| Definition | Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010084 |
| Length | 3,448,466 |
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The map label for this gene is ybfB [H]
Identifier: 161526047
GI number: 161526047
Start: 3142814
End: 3144193
Strand: Reverse
Name: ybfB [H]
Synonym: Bmul_2878
Alternate gene names: 161526047
Gene position: 3144193-3142814 (Counterclockwise)
Preceding gene: 161526051
Following gene: 161526046
Centisome position: 91.18
GC content: 73.33
Gene sequence:
>1380_bases ATGACGCAAATCCGGACGCCGGCGTGGCGGCCGGTGCGGCTCGGGAGGAGCATCGTGATCGATCGCCTGCGCACATCGCG CGTGTTCTACGGCTGGTACGTGGTCGCCGCCGCGTTCGCCGTGACGTTCGTCGGATTCGGCAGCGCCTATACGTTCAGCG CCTTCGTCGAGCCGCTGCAGCGCGATTTCGCCGCGTCGCGCGGCCAGATCTCGCTCGTGTTCTCGCTCGCCGGTTTCCTG TATTTCGGCTTCGGCATCGTCAGCGGGCCGCTCGCCGATCGATTCGGCTCGCGGCGGCTGGCCGTCGTCGGCATGTTGCT GACCGCCGCCGGGCTCGCGGCCGCCGGCGCCGCACGTACGCTGCTGCAGGTCTATGCGGCATACGGGCTCGGCGTGGGCT TCGGCGTCGGCTGCGCGTACGTGCCGGCCGTCGGCGCCGTGCAGCGCTGGTTCGTGCGGCGCCGCGGCTTCGCGTCGGGG CTCGCGGTCGCGGGGATCGGCGTCGGCACGCTCGTGATGCCGCCGCTCGCGTCCGCGCTGATCGCGCAGGTCGGCTGGCG CGGCGCGTACTTCGCGCTGGCCGTGCTTGCGGTCGTGCTCGGCGCGGGGATGTCGCTGCTGATCGAGAACGATCCGCGCG GGGGCGGACTGCTGCCCGATGGCGATGTGACGGATCCGGCCGCCGACGGCGCGTCGGCGCCGGCGCTTGATCGCGGCCCG TGTGCCGGGCCGGCGCCGTCCGATGCGGCGCCGCGGCGCAGTGCGACTGACGTGCCGGGTGCCGGTGCGACGGTGCGCGA AGCCGTCATGTCGCGGCCGTTCGCGAGCCTTTACGCGGCTTGCCTCGTCTGCTCGTTCGGCGTGTTCGTGCCGTTCGTGC ATCTCGTGCCGTACGCGGTCGATCATGGCGTCGCGCCGGCCGCGGCCGTGCTGCTGCTCGGCGCGATCGGCGTCGGCAGC ACGGCCGGGCGCTTCTTCCTCGGCGGCCTCGCCGACCGCTTCGGCCGCCGCGCGTCGTTGCTCGCGATGTTCGCCGGTAT GGCTGTCGCGCTCGTCGCGTGGGCGGGCGCCGGCACCGTTGCGACGCTCGCAGCGTTCGCGCTCGTGTTCGGCGTGTTCT ACGGCGGCTGGGTCGCCGTGCTGCCCGCGGTCGTGATGGACGCCTTTGGCGGACGCAACGTCAGCGCGATCATCGGCGTG CTCTATACGAGCGTCGCGTTCGGCACGCTGATCGGGCCGGCCGCGGCCGGCTTCATCTACGACGCCGGCGGCGGCTATCT GGTGCCGATCCTGGCCAGCGCCGCCGCCAACGCGATCGCGTTCGCGATCGTCGCGACGAGCGGGCGCACGCGAGCGGCGG CGCGCGCGGCCGGCGGATAG
Upstream 100 bases:
>100_bases TGAGGCGCTGCGCACGCGCGAGTAACGTGGGTGTGTCGGATCGCGTTGCCGACGTTGCCGTGGCGGCGGGCGATGCGGTC AACATAGTTCAACTATATCC
Downstream 100 bases:
>100_bases GCGAACCGCGCGATTTCCGTTAGGGTGGGCGGATCGTGAACCGGCGACGAATCGCGGAGGAGGCTGTCATGACGTTCGAC GAAGTTCGGCAAATCGTGCT
Product: major facilitator transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MTQIRTPAWRPVRLGRSIVIDRLRTSRVFYGWYVVAAAFAVTFVGFGSAYTFSAFVEPLQRDFAASRGQISLVFSLAGFL YFGFGIVSGPLADRFGSRRLAVVGMLLTAAGLAAAGAARTLLQVYAAYGLGVGFGVGCAYVPAVGAVQRWFVRRRGFASG LAVAGIGVGTLVMPPLASALIAQVGWRGAYFALAVLAVVLGAGMSLLIENDPRGGGLLPDGDVTDPAADGASAPALDRGP CAGPAPSDAAPRRSATDVPGAGATVREAVMSRPFASLYAACLVCSFGVFVPFVHLVPYAVDHGVAPAAAVLLLGAIGVGS TAGRFFLGGLADRFGRRASLLAMFAGMAVALVAWAGAGTVATLAAFALVFGVFYGGWVAVLPAVVMDAFGGRNVSAIIGV LYTSVAFGTLIGPAAAGFIYDAGGGYLVPILASAAANAIAFAIVATSGRTRAAARAAGG
Sequences:
>Translated_459_residues MTQIRTPAWRPVRLGRSIVIDRLRTSRVFYGWYVVAAAFAVTFVGFGSAYTFSAFVEPLQRDFAASRGQISLVFSLAGFL YFGFGIVSGPLADRFGSRRLAVVGMLLTAAGLAAAGAARTLLQVYAAYGLGVGFGVGCAYVPAVGAVQRWFVRRRGFASG LAVAGIGVGTLVMPPLASALIAQVGWRGAYFALAVLAVVLGAGMSLLIENDPRGGGLLPDGDVTDPAADGASAPALDRGP CAGPAPSDAAPRRSATDVPGAGATVREAVMSRPFASLYAACLVCSFGVFVPFVHLVPYAVDHGVAPAAAVLLLGAIGVGS TAGRFFLGGLADRFGRRASLLAMFAGMAVALVAWAGAGTVATLAAFALVFGVFYGGWVAVLPAVVMDAFGGRNVSAIIGV LYTSVAFGTLIGPAAAGFIYDAGGGYLVPILASAAANAIAFAIVATSGRTRAAARAAGG >Mature_458_residues TQIRTPAWRPVRLGRSIVIDRLRTSRVFYGWYVVAAAFAVTFVGFGSAYTFSAFVEPLQRDFAASRGQISLVFSLAGFLY FGFGIVSGPLADRFGSRRLAVVGMLLTAAGLAAAGAARTLLQVYAAYGLGVGFGVGCAYVPAVGAVQRWFVRRRGFASGL AVAGIGVGTLVMPPLASALIAQVGWRGAYFALAVLAVVLGAGMSLLIENDPRGGGLLPDGDVTDPAADGASAPALDRGPC AGPAPSDAAPRRSATDVPGAGATVREAVMSRPFASLYAACLVCSFGVFVPFVHLVPYAVDHGVAPAAAVLLLGAIGVGST AGRFFLGGLADRFGRRASLLAMFAGMAVALVAWAGAGTVATLAAFALVFGVFYGGWVAVLPAVVMDAFGGRNVSAIIGVL YTSVAFGTLIGPAAAGFIYDAGGGYLVPILASAAANAIAFAIVATSGRTRAAARAAGG
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Homo sapiens, GI291621700, Length=404, Percent_Identity=25.990099009901, Blast_Score=125, Evalue=6e-29, Organism=Homo sapiens, GI24431958, Length=454, Percent_Identity=25.7709251101322, Blast_Score=116, Evalue=5e-26, Organism=Homo sapiens, GI114796626, Length=451, Percent_Identity=30.5986696230599, Blast_Score=115, Evalue=9e-26, Organism=Homo sapiens, GI42475555, Length=402, Percent_Identity=26.865671641791, Blast_Score=103, Evalue=3e-22, Organism=Homo sapiens, GI41327156, Length=448, Percent_Identity=26.3392857142857, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI262073007, Length=389, Percent_Identity=25.4498714652956, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI115583685, Length=389, Percent_Identity=25.4498714652956, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI109288012, Length=416, Percent_Identity=27.8846153846154, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI109288010, Length=416, Percent_Identity=27.8846153846154, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI4759112, Length=416, Percent_Identity=27.8846153846154, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI292781289, Length=447, Percent_Identity=22.5950782997763, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI40789261, Length=447, Percent_Identity=22.5950782997763, Blast_Score=97, Evalue=4e-20, Organism=Homo sapiens, GI34916028, Length=458, Percent_Identity=23.3624454148472, Blast_Score=84, Evalue=3e-16, Organism=Homo sapiens, GI4759114, Length=447, Percent_Identity=21.7002237136465, Blast_Score=79, Evalue=6e-15, Organism=Homo sapiens, GI4759116, Length=162, Percent_Identity=27.7777777777778, Blast_Score=70, Evalue=5e-12, Organism=Homo sapiens, GI23503293, Length=416, Percent_Identity=27.8846153846154, Blast_Score=67, Evalue=4e-11, Organism=Escherichia coli, GI1789969, Length=392, Percent_Identity=25, Blast_Score=77, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17550316, Length=170, Percent_Identity=31.7647058823529, Blast_Score=90, Evalue=3e-18, Organism=Caenorhabditis elegans, GI115533486, Length=167, Percent_Identity=31.1377245508982, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI115533490, Length=167, Percent_Identity=31.1377245508982, Blast_Score=82, Evalue=5e-16, Organism=Caenorhabditis elegans, GI115533488, Length=167, Percent_Identity=31.1377245508982, Blast_Score=81, Evalue=9e-16, Organism=Caenorhabditis elegans, GI17568977, Length=158, Percent_Identity=31.6455696202532, Blast_Score=81, Evalue=1e-15, Organism=Caenorhabditis elegans, GI32567122, Length=143, Percent_Identity=32.1678321678322, Blast_Score=75, Evalue=7e-14, Organism=Caenorhabditis elegans, GI17557434, Length=143, Percent_Identity=32.1678321678322, Blast_Score=75, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6324453, Length=169, Percent_Identity=30.7692307692308, Blast_Score=69, Evalue=2e-12, Organism=Drosophila melanogaster, GI281360217, Length=192, Percent_Identity=32.2916666666667, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI28573971, Length=192, Percent_Identity=32.2916666666667, Blast_Score=94, Evalue=2e-19, Organism=Drosophila melanogaster, GI19923028, Length=165, Percent_Identity=33.3333333333333, Blast_Score=83, Evalue=3e-16, Organism=Drosophila melanogaster, GI24639306, Length=239, Percent_Identity=28.4518828451883, Blast_Score=82, Evalue=9e-16, Organism=Drosophila melanogaster, GI24585866, Length=160, Percent_Identity=26.875, Blast_Score=72, Evalue=8e-13, Organism=Drosophila melanogaster, GI281361096, Length=123, Percent_Identity=35.7723577235772, Blast_Score=72, Evalue=1e-12, Organism=Drosophila melanogaster, GI161077961, Length=123, Percent_Identity=35.7723577235772, Blast_Score=71, Evalue=1e-12, Organism=Drosophila melanogaster, GI24652823, Length=178, Percent_Identity=26.4044943820225, Blast_Score=69, Evalue=5e-12, Organism=Drosophila melanogaster, GI19922230, Length=171, Percent_Identity=29.2397660818713, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI24653578, Length=171, Percent_Identity=29.2397660818713, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI24653581, Length=171, Percent_Identity=29.2397660818713, Blast_Score=69, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 46390; Mature: 46259
Theoretical pI: Translated: 10.34; Mature: 10.34
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQIRTPAWRPVRLGRSIVIDRLRTSRVFYGWYVVAAAFAVTFVGFGSAYTFSAFVEPLQ CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RDFAASRGQISLVFSLAGFLYFGFGIVSGPLADRFGSRRLAVVGMLLTAAGLAAAGAART HHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LLQVYAAYGLGVGFGVGCAYVPAVGAVQRWFVRRRGFASGLAVAGIGVGTLVMPPLASAL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHH IAQVGWRGAYFALAVLAVVLGAGMSLLIENDPRGGGLLPDGDVTDPAADGASAPALDRGP HHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CAGPAPSDAAPRRSATDVPGAGATVREAVMSRPFASLYAACLVCSFGVFVPFVHLVPYAV CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DHGVAPAAAVLLLGAIGVGSTAGRFFLGGLADRFGRRASLLAMFAGMAVALVAWAGAGTV HCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHH ATLAAFALVFGVFYGGWVAVLPAVVMDAFGGRNVSAIIGVLYTSVAFGTLIGPAAAGFIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEE DAGGGYLVPILASAAANAIAFAIVATSGRTRAAARAAGG ECCCCCHHHHHHHHHHHHHEEEEEECCCCHHHHHHCCCC >Mature Secondary Structure TQIRTPAWRPVRLGRSIVIDRLRTSRVFYGWYVVAAAFAVTFVGFGSAYTFSAFVEPLQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH RDFAASRGQISLVFSLAGFLYFGFGIVSGPLADRFGSRRLAVVGMLLTAAGLAAAGAART HHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH LLQVYAAYGLGVGFGVGCAYVPAVGAVQRWFVRRRGFASGLAVAGIGVGTLVMPPLASAL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHH IAQVGWRGAYFALAVLAVVLGAGMSLLIENDPRGGGLLPDGDVTDPAADGASAPALDRGP HHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC CAGPAPSDAAPRRSATDVPGAGATVREAVMSRPFASLYAACLVCSFGVFVPFVHLVPYAV CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DHGVAPAAAVLLLGAIGVGSTAGRFFLGGLADRFGRRASLLAMFAGMAVALVAWAGAGTV HCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHH ATLAAFALVFGVFYGGWVAVLPAVVMDAFGGRNVSAIIGVLYTSVAFGTLIGPAAAGFIY HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEE DAGGGYLVPILASAAANAIAFAIVATSGRTRAAARAAGG ECCCCCHHHHHHHHHHHHHEEEEEECCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]