACGTCAGCAAGTCGTACGGCGATCGGCTGCTGATCGACAACCTGAGCTTCAAGATTCC GGCCGGCGCGATCGTCGGCATCATCGGTCCGAACGGCGCCGGCAAGTCGACGCTGTTCCGGATGATCACGGGCAAGGAGC AGCCGGATTCGGGCGAGATCGTGACGGGCCCGACCGTGAAGCTCGCGTACGTCGACCAGAGCCGCGATGCGCTCGACGGC TCGAAGACGGTGTTCGAGGAAATCTCGGGCGGCGCCGACGTGCTGACGGTCGGCAAGTACGAAACGCCGTCGCGCGCGTA CATCGGCCGCTTCAACTTCAAGGGCGGCGACCAGCAGAAGATCGTCGGCAACCTGTCCGGCGGCGAGCGCGGGCGCCTGC ACCTCGCGAAGACGCTGATCTCCGGCGGCAACGTGCTGCTGCTCGACGAACCGTCGAACGACCTCGACGTCGAAACGCTG CGCGCACTCGAAGACGCGCTGCTCGAGTTCGCGGGCTCGGTGATGGTGATCTCGCACGATCGCTGGTTCCTCGACCGGAT CGCGACGCACATCCTCGCGTTCGAAGGCGACTCGCAGGTCACGTTCTTCGACGGCAACTACCAGGAATACGAAGCCGACA AGCGCGCACGGCTCGGCGAGGAAGCGGCGAAGCCGAAGCGCATCCGCTACAAGCCGATCACGCGCTGA
Upstream 100 bases:
>100_bases CACCGCCGCGCACCGCGCGGCCGCTCCGTACCGAATCATCCGACGCCGCCACGCCAGCGCGCTGCGCGGCCGTCTCAACC ACTTCTGACTTCACACCGAA
Downstream 100 bases:
>100_bases TCGGCCGGCGGCCCCGCCGACGCACAAACCCCGCGCTGTCCGTCCGAAGCGCGGGGTTTTTGTTGGCGGCGGCTTACGCG AGCGCGCCGAGTTCGCGCAG
Product: putative ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 555; Mature: 554
Protein sequence:
>555_residues MAQYVFTMNRVGKIVPPKRQILKDISLSFFPGAKIGVLGLNGSGKSTLIRIMAGVDKDIEGEATPMPNLNIGYLPQEPQL DPSKTVREAVEEGLGDLFQANKKLEEIYAAYAEPDADFDALAAEQAKYEAILASSDGGSPEQQLEVAADALRLPPWDAKI EHLSGGEKRRVALCKLLLEKPDMLLLDEPTNHLDAESVDWLEQFLVRFPGTVVAVTHDRYFLDNAAEWILELDRGHGIPW KGNYSSWLDQKEERLKQEEAAESARQKAIKKELEWVRQNPKGRQAKSKARIARFEELNSQEYQKRNETQEIFIPVGDRLG NEVIEFKNVSKSYGDRLLIDNLSFKIPAGAIVGIIGPNGAGKSTLFRMITGKEQPDSGEIVTGPTVKLAYVDQSRDALDG SKTVFEEISGGADVLTVGKYETPSRAYIGRFNFKGGDQQKIVGNLSGGERGRLHLAKTLISGGNVLLLDEPSNDLDVETL RALEDALLEFAGSVMVISHDRWFLDRIATHILAFEGDSQVTFFDGNYQEYEADKRARLGEEAAKPKRIRYKPITR
Sequences:
>Translated_555_residues MAQYVFTMNRVGKIVPPKRQILKDISLSFFPGAKIGVLGLNGSGKSTLIRIMAGVDKDIEGEATPMPNLNIGYLPQEPQL DPSKTVREAVEEGLGDLFQANKKLEEIYAAYAEPDADFDALAAEQAKYEAILASSDGGSPEQQLEVAADALRLPPWDAKI EHLSGGEKRRVALCKLLLEKPDMLLLDEPTNHLDAESVDWLEQFLVRFPGTVVAVTHDRYFLDNAAEWILELDRGHGIPW KGNYSSWLDQKEERLKQEEAAESARQKAIKKELEWVRQNPKGRQAKSKARIARFEELNSQEYQKRNETQEIFIPVGDRLG NEVIEFKNVSKSYGDRLLIDNLSFKIPAGAIVGIIGPNGAGKSTLFRMITGKEQPDSGEIVTGPTVKLAYVDQSRDALDG SKTVFEEISGGADVLTVGKYETPSRAYIGRFNFKGGDQQKIVGNLSGGERGRLHLAKTLISGGNVLLLDEPSNDLDVETL RALEDALLEFAGSVMVISHDRWFLDRIATHILAFEGDSQVTFFDGNYQEYEADKRARLGEEAAKPKRIRYKPITR >Mature_554_residues AQYVFTMNRVGKIVPPKRQILKDISLSFFPGAKIGVLGLNGSGKSTLIRIMAGVDKDIEGEATPMPNLNIGYLPQEPQLD PSKTVREAVEEGLGDLFQANKKLEEIYAAYAEPDADFDALAAEQAKYEAILASSDGGSPEQQLEVAADALRLPPWDAKIE HLSGGEKRRVALCKLLLEKPDMLLLDEPTNHLDAESVDWLEQFLVRFPGTVVAVTHDRYFLDNAAEWILELDRGHGIPWK GNYSSWLDQKEERLKQEEAAESARQKAIKKELEWVRQNPKGRQAKSKARIARFEELNSQEYQKRNETQEIFIPVGDRLGN EVIEFKNVSKSYGDRLLIDNLSFKIPAGAIVGIIGPNGAGKSTLFRMITGKEQPDSGEIVTGPTVKLAYVDQSRDALDGS KTVFEEISGGADVLTVGKYETPSRAYIGRFNFKGGDQQKIVGNLSGGERGRLHLAKTLISGGNVLLLDEPSNDLDVETLR ALEDALLEFAGSVMVISHDRWFLDRIATHILAFEGDSQVTFFDGNYQEYEADKRARLGEEAAKPKRIRYKPITR
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=531, Percent_Identity=27.683615819209, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI10947137, Length=538, Percent_Identity=29.182156133829, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI27881506, Length=538, Percent_Identity=29.182156133829, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI10947135, Length=539, Percent_Identity=28.5714285714286, Blast_Score=164, Evalue=1e-40, Organism=Homo sapiens, GI69354671, Length=539, Percent_Identity=28.5714285714286, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI30795238, Length=176, Percent_Identity=30.1136363636364, Blast_Score=76, Evalue=1e-13, Organism=Homo sapiens, GI27881501, Length=176, Percent_Identity=30.1136363636364, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI21536376, Length=227, Percent_Identity=28.6343612334802, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI150417984, Length=200, Percent_Identity=29, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI47078218, Length=209, Percent_Identity=26.7942583732057, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI45446740, Length=209, Percent_Identity=26.7942583732057, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI171184400, Length=204, Percent_Identity=29.4117647058824, Blast_Score=68, Evalue=3e-11, Organism=Homo sapiens, GI31657092, Length=212, Percent_Identity=27.8301886792453, Blast_Score=67, Evalue=4e-11, Organism=Homo sapiens, GI255708477, Length=186, Percent_Identity=29.0322580645161, Blast_Score=66, Evalue=1e-10, Organism=Escherichia coli, GI2367384, Length=555, Percent_Identity=72.4324324324324, Blast_Score=838, Evalue=0.0, Organism=Escherichia coli, GI1787182, Length=514, Percent_Identity=33.4630350194552, Blast_Score=270, Evalue=2e-73, Organism=Escherichia coli, GI1789751, Length=519, Percent_Identity=31.9845857418112, Blast_Score=239, Evalue=4e-64, Organism=Escherichia coli, GI1787041, Length=523, Percent_Identity=32.1223709369025, Blast_Score=235, Evalue=7e-63, Organism=Escherichia coli, GI87081782, Length=574, Percent_Identity=25.2613240418118, Blast_Score=112, Evalue=5e-26, Organism=Escherichia coli, GI87081709, Length=193, Percent_Identity=31.6062176165803, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI48994943, Length=479, Percent_Identity=24.2171189979123, Blast_Score=96, Evalue=5e-21, Organism=Escherichia coli, GI1788761, Length=198, Percent_Identity=32.8282828282828, Blast_Score=85, Evalue=1e-17, Organism=Escherichia coli, GI1788165, Length=190, Percent_Identity=31.5789473684211, Blast_Score=83, Evalue=4e-17, Organism=Escherichia coli, GI1786975, Length=397, Percent_Identity=25.1889168765743, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI87081791, Length=194, Percent_Identity=31.4432989690722, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1786345, Length=231, Percent_Identity=28.5714285714286, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1787164, Length=187, Percent_Identity=29.9465240641711, Blast_Score=79, Evalue=7e-16, Organism=Escherichia coli, GI1786398, Length=208, Percent_Identity=28.8461538461538, Blast_Score=77, Evalue=3e-15, Organism=Escherichia coli, GI1787712, Length=191, Percent_Identity=29.8429319371728, Blast_Score=73, Evalue=5e-14, Organism=Escherichia coli, GI1788225, Length=211, Percent_Identity=27.4881516587678, Blast_Score=73, Evalue=6e-14, Organism=Escherichia coli, GI1790467, Length=218, Percent_Identity=30.2752293577982, Blast_Score=72, Evalue=7e-14, Organism=Escherichia coli, GI1788897, Length=204, Percent_Identity=28.921568627451, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1788450, Length=209, Percent_Identity=27.7511961722488, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI87081834, Length=210, Percent_Identity=29.5238095238095, Blast_Score=70, Evalue=3e-13, Organism=Escherichia coli, GI1786563, Length=190, Percent_Identity=25.2631578947368, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1789873, Length=229, Percent_Identity=24.8908296943231, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1787089, Length=245, Percent_Identity=28.5714285714286, Blast_Score=65, Evalue=1e-11, Organism=Escherichia coli, GI1788644, Length=215, Percent_Identity=29.3023255813954, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI87082267, Length=226, Percent_Identity=27.8761061946903, Blast_Score=63, Evalue=6e-11, Organism=Caenorhabditis elegans, GI17559834, Length=544, Percent_Identity=27.5735294117647, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17553372, Length=528, Percent_Identity=30.1136363636364, Blast_Score=189, Evalue=4e-48, Organism=Caenorhabditis elegans, GI17555318, Length=557, Percent_Identity=27.1095152603232, Blast_Score=172, Evalue=6e-43, Organism=Caenorhabditis elegans, GI193208177, Length=229, Percent_Identity=28.82096069869, Blast_Score=75, Evalue=1e-13, Organism=Caenorhabditis elegans, GI115534520, Length=199, Percent_Identity=30.6532663316583, Blast_Score=69, Evalue=7e-12, Organism=Caenorhabditis elegans, GI212646699, Length=184, Percent_Identity=28.2608695652174, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71992285, Length=259, Percent_Identity=29.3436293436293, Blast_Score=67, Evalue=3e-11, Organism=Caenorhabditis elegans, GI115533592, Length=213, Percent_Identity=27.6995305164319, Blast_Score=65, Evalue=9e-11, Organism=Saccharomyces cerevisiae, GI6320874, Length=552, Percent_Identity=30.2536231884058, Blast_Score=200, Evalue=5e-52, Organism=Saccharomyces cerevisiae, GI6321121, Length=541, Percent_Identity=26.8022181146026, Blast_Score=185, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6323278, Length=376, Percent_Identity=25.7978723404255, Blast_Score=113, Evalue=8e-26, Organism=Saccharomyces cerevisiae, GI6324314, Length=376, Percent_Identity=26.063829787234, Blast_Score=112, Evalue=2e-25, Organism=Saccharomyces cerevisiae, GI6325030, Length=384, Percent_Identity=26.3020833333333, Blast_Score=108, Evalue=2e-24, Organism=Saccharomyces cerevisiae, GI6320266, Length=375, Percent_Identity=24.8, Blast_Score=87, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6323959, Length=200, Percent_Identity=30, Blast_Score=70, Evalue=1e-12, Organism=Drosophila melanogaster, GI24666836, Length=532, Percent_Identity=29.3233082706767, Blast_Score=190, Evalue=2e-48, Organism=Drosophila melanogaster, GI24642252, Length=545, Percent_Identity=28.9908256880734, Blast_Score=189, Evalue=6e-48, Organism=Drosophila melanogaster, GI18859989, Length=545, Percent_Identity=28.9908256880734, Blast_Score=189, Evalue=6e-48, Organism=Drosophila melanogaster, GI24641342, Length=546, Percent_Identity=28.7545787545788, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI21357907, Length=200, Percent_Identity=30.5, Blast_Score=79, Evalue=1e-14, Organism=Drosophila melanogaster, GI24666092, Length=209, Percent_Identity=31.1004784688995, Blast_Score=72, Evalue=7e-13, Organism=Drosophila melanogaster, GI85725262, Length=240, Percent_Identity=27.0833333333333, Blast_Score=71, Evalue=2e-12, Organism=Drosophila melanogaster, GI221512771, Length=175, Percent_Identity=31.4285714285714, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI24648279, Length=177, Percent_Identity=31.0734463276836, Blast_Score=66, Evalue=7e-11, Organism=Drosophila melanogaster, GI161078426, Length=177, Percent_Identity=31.0734463276836, Blast_Score=66, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022374 - InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 61690; Mature: 61558
Theoretical pI: Translated: 5.01; Mature: 5.01
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQYVFTMNRVGKIVPPKRQILKDISLSFFPGAKIGVLGLNGSGKSTLIRIMAGVDKDIE CCCEEEEHHHCCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCC GEATPMPNLNIGYLPQEPQLDPSKTVREAVEEGLGDLFQANKKLEEIYAAYAEPDADFDA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LAAEQAKYEAILASSDGGSPEQQLEVAADALRLPPWDAKIEHLSGGEKRRVALCKLLLEK HHHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHCC PDMLLLDEPTNHLDAESVDWLEQFLVRFPGTVVAVTHDRYFLDNAAEWILELDRGHGIPW CCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCC KGNYSSWLDQKEERLKQEEAAESARQKAIKKELEWVRQNPKGRQAKSKARIARFEELNSQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHH EYQKRNETQEIFIPVGDRLGNEVIEFKNVSKSYGDRLLIDNLSFKIPAGAIVGIIGPNGA HHHHCCCCEEEEEECCHHCCHHHHHHHHHHHHHCCEEEEECCCEEECCCEEEEEECCCCC GKSTLFRMITGKEQPDSGEIVTGPTVKLAYVDQSRDALDGSKTVFEEISGGADVLTVGKY CHHHHHHHHCCCCCCCCCCEEECCEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEECCC ETPSRAYIGRFNFKGGDQQKIVGNLSGGERGRLHLAKTLISGGNVLLLDEPSNDLDVETL CCCCCCEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHH RALEDALLEFAGSVMVISHDRWFLDRIATHILAFEGDSQVTFFDGNYQEYEADKRARLGE HHHHHHHHHHCCCEEEEECCHHHHHHHHHHHEEECCCCEEEEECCCCHHHHHHHHHHCCH EAAKPKRIRYKPITR HHCCCCCCCCCCCCC >Mature Secondary Structure AQYVFTMNRVGKIVPPKRQILKDISLSFFPGAKIGVLGLNGSGKSTLIRIMAGVDKDIE CCEEEEHHHCCCCCCCHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHCCCCCCC GEATPMPNLNIGYLPQEPQLDPSKTVREAVEEGLGDLFQANKKLEEIYAAYAEPDADFDA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LAAEQAKYEAILASSDGGSPEQQLEVAADALRLPPWDAKIEHLSGGEKRRVALCKLLLEK HHHHHHHEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHHHCC PDMLLLDEPTNHLDAESVDWLEQFLVRFPGTVVAVTHDRYFLDNAAEWILELDRGHGIPW CCEEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCC KGNYSSWLDQKEERLKQEEAAESARQKAIKKELEWVRQNPKGRQAKSKARIARFEELNSQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCHH EYQKRNETQEIFIPVGDRLGNEVIEFKNVSKSYGDRLLIDNLSFKIPAGAIVGIIGPNGA HHHHCCCCEEEEEECCHHCCHHHHHHHHHHHHHCCEEEEECCCEEECCCEEEEEECCCCC GKSTLFRMITGKEQPDSGEIVTGPTVKLAYVDQSRDALDGSKTVFEEISGGADVLTVGKY CHHHHHHHHCCCCCCCCCCEEECCEEEEEEECCCCCCCCCHHHHHHHHCCCCCEEEECCC ETPSRAYIGRFNFKGGDQQKIVGNLSGGERGRLHLAKTLISGGNVLLLDEPSNDLDVETL CCCCCCEEEEECCCCCCCCEEEEECCCCCCCHHHHHHHHHCCCCEEEEECCCCCCCHHHH RALEDALLEFAGSVMVISHDRWFLDRIATHILAFEGDSQVTFFDGNYQEYEADKRARLGE HHHHHHHHHHCCCEEEEECCHHHHHHHHHHHEEECCCCEEEEECCCCHHHHHHHHHHCCH EAAKPKRIRYKPITR HHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800; 10675023 [H]