Definition Burkholderia multivorans ATCC 17616 chromosome chromosome 1, complete sequence.
Accession NC_010084
Length 3,448,466

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The map label for this gene is ybfB [H]

Identifier: 161526047

GI number: 161526047

Start: 3142814

End: 3144193

Strand: Reverse

Name: ybfB [H]

Synonym: Bmul_2878

Alternate gene names: 161526047

Gene position: 3144193-3142814 (Counterclockwise)

Preceding gene: 161526051

Following gene: 161526046

Centisome position: 91.18

GC content: 73.33

Gene sequence:

>1380_bases
ATGACGCAAATCCGGACGCCGGCGTGGCGGCCGGTGCGGCTCGGGAGGAGCATCGTGATCGATCGCCTGCGCACATCGCG
CGTGTTCTACGGCTGGTACGTGGTCGCCGCCGCGTTCGCCGTGACGTTCGTCGGATTCGGCAGCGCCTATACGTTCAGCG
CCTTCGTCGAGCCGCTGCAGCGCGATTTCGCCGCGTCGCGCGGCCAGATCTCGCTCGTGTTCTCGCTCGCCGGTTTCCTG
TATTTCGGCTTCGGCATCGTCAGCGGGCCGCTCGCCGATCGATTCGGCTCGCGGCGGCTGGCCGTCGTCGGCATGTTGCT
GACCGCCGCCGGGCTCGCGGCCGCCGGCGCCGCACGTACGCTGCTGCAGGTCTATGCGGCATACGGGCTCGGCGTGGGCT
TCGGCGTCGGCTGCGCGTACGTGCCGGCCGTCGGCGCCGTGCAGCGCTGGTTCGTGCGGCGCCGCGGCTTCGCGTCGGGG
CTCGCGGTCGCGGGGATCGGCGTCGGCACGCTCGTGATGCCGCCGCTCGCGTCCGCGCTGATCGCGCAGGTCGGCTGGCG
CGGCGCGTACTTCGCGCTGGCCGTGCTTGCGGTCGTGCTCGGCGCGGGGATGTCGCTGCTGATCGAGAACGATCCGCGCG
GGGGCGGACTGCTGCCCGATGGCGATGTGACGGATCCGGCCGCCGACGGCGCGTCGGCGCCGGCGCTTGATCGCGGCCCG
TGTGCCGGGCCGGCGCCGTCCGATGCGGCGCCGCGGCGCAGTGCGACTGACGTGCCGGGTGCCGGTGCGACGGTGCGCGA
AGCCGTCATGTCGCGGCCGTTCGCGAGCCTTTACGCGGCTTGCCTCGTCTGCTCGTTCGGCGTGTTCGTGCCGTTCGTGC
ATCTCGTGCCGTACGCGGTCGATCATGGCGTCGCGCCGGCCGCGGCCGTGCTGCTGCTCGGCGCGATCGGCGTCGGCAGC
ACGGCCGGGCGCTTCTTCCTCGGCGGCCTCGCCGACCGCTTCGGCCGCCGCGCGTCGTTGCTCGCGATGTTCGCCGGTAT
GGCTGTCGCGCTCGTCGCGTGGGCGGGCGCCGGCACCGTTGCGACGCTCGCAGCGTTCGCGCTCGTGTTCGGCGTGTTCT
ACGGCGGCTGGGTCGCCGTGCTGCCCGCGGTCGTGATGGACGCCTTTGGCGGACGCAACGTCAGCGCGATCATCGGCGTG
CTCTATACGAGCGTCGCGTTCGGCACGCTGATCGGGCCGGCCGCGGCCGGCTTCATCTACGACGCCGGCGGCGGCTATCT
GGTGCCGATCCTGGCCAGCGCCGCCGCCAACGCGATCGCGTTCGCGATCGTCGCGACGAGCGGGCGCACGCGAGCGGCGG
CGCGCGCGGCCGGCGGATAG

Upstream 100 bases:

>100_bases
TGAGGCGCTGCGCACGCGCGAGTAACGTGGGTGTGTCGGATCGCGTTGCCGACGTTGCCGTGGCGGCGGGCGATGCGGTC
AACATAGTTCAACTATATCC

Downstream 100 bases:

>100_bases
GCGAACCGCGCGATTTCCGTTAGGGTGGGCGGATCGTGAACCGGCGACGAATCGCGGAGGAGGCTGTCATGACGTTCGAC
GAAGTTCGGCAAATCGTGCT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 459; Mature: 458

Protein sequence:

>459_residues
MTQIRTPAWRPVRLGRSIVIDRLRTSRVFYGWYVVAAAFAVTFVGFGSAYTFSAFVEPLQRDFAASRGQISLVFSLAGFL
YFGFGIVSGPLADRFGSRRLAVVGMLLTAAGLAAAGAARTLLQVYAAYGLGVGFGVGCAYVPAVGAVQRWFVRRRGFASG
LAVAGIGVGTLVMPPLASALIAQVGWRGAYFALAVLAVVLGAGMSLLIENDPRGGGLLPDGDVTDPAADGASAPALDRGP
CAGPAPSDAAPRRSATDVPGAGATVREAVMSRPFASLYAACLVCSFGVFVPFVHLVPYAVDHGVAPAAAVLLLGAIGVGS
TAGRFFLGGLADRFGRRASLLAMFAGMAVALVAWAGAGTVATLAAFALVFGVFYGGWVAVLPAVVMDAFGGRNVSAIIGV
LYTSVAFGTLIGPAAAGFIYDAGGGYLVPILASAAANAIAFAIVATSGRTRAAARAAGG

Sequences:

>Translated_459_residues
MTQIRTPAWRPVRLGRSIVIDRLRTSRVFYGWYVVAAAFAVTFVGFGSAYTFSAFVEPLQRDFAASRGQISLVFSLAGFL
YFGFGIVSGPLADRFGSRRLAVVGMLLTAAGLAAAGAARTLLQVYAAYGLGVGFGVGCAYVPAVGAVQRWFVRRRGFASG
LAVAGIGVGTLVMPPLASALIAQVGWRGAYFALAVLAVVLGAGMSLLIENDPRGGGLLPDGDVTDPAADGASAPALDRGP
CAGPAPSDAAPRRSATDVPGAGATVREAVMSRPFASLYAACLVCSFGVFVPFVHLVPYAVDHGVAPAAAVLLLGAIGVGS
TAGRFFLGGLADRFGRRASLLAMFAGMAVALVAWAGAGTVATLAAFALVFGVFYGGWVAVLPAVVMDAFGGRNVSAIIGV
LYTSVAFGTLIGPAAAGFIYDAGGGYLVPILASAAANAIAFAIVATSGRTRAAARAAGG
>Mature_458_residues
TQIRTPAWRPVRLGRSIVIDRLRTSRVFYGWYVVAAAFAVTFVGFGSAYTFSAFVEPLQRDFAASRGQISLVFSLAGFLY
FGFGIVSGPLADRFGSRRLAVVGMLLTAAGLAAAGAARTLLQVYAAYGLGVGFGVGCAYVPAVGAVQRWFVRRRGFASGL
AVAGIGVGTLVMPPLASALIAQVGWRGAYFALAVLAVVLGAGMSLLIENDPRGGGLLPDGDVTDPAADGASAPALDRGPC
AGPAPSDAAPRRSATDVPGAGATVREAVMSRPFASLYAACLVCSFGVFVPFVHLVPYAVDHGVAPAAAVLLLGAIGVGST
AGRFFLGGLADRFGRRASLLAMFAGMAVALVAWAGAGTVATLAAFALVFGVFYGGWVAVLPAVVMDAFGGRNVSAIIGVL
YTSVAFGTLIGPAAAGFIYDAGGGYLVPILASAAANAIAFAIVATSGRTRAAARAAGG

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Homo sapiens, GI291621700, Length=404, Percent_Identity=25.990099009901, Blast_Score=125, Evalue=6e-29,
Organism=Homo sapiens, GI24431958, Length=454, Percent_Identity=25.7709251101322, Blast_Score=116, Evalue=5e-26,
Organism=Homo sapiens, GI114796626, Length=451, Percent_Identity=30.5986696230599, Blast_Score=115, Evalue=9e-26,
Organism=Homo sapiens, GI42475555, Length=402, Percent_Identity=26.865671641791, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI41327156, Length=448, Percent_Identity=26.3392857142857, Blast_Score=100, Evalue=3e-21,
Organism=Homo sapiens, GI262073007, Length=389, Percent_Identity=25.4498714652956, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI115583685, Length=389, Percent_Identity=25.4498714652956, Blast_Score=99, Evalue=1e-20,
Organism=Homo sapiens, GI109288012, Length=416, Percent_Identity=27.8846153846154, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI109288010, Length=416, Percent_Identity=27.8846153846154, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI4759112, Length=416, Percent_Identity=27.8846153846154, Blast_Score=97, Evalue=3e-20,
Organism=Homo sapiens, GI292781289, Length=447, Percent_Identity=22.5950782997763, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI40789261, Length=447, Percent_Identity=22.5950782997763, Blast_Score=97, Evalue=4e-20,
Organism=Homo sapiens, GI34916028, Length=458, Percent_Identity=23.3624454148472, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI4759114, Length=447, Percent_Identity=21.7002237136465, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI4759116, Length=162, Percent_Identity=27.7777777777778, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI23503293, Length=416, Percent_Identity=27.8846153846154, Blast_Score=67, Evalue=4e-11,
Organism=Escherichia coli, GI1789969, Length=392, Percent_Identity=25, Blast_Score=77, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17550316, Length=170, Percent_Identity=31.7647058823529, Blast_Score=90, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI115533486, Length=167, Percent_Identity=31.1377245508982, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI115533490, Length=167, Percent_Identity=31.1377245508982, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI115533488, Length=167, Percent_Identity=31.1377245508982, Blast_Score=81, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17568977, Length=158, Percent_Identity=31.6455696202532, Blast_Score=81, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI32567122, Length=143, Percent_Identity=32.1678321678322, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17557434, Length=143, Percent_Identity=32.1678321678322, Blast_Score=75, Evalue=8e-14,
Organism=Saccharomyces cerevisiae, GI6324453, Length=169, Percent_Identity=30.7692307692308, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI281360217, Length=192, Percent_Identity=32.2916666666667, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI28573971, Length=192, Percent_Identity=32.2916666666667, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI19923028, Length=165, Percent_Identity=33.3333333333333, Blast_Score=83, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24639306, Length=239, Percent_Identity=28.4518828451883, Blast_Score=82, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24585866, Length=160, Percent_Identity=26.875, Blast_Score=72, Evalue=8e-13,
Organism=Drosophila melanogaster, GI281361096, Length=123, Percent_Identity=35.7723577235772, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI161077961, Length=123, Percent_Identity=35.7723577235772, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24652823, Length=178, Percent_Identity=26.4044943820225, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI19922230, Length=171, Percent_Identity=29.2397660818713, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24653578, Length=171, Percent_Identity=29.2397660818713, Blast_Score=69, Evalue=8e-12,
Organism=Drosophila melanogaster, GI24653581, Length=171, Percent_Identity=29.2397660818713, Blast_Score=69, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46390; Mature: 46259

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQIRTPAWRPVRLGRSIVIDRLRTSRVFYGWYVVAAAFAVTFVGFGSAYTFSAFVEPLQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
RDFAASRGQISLVFSLAGFLYFGFGIVSGPLADRFGSRRLAVVGMLLTAAGLAAAGAART
HHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LLQVYAAYGLGVGFGVGCAYVPAVGAVQRWFVRRRGFASGLAVAGIGVGTLVMPPLASAL
HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHHHHHHHHHH
IAQVGWRGAYFALAVLAVVLGAGMSLLIENDPRGGGLLPDGDVTDPAADGASAPALDRGP
HHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CAGPAPSDAAPRRSATDVPGAGATVREAVMSRPFASLYAACLVCSFGVFVPFVHLVPYAV
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DHGVAPAAAVLLLGAIGVGSTAGRFFLGGLADRFGRRASLLAMFAGMAVALVAWAGAGTV
HCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCHH
ATLAAFALVFGVFYGGWVAVLPAVVMDAFGGRNVSAIIGVLYTSVAFGTLIGPAAAGFIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCEE
DAGGGYLVPILASAAANAIAFAIVATSGRTRAAARAAGG
ECCCCCHHHHHHHHHHHHHEEEEEECCCCHHHHHHCCCC
>Mature Secondary Structure 
TQIRTPAWRPVRLGRSIVIDRLRTSRVFYGWYVVAAAFAVTFVGFGSAYTFSAFVEPLQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH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ECCCCCHHHHHHHHHHHHHEEEEEECCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]